Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq57 127 3e-24 seq2 125 1e-23 >seq57 Length=16334 Score = 127 bits (140), Expect = 3e-24 Identities = 420/651 (65%), Gaps = 2/651 (0%) Strand=Plus/Minus Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTT 69654 || || ||||| || | ||| || |||| || || | || || || | || | | | Sbjct 16291 ACCCGCTTCATGAACAAATCCGGGGTCCATAGRGCGAGGAATAGGTCACGGGCGCGAACT 16232 Query 69655 TCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 69714 ||||| || || || ||| || ||||||||||| | | ||||| |||||| || Sbjct 16231 TCTTCTTTGCCGTGGTTCTTTCGTAGGTCGAGAAACTCGAACACATCAGCATGCCAAGGC 16172 Query 69715 TCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCA 69774 || ||||| || || | | || || || || || || || || || | ||||||||| Sbjct 16171 TCAAGATAGATAGCAAAAGCACCTGGACGCTTGTTGCCACCTTGGTCGACGTATCTGGCG 16112 Query 69775 GTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAA 69834 || || || | || | |||||||||| ||||| || || |||||| ||||| || Sbjct 16111 GTATTGTTGAACACGCGAAGCATCGGAACGATACCGTTGGAGGAACCATTAGTTCCTGAG 16052 Query 69835 ATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTA 69894 || || ||| | ||||| || || ||||| || || || || | || Sbjct 16051 ATGTATGAACCTGTGGCGCGGATGCGGTGGATGTTGAGACCAATACCACCAGCGGTCTTG 15992 Query 69895 GAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATG 69954 ||||| | |||||| ||||| ||||| || ||||| || ||||| || || ||||| Sbjct 15991 GAGATCATGGCACAAGTCTTCAAGGTGTCGTASATACCTTCAATGCTGTCTTCCTTCATG 15932 Query 69955 TTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGA 70014 | | || || ||| | | || || || || ||||| || | || || Sbjct 15931 TCGATGAGGAAGCAGGAGGCAAGCTGCGCATTAGGCGTCCCAGCATTGAAAAGAGTGGGT 15872 Query 70015 GATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATA 70074 || || |||||||| | | || | || || |||||||| || || || ||| Sbjct 15871 GAGGCATGAGTGAAATGCCTGTTGGACATCAAGTTATATGTTTCGATTGCCCCTTGGATA 15812 Query 70075 TC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGT 70133 || ||| | || || | | || || ||||| | ||| ||||| || ||||| || Sbjct 15811 TCTTCACCG-TGGATCTCCACTGCCACCCGCATGATCATGTGCTGTGGGCGTTCAACAAC 15753 Query 70134 TTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA 70193 | |||| || | || ||| || || ||||| || |||||||| || | ||| Sbjct 15752 CTGCTTATCCATACGAAGCAAGTACGAACGCTCAAGAGTCTTGAACCCAAAGTATTGGTA 15693 Query 70194 TGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTT 70244 ||||||| ||||| | || |||| || || | |||| || ||| Sbjct 15692 GTTGAAGTCTCGGTCGTAGACGATCGCAGAGTTAAGCTCATCCGAATGTTT 15642 >seq2 Length=1065396 Score = 125 bits (138), Expect = 1e-23 Identities = 304/456 (67%), Gaps = 6/456 (1%) Strand=Plus/Plus Query 39313 CATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTC 39372 ||| || ||| ||||| || ||||| || | |||||||| || || || |||||| | Sbjct 668607 CATGACGCCCGCCTTTTGATAGTCACCGACCCTCTTCTCGAAGAAGTTGGTCTTGCCTGC 668666 Query 39373 CAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCC 39432 |||||| ||| | |||||||| || || ||||| | | || || | ||| | || Sbjct 668667 CAATGAGATACTCTCCATGAAGTCGAAAGGATTGGCCGAATGGTAGTGTTTCTGGTTGCC 668726 Query 39433 TAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATT 39492 | | | || | ||| ||||| || || |||||| ||||||| | |||| Sbjct 668727 AAGCGCAACGAGCAGGCGATCAGCAACGAACTCGATGTATTGCTTCATCAAGTTGGAATT 668786 Query 39493 CATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGAT-GTCTACGG 39551 ||| |||| || | ||| |||||||| || | ||| | | ||||| ||| || | Sbjct 668787 CATCCCTAGCAGAGCACATGGCAGAGCCTCAGTCAAAAATTTCTGCTCGATCGTC-ACAG 668845 Query 39552 CCTCTGTTATTAT--CGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAA 39609 |||| || || || ||| || | || | || || | | || || || Sbjct 668846 CCTCGGTGATAATAGCGAGAATAGCAGCT--TGGCTGGGGCGGTTTCTCAAGTGCGAGAA 668903 Query 39610 CATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAA 39669 | || || || |||||| ||| | |||||||| | ||| | |||||| || || Sbjct 668904 GAGCAAACAAGCAAAGTCAGTATGCATCCCCTCATCACGTGAAATGAGTTCGTTCGAGAA 668963 Query 39670 TGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGA 39729 | ||||||||||| || |||||||| || |||||||| |||| ||| || || ||| Sbjct 668964 AGACAGTCCAGGCATGAGGCCACGCTTCTTAAGCCAAAAGATGGAAGCGAACGAGCCACT 669023 Query 39730 AAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAG 39765 |||||||| || || || || ||||| || || || Sbjct 669024 GAAGAAGATACCCTCCACAGCCGCAAAAGCGACGAG 669059 Score = 120 bits (132), Expect = 4e-22 Identities = 182/257 (71%), Gaps = 3/257 (1%) Strand=Plus/Plus Query 39914 TCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATT 39973 || ||||||||||| || ||| ||||| || ||||| ||||| | || |||| ||| Sbjct 669264 TCAGAATGGATGTTCTCCATCATAATCTGGAACCCGTAGAAACAGCGCGCCTCAGGAATC 669323 Query 39974 TGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCA 40033 || |||||| | |||||||| | | ||| || ||||| || || ||| ||| || Sbjct 669324 TGAACCTCTCCGCTGAATCTTTCGACAAGATTCTCGTTCACGATGCCGTCAGAAGCAGCG 669383 Query 40034 AAAAATGCCAATACATGTTTAATAAAATATTTTTCATCG--GGTGTCAAT-TTATTCCAG 40090 || || || | ||||| || || || |||||| | || | ||||||||| Sbjct 669384 AAGAAGGCAAGGACATGAGATATGAAGTAGCGTTCATCATCGTTGAGACGGTTATTCCAG 669443 Query 40091 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTT 40150 || | || ||||| || | ||| | |||||||| |||||||| || ||||| ||||| Sbjct 669444 TCGTGGAGGTCTTTGGAAAGATCGATCTCTTCAGCAGTCCAAAAGGATGCCTCGGCCTTC 669503 Query 40151 TTGTACATGTTCCATAT 40167 || ||||| | |||||| Sbjct 669504 TTATACATCTGCCATAT 669520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686907348905160