Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq30 96.9 3e-15 seq2 87.8 1e-12 >seq30 Length=326874 Score = 96.9 bits (106), Expect = 3e-15 Identities = 271/415 (65%), Gaps = 11/415 (3%) Strand=Plus/Plus Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488 |||||| | | || ||||| ||| || | || |||||||| ||||| || || || || Sbjct 219309 CCCAAAGTAATCAACGGTCCGGAAGTCCTCAACAAATATGTCGGTCAGTCAGAGGAGAAC 219368 Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAA-AGTTC 19547 | || |||||||| ||||| ||| ||| | | || | | || | | || Sbjct 219369 ATTCGGAAATTGTTTGCCGACGCAGAA-AAGGAGTACAAGGAGAAAGGAGATGAGAGCGG 219427 Query 19548 TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTGGTGT 19607 |||||||| || || | || || | || || ||||||| || ||||| ||| | Sbjct 219428 ATTGCACATCATCATCTTCGACGAGCTTGATGCGGTCTGTAAACAGAGAGGGAGTGGAGC 219487 Query 19608 A---------AATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGG 19658 | |||||| |||| ||| || || || | || || || | ||||| Sbjct 219488 TGGCGGCGGTACTGGAGTCGGAGACAGTGTCGTAAACCAGTTGCTCTCGAAGCTCGACGG 219547 Query 19659 TGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGA 19718 |||| | || ||||||||||| | | ||||||||||| ||| | |||| | || || Sbjct 219548 TGTTGATCAGCTGAATAATATCCTCTTGATTGGCATGACCAATCGTATGGACATGATCGA 219607 Query 19719 CAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGA 19778 | || | | || || || || |||||| | | || || ||| |||||| ||||| Sbjct 219608 CGATGCACTGCTCCGTCCAGGACGTTTGGAAGTCCACATGGAGATTTCCTTACCGGATGA 219667 Query 19779 ATGTGGACGTGTGGAAATTTTAAACATACATACATCAACCATGCGACAAAATAAC 19833 | ||| || | ||||| | || ||||| ||| ||| ||| ||||| ||| Sbjct 219668 ACATGGCCGACAGCAAATTCTCAAAATACACACAGCAAAGATGATGCAAAACAAC 219722 >seq2 Length=1065396 Score = 87.8 bits (96), Expect = 1e-12 Identities = 342/524 (65%), Gaps = 24/524 (5%) Strand=Plus/Minus Query 44076 ATAAAGCAGACTGGGCCCTTAAATGGATA-AATTCAAATGATT---CTTTTGGAGAACGA 44131 |||| |||||||||||| | ||||||| || |||| ||| | || | | |||| Sbjct 669118 ATAAGGCAGACTGGGCCATCCGATGGATACAAGACAAA-AATTCGACCTTCGCACAACGC 669060 Query 44132 CTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTT 44191 || ||||| ||||| | |||||| || || ||||| || ||||| || |||| ||| Sbjct 669059 CTCGTCGCTTTTGCGGCTGTGGAGGGTATCTTCTTCAGTGGCTCGTTCGCTTCCATCTTT 669000 Query 44192 TGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGT 44251 ||| | ||||| || || | |||||||| || | || || || || | || ||| Sbjct 668999 TGGCTTAAGAAGCGTGGCCTCATGCCTGGACTGTCTTTCTCGAACGAACTCATTTCACGT 668940 Query 44252 GATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGATATCTAGGAGACGATAAG 44311 ||||| || | ||| || |||||||| ||| | || ||| | | || || Sbjct 668939 GATGAGGGGATGCATACTGACTTTGCTTGTTTGCT-CT------TCTCGCACTTGAGAAA 668887 Query 44312 C--CTTCATGTAAG--ACAATTACAGATATTGTTGTAGAGGCAGTAAAGATAGAACAAGA 44367 | | || ||| | ||| | |||| | ||||| || | ||| || || | Sbjct 668886 CCGCCCCAGCCAAGCTGCTATTCTCGCTATTATCACCGAGGCTGTGACGATCGAGCAGAA 668827 Query 44368 ATTTATGACAACAGCATTACC-TGTAAATTTAATAGGAATGAAT--GAACTTTTGATGAA 44424 |||| |||| || | || ||| | | |||| |||||| ||| |||||||| Sbjct 668826 ATTTTTGACTGAGGCTCTGCCATGT-GCTCTGCTAGGGATGAATTCCAAC--TTGATGAA 668770 Query 44425 CCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGTTGCGATAAACACTA 44484 ||||| || || | | |||| ||||| | || | | || || | | |||||||| Sbjct 668769 GCAATACATCGAGTTCGTTGCTGATCGCCTGCTCGTTGCGCTTGGCAACCAGAAACACTA 668710 Query 44485 -TATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACT 44543 ||| | || || || || || ||||| | ||| || |||| |||||| || |||| Sbjct 668709 CCATTCGGC-CAATCCTTTCGACTTCATGGAGAGTATCTCATTGGCAGGCAAGACCAACT 668651 Query 44544 TTTTTGAAAAACGCGTTGGAGAATATCAGCGAATGGGCGTCATG 44587 | || || || | || || || ||||| |||||||||| Sbjct 668650 TCTTCGAGAAGAGGGTCGGTGACTATCAAAAGGCGGGCGTCATG 668607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455181364845