Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq15 109 5e-19 seq5 93.3 4e-14 >seq15 Length=722239 Score = 109 bits (120), Expect = 5e-19 Identities = 145/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| || |||||||| || ||||| ||| || ||| | | | || || |||||||||| Sbjct 457068 GGTTGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA-TCTTCTAGCTGCTTGC 457126 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || ||||||||||| || ||||||||||||||||| ||||| || Sbjct 457127 CAGCGAAGATAAGACGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGAATCTTCGACT 457186 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | ||||| | | |||||| || | |||| || || || ||||| | Sbjct 457187 TCACATTGTCGATGGTGTCTGAAGACTCCACCTCCAAAGTGATCGTCTTACCCGTCAGGG 457246 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 457247 TCTTAACGAAGATCTGCAT 457265 Score = 105 bits (116), Expect = 6e-18 Identities = 142/195 (73%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| || |||||||| || ||||| ||| || ||| | | | || ||||| | Sbjct 457290 ATGGAGGGTTGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA-TCTTCGAGTT 457348 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 | ||||| ||| | || | || ||||||||||||||||| ||||||||||| |||| Sbjct 457349 GTTTGCCGGCGAAGATCAAACGTTGCTGGTCGGGAGGGATTCCTTCCTTGTCTTGAATCT 457408 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 || ||| | | || | |||||| | | ||| || || | ||||| ||| ||||| | Sbjct 457409 TTGACTTCACATTGTCGATCGTGTCTGACGACTCGACCTCCAAGGTGATGGTCTTGCCAG 457468 Query 133636 TCAGAGTTTTTACGA 133650 | ||||| || |||| Sbjct 457469 TGAGAGTCTTGACGA 457483 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527 ||| ||||| || ||||| |||| || || | | | ||||| ||||| || || ||| Sbjct 456846 CTCCTTCTGAATGTTGTAGTCGCTCAATGTACGGCCA-TCCTCCAGCTGTTTACCAGCGA 456904 Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587 | || | |||||||||||| || ||||| || |||||||| |||||| |||| | Sbjct 456905 AGATCAACCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCTTGGATCTTGGATTTGACAT 456964 Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647 || | || |||| || || || || | |||| || |||||||||||||| || | Sbjct 456965 TGTCGATGGTATCGGAGGATTCAACTTCTAGTGTGATCGTCTTGCCGGTCAGAGTCTTGA 457024 Query 133648 CGAAAATCTGCAT 133660 |||| || ||||| Sbjct 457025 CGAAGATTTGCAT 457037 Score = 96.9 bits (106), Expect = 3e-15 Identities = 128/176 (73%), Gaps = 4/176 (2%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTG 133520 |||||| |||||||| || ||||||||| | ||| || || || || ||||||||| Sbjct 457587 GGTGGATTCTTTCTGGATGTTGTAATCGGAGAGCGTCCGGCCG--TCTTCAAGCTGCTTG 457644 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || ||| | || | ||||||||||| ||||| || |||||||| || ||||| | Sbjct 457645 CCAGCGAAGATCAAGCGCTGCTGGTCAGGAGGAATTCCTTCCTTATCCTGAATCTTGCTC 457704 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 |||| | || | ||||| | | ||| || || | ||||| ||| |||||||| Sbjct 457705 TTGACGTTGTCGATGGTGTCAGATGACTCAACCTCAAGGGTGATGGTCTTGCCGGT 457760 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| |||||||| || ||| | || | ||||||||||| |||||||| || ||||| Sbjct 456655 TCCTCCAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCTGGAGGGATACCCTCCTTA 456714 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| |||| | |||| ||| || | | || || |||| ||| | Sbjct 456715 TCTTGAATCTTTGATTTGACGTTGTCAATCGTATCAGAAGATTCGACCTCGAGGGTAATC 456774 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || |||||||| || ||||| |||||||| Sbjct 456775 GTTTTCCCAGTCAGAGTCTTGACGAAGATCTGCAT 456809 >seq5 Length=849029 Score = 93.3 bits (102), Expect = 4e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||||||||||||||| ||| | || | |||||||| || || || || || ||||| Sbjct 477727 TCCTCGAGCTGCTTGCCAGCGAAGATTAAACGCTGCTGATCCGGGGGAATTCCCTCCTTA 477786 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | |||||| ||| ||| || || | ||||| | Sbjct 477787 TCCTGGATCTTCGACTTGACATTGTCGATTGTGTCGCTGGACTCGACCTCAAGGGTGATG 477846 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAA 133651 || ||||| ||||| || || ||||| Sbjct 477847 GTCTTGCCCGTCAGGGTCTTGACGAA 477872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483419778773560