Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03-
01] 169 sequences; 23,712,134 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq30 96.9 3e-15
seq2 87.8 1e-12
>seq30
Length=326874
Score = 96.9 bits (106), Expect = 3e-15
Identities = 271/415 (65%), Gaps = 11/415 (3%)
Strand=Plus/Plus
Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488
|||||| | | || ||||| ||| || | || |||||||| ||||| || || || ||
Sbjct 219309 CCCAAAGTAATCAACGGTCCGGAAGTCCTCAACAAATATGTCGGTCAGTCAGAGGAGAAC 219368
Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAA-AGTTC 19547
| || |||||||| ||||| ||| ||| | | || | | || | | ||
Sbjct 219369 ATTCGGAAATTGTTTGCCGACGCAGAA-AAGGAGTACAAGGAGAAAGGAGATGAGAGCGG 219427
Query 19548 TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTGGTGT 19607
|||||||| || || | || || | || || ||||||| || ||||| ||| |
Sbjct 219428 ATTGCACATCATCATCTTCGACGAGCTTGATGCGGTCTGTAAACAGAGAGGGAGTGGAGC 219487
Query 19608 A---------AATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGG 19658
| |||||| |||| ||| || || || | || || || | |||||
Sbjct 219488 TGGCGGCGGTACTGGAGTCGGAGACAGTGTCGTAAACCAGTTGCTCTCGAAGCTCGACGG 219547
Query 19659 TGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGA 19718
|||| | || ||||||||||| | | ||||||||||| ||| | |||| | || ||
Sbjct 219548 TGTTGATCAGCTGAATAATATCCTCTTGATTGGCATGACCAATCGTATGGACATGATCGA 219607
Query 19719 CAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGA 19778
| || | | || || || || |||||| | | || || ||| |||||| |||||
Sbjct 219608 CGATGCACTGCTCCGTCCAGGACGTTTGGAAGTCCACATGGAGATTTCCTTACCGGATGA 219667
Query 19779 ATGTGGACGTGTGGAAATTTTAAACATACATACATCAACCATGCGACAAAATAAC 19833
| ||| || | ||||| | || ||||| ||| ||| ||| ||||| |||
Sbjct 219668 ACATGGCCGACAGCAAATTCTCAAAATACACACAGCAAAGATGATGCAAAACAAC 219722
>seq2
Length=1065396
Score = 87.8 bits (96), Expect = 1e-12
Identities = 342/524 (65%), Gaps = 24/524 (5%)
Strand=Plus/Minus
Query 44076 ATAAAGCAGACTGGGCCCTTAAATGGATA-AATTCAAATGATT---CTTTTGGAGAACGA 44131
|||| |||||||||||| | ||||||| || |||| ||| | || | | ||||
Sbjct 669118 ATAAGGCAGACTGGGCCATCCGATGGATACAAGACAAA-AATTCGACCTTCGCACAACGC 669060
Query 44132 CTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTT 44191
|| ||||| ||||| | |||||| || || ||||| || ||||| || |||| |||
Sbjct 669059 CTCGTCGCTTTTGCGGCTGTGGAGGGTATCTTCTTCAGTGGCTCGTTCGCTTCCATCTTT 669000
Query 44192 TGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGT 44251
||| | ||||| || || | |||||||| || | || || || || | || |||
Sbjct 668999 TGGCTTAAGAAGCGTGGCCTCATGCCTGGACTGTCTTTCTCGAACGAACTCATTTCACGT 668940
Query 44252 GATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGATATCTAGGAGACGATAAG 44311
||||| || | ||| || |||||||| ||| | || ||| | | || ||
Sbjct 668939 GATGAGGGGATGCATACTGACTTTGCTTGTTTGCT-CT------TCTCGCACTTGAGAAA 668887
Query 44312 C--CTTCATGTAAG--ACAATTACAGATATTGTTGTAGAGGCAGTAAAGATAGAACAAGA 44367
| | || ||| | ||| | |||| | ||||| || | ||| || || |
Sbjct 668886 CCGCCCCAGCCAAGCTGCTATTCTCGCTATTATCACCGAGGCTGTGACGATCGAGCAGAA 668827
Query 44368 ATTTATGACAACAGCATTACC-TGTAAATTTAATAGGAATGAAT--GAACTTTTGATGAA 44424
|||| |||| || | || ||| | | |||| |||||| ||| ||||||||
Sbjct 668826 ATTTTTGACTGAGGCTCTGCCATGT-GCTCTGCTAGGGATGAATTCCAAC--TTGATGAA 668770
Query 44425 CCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGTTGCGATAAACACTA 44484
||||| || || | | |||| ||||| | || | | || || | | ||||||||
Sbjct 668769 GCAATACATCGAGTTCGTTGCTGATCGCCTGCTCGTTGCGCTTGGCAACCAGAAACACTA 668710
Query 44485 -TATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACT 44543
||| | || || || || || ||||| | ||| || |||| |||||| || ||||
Sbjct 668709 CCATTCGGC-CAATCCTTTCGACTTCATGGAGAGTATCTCATTGGCAGGCAAGACCAACT 668651
Query 44544 TTTTTGAAAAACGCGTTGGAGAATATCAGCGAATGGGCGTCATG 44587
| || || || | || || || ||||| ||||||||||
Sbjct 668650 TCTTCGAGAAGAGGGTCGGTGACTATCAAAAGGCGGGCGTCATG 668607
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455181364845
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |