Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03-
01] 169 sequences; 23,712,134 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq57 127 3e-24
seq2 125 1e-23
>seq57
Length=16334
Score = 127 bits (140), Expect = 3e-24
Identities = 420/651 (65%), Gaps = 2/651 (0%)
Strand=Plus/Minus
Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTT 69654
|| || ||||| || | ||| || |||| || || | || || || | || | | |
Sbjct 16291 ACCCGCTTCATGAACAAATCCGGGGTCCATAGRGCGAGGAATAGGTCACGGGCGCGAACT 16232
Query 69655 TCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 69714
||||| || || || ||| || ||||||||||| | | ||||| |||||| ||
Sbjct 16231 TCTTCTTTGCCGTGGTTCTTTCGTAGGTCGAGAAACTCGAACACATCAGCATGCCAAGGC 16172
Query 69715 TCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCA 69774
|| ||||| || || | | || || || || || || || || || | |||||||||
Sbjct 16171 TCAAGATAGATAGCAAAAGCACCTGGACGCTTGTTGCCACCTTGGTCGACGTATCTGGCG 16112
Query 69775 GTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAA 69834
|| || || | || | |||||||||| ||||| || || |||||| ||||| ||
Sbjct 16111 GTATTGTTGAACACGCGAAGCATCGGAACGATACCGTTGGAGGAACCATTAGTTCCTGAG 16052
Query 69835 ATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTA 69894
|| || ||| | ||||| || || ||||| || || || || | ||
Sbjct 16051 ATGTATGAACCTGTGGCGCGGATGCGGTGGATGTTGAGACCAATACCACCAGCGGTCTTG 15992
Query 69895 GAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATG 69954
||||| | |||||| ||||| ||||| || ||||| || ||||| || || |||||
Sbjct 15991 GAGATCATGGCACAAGTCTTCAAGGTGTCGTASATACCTTCAATGCTGTCTTCCTTCATG 15932
Query 69955 TTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGA 70014
| | || || ||| | | || || || || ||||| || | || ||
Sbjct 15931 TCGATGAGGAAGCAGGAGGCAAGCTGCGCATTAGGCGTCCCAGCATTGAAAAGAGTGGGT 15872
Query 70015 GATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATA 70074
|| || |||||||| | | || | || || |||||||| || || || |||
Sbjct 15871 GAGGCATGAGTGAAATGCCTGTTGGACATCAAGTTATATGTTTCGATTGCCCCTTGGATA 15812
Query 70075 TC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGT 70133
|| ||| | || || | | || || ||||| | ||| ||||| || ||||| ||
Sbjct 15811 TCTTCACCG-TGGATCTCCACTGCCACCCGCATGATCATGTGCTGTGGGCGTTCAACAAC 15753
Query 70134 TTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA 70193
| |||| || | || ||| || || ||||| || |||||||| || | |||
Sbjct 15752 CTGCTTATCCATACGAAGCAAGTACGAACGCTCAAGAGTCTTGAACCCAAAGTATTGGTA 15693
Query 70194 TGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTT 70244
||||||| ||||| | || |||| || || | |||| || |||
Sbjct 15692 GTTGAAGTCTCGGTCGTAGACGATCGCAGAGTTAAGCTCATCCGAATGTTT 15642
>seq2
Length=1065396
Score = 125 bits (138), Expect = 1e-23
Identities = 304/456 (67%), Gaps = 6/456 (1%)
Strand=Plus/Plus
Query 39313 CATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTC 39372
||| || ||| ||||| || ||||| || | |||||||| || || || |||||| |
Sbjct 668607 CATGACGCCCGCCTTTTGATAGTCACCGACCCTCTTCTCGAAGAAGTTGGTCTTGCCTGC 668666
Query 39373 CAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCC 39432
|||||| ||| | |||||||| || || ||||| | | || || | ||| | ||
Sbjct 668667 CAATGAGATACTCTCCATGAAGTCGAAAGGATTGGCCGAATGGTAGTGTTTCTGGTTGCC 668726
Query 39433 TAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATT 39492
| | | || | ||| ||||| || || |||||| ||||||| | ||||
Sbjct 668727 AAGCGCAACGAGCAGGCGATCAGCAACGAACTCGATGTATTGCTTCATCAAGTTGGAATT 668786
Query 39493 CATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGAT-GTCTACGG 39551
||| |||| || | ||| |||||||| || | ||| | | ||||| ||| || |
Sbjct 668787 CATCCCTAGCAGAGCACATGGCAGAGCCTCAGTCAAAAATTTCTGCTCGATCGTC-ACAG 668845
Query 39552 CCTCTGTTATTAT--CGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAA 39609
|||| || || || ||| || | || | || || | | || || ||
Sbjct 668846 CCTCGGTGATAATAGCGAGAATAGCAGCT--TGGCTGGGGCGGTTTCTCAAGTGCGAGAA 668903
Query 39610 CATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAA 39669
| || || || |||||| ||| | |||||||| | ||| | |||||| || ||
Sbjct 668904 GAGCAAACAAGCAAAGTCAGTATGCATCCCCTCATCACGTGAAATGAGTTCGTTCGAGAA 668963
Query 39670 TGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGA 39729
| ||||||||||| || |||||||| || |||||||| |||| ||| || || |||
Sbjct 668964 AGACAGTCCAGGCATGAGGCCACGCTTCTTAAGCCAAAAGATGGAAGCGAACGAGCCACT 669023
Query 39730 AAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAG 39765
|||||||| || || || || ||||| || || ||
Sbjct 669024 GAAGAAGATACCCTCCACAGCCGCAAAAGCGACGAG 669059
Score = 120 bits (132), Expect = 4e-22
Identities = 182/257 (71%), Gaps = 3/257 (1%)
Strand=Plus/Plus
Query 39914 TCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATT 39973
|| ||||||||||| || ||| ||||| || ||||| ||||| | || |||| |||
Sbjct 669264 TCAGAATGGATGTTCTCCATCATAATCTGGAACCCGTAGAAACAGCGCGCCTCAGGAATC 669323
Query 39974 TGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCA 40033
|| |||||| | |||||||| | | ||| || ||||| || || ||| ||| ||
Sbjct 669324 TGAACCTCTCCGCTGAATCTTTCGACAAGATTCTCGTTCACGATGCCGTCAGAAGCAGCG 669383
Query 40034 AAAAATGCCAATACATGTTTAATAAAATATTTTTCATCG--GGTGTCAAT-TTATTCCAG 40090
|| || || | ||||| || || || |||||| | || | |||||||||
Sbjct 669384 AAGAAGGCAAGGACATGAGATATGAAGTAGCGTTCATCATCGTTGAGACGGTTATTCCAG 669443
Query 40091 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTT 40150
|| | || ||||| || | ||| | |||||||| |||||||| || ||||| |||||
Sbjct 669444 TCGTGGAGGTCTTTGGAAAGATCGATCTCTTCAGCAGTCCAAAAGGATGCCTCGGCCTTC 669503
Query 40151 TTGTACATGTTCCATAT 40167
|| ||||| | ||||||
Sbjct 669504 TTATACATCTGCCATAT 669520
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686907348905160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |