Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq57 127 3e-24 seq26 122 1e-22 seq82 113 6e-20 seq2 105 8e-18 >seq57 Length=16334 Score = 127 bits (140), Expect = 3e-24 Identities = 354/543 (65%), Gaps = 25/543 (5%) Strand=Plus/Minus Query 111556 CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCG 111615 ||| |||||||||||||| | || || |||| || | || || || | || Sbjct 16295 CTCGACCCGCTTCATGAACAAATCCGGGGTCCATAGRGCGAGGAATAGGTCACGGGCGCG 16236 Query 111616 AGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCA 111675 | | ||||| | || ||||| ||||| || || ||||| | | ||| || ||||| Sbjct 16235 AACTTCTTCTTTGCCGTGGTTCTTTCGTAGGTCGAGAAACTCGAACACATCAGCATGCCA 16176 Query 111676 TGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATA 111729 ||||||||||||| || | || || | ||||| ||| |||| | || || Sbjct 16175 AGGCTCAAGATAGATAGCAAAAGCACC---TGGACGCTTGTTGCCACCTTGGTCGACGTA 16119 Query 111730 GCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT 111789 | || || ||| || ||||||||||| |||| ||||| | || |||||| || Sbjct 16118 TCTGGCGGTATTGTTGAACACGCGAAGCATCGGAACGATACCGTTGGAGGAACCATTAGT 16059 Query 111790 CCCCCGAATACGAGATTTAT-------TGGCTCTCACATCATGGATGTGCATCCCAATAC 111842 || ||||| ||| |||| | | ||||||| | ||||||| Sbjct 16058 TCCT-------GAGATGTATGAACCTGTGGCGCGGATGCGGTGGATGTTGAGACCAATAC 16006 Query 111843 CCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTG 111902 | ||||| ||| ||||| ||||| | | | || | || ||||| | || Sbjct 16005 CACCAGCGGTCTTGGAGATCATGGCACAAGTCTTCAAGGTGTCGTASATACCTTCAATGC 15946 Query 111903 AGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCAT 111962 ||| ||||| || |||| |||||||| || | ||||| | || || ||||||| Sbjct 15945 TGTCTTCCTTCATGTCGATGAGGAAGCAGGAGGCAAGCTGCGCATTAGGCGTCCCAGCAT 15886 Query 111963 TGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCC 112021 |||| || || |||| || ||| |||| || ||| | ||||||| || ||||| || Sbjct 15885 TGAAAAGAGTGGGTGAGGCATGAGTGAA-ATGCCTGTTGGACATCAAGTTATATGTTTCG 15827 Query 112022 AAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGT 112081 | | | || ||||| |||||||| | | ||| |||||||||| ||||| |||| Sbjct 15826 ATTGCCCCTTGGATATCTTCACCGTGGATCTCCACTGCCACCCGCATGATCATGTGCTGT 15767 Query 112082 GGG 112084 ||| Sbjct 15766 GGG 15764 >seq26 Length=513936 Score = 122 bits (134), Expect = 1e-22 Identities = 168/232 (72%), Gaps = 16/232 (7%) Strand=Plus/Minus Query 11630 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTT------CGCGGGCGATTTCA 11683 |||||||||||||||||||| | ||| || || ||||| | ||||||| Sbjct 306343 GCATCAATCTCATCAATGAAAATAATGCAAGGCGCATTTTTCTTCGCTCGGGCGA----- 306289 Query 11684 AAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCG--G 11741 |||||||||| || || | ||| ||||||||||||||||| || || | | | | Sbjct 306288 -AGAGATCGCGCACTCTCGAAGGACCAACACCAACAAACATCTCGACGAACTCAGAGCCG 306230 Query 11742 CAGAGCACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCT 11801 | || | ||| | ||| ||||| |||||||||||| ||||| ||| || | ||||| Sbjct 306229 CTGA-CGCTGAA-GAAAGGGACTCCAGATTCACCCGCGGTGGCTTTGGCTAGCAAGGTCT 306172 Query 11802 TTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC 11853 | || ||||| || ||| | ||||| ||| ||||| || ||||||||||| Sbjct 306171 TACCTGTACCAGGTGGACCAGAGAGAATGGCACCTCGAGGAATCTTGGCACC 306120 >seq82 Length=10320 Score = 113 bits (124), Expect = 6e-20 Identities = 579/901 (64%), Gaps = 32/901 (4%) Strand=Plus/Minus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGC-GGTGG 110765 ||||||||| | ||||||||| || ||||| || || |||| || | | | ||| Sbjct 885 GTAGATGTTGGATGTGTATGGCTCGAAGCACTCGTTGAATCCCA-GAATCATACTGGTAC 827 Query 110766 AGGCTGTTGGCATTGGTGCCATCAA--AAGACTGTTACGAAGACCCTTCTCCTTGATGCG 110823 ||| || ||||| ||||| | ||| ||| ||||| | || ||| | | | || Sbjct 826 TGGCGGTCGGCATGGGTGCAA-CAAGCAAG-CTGTTCCTAACACCATGCGCTGCAATCTC 769 Query 110824 TTCCTTGAGAACATCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATGTCAAAC 110881 |||||| | ||||||| || | | | | | || | || |||| |||||||| || Sbjct 768 TTCCTTCAATGCATCCCAATCCCAAAGGTCTG-TCGGGGTGACATTCC-ACATGTCATAC 711 Query 110882 TGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCA 110941 || || | ||||| || | ||||| |||||| | | || || | || | | ||| Sbjct 710 TGCAGAATGCCTTGAGATACAGGAGATCCCTCATACGACTCGTACGGGCC--GAGTTTCT 653 Query 110942 --GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCAT 110999 || | |||||| || |||||| ||||| || || || || ||||| || || Sbjct 652 TGGCAAGCTCACAGGAAGCTGTCAGGGACGCGTGGTAGATAGTCTCGAAGATCTGAATAT 593 Query 111000 TCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAA-ATAAATACATCCGCG 111058 ||| || ||| || | ||||| || | | || ||| | | ||| | || || Sbjct 592 TCAACTGCTTCGCCTGCGGAGAATCGAAAG-GAAGACGCAGAGCCAGGAATGCGTCAGCC 534 Query 111059 AGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA 111118 ||||| || ||||| | ||||||| |||||||| | || ||| | || ||| Sbjct 533 AGACCCTGGACACCTACTGCAATAGGCCTGTGTCGGAAGTTGCTCTT---CTTAGCCTCT 477 Query 111119 ---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTG 111175 || || || ||| || || | ||| | || ||| |||| || ||| Sbjct 476 GGGACTGGGTAGTGATTGACATCGATAATCTTGTTCAAGTTCTTGACCACAACCTGGGTG 417 Query 111176 ATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGG 111235 | || || ||||| | | ||| | || | | ||| || | | || || Sbjct 416 ACCTCGTGTAGTTTGCCGAAGTCATAGACGCCGTTGACAGCATCAACGAAGGTAGGCAGA 357 Query 111236 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 111295 ||||| || || | ||||| ||||| |||||| | ||||| || | ||||| Sbjct 356 GCGATCGAAGCAAGGTTGCACACAGCAACCTCATCTGGGGCAGTGTATTCGACGATTTCC 297 Query 111296 GTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCAC 111355 || || | ||||| || || || || | ||| || ||||| ||||| |||||| Sbjct 296 GTGCAGAGATTGGAGCTTCGGATAGTACCAAGATTTTTCTGGTTGCTCTTGCGGTTGCAA 237 Query 111356 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTC 111415 ||||||||||| |||||| |||| | || ||||| || || | || ||||| || | | Sbjct 236 GCATCCTTGTAAAGCATGAAGGGGTTTCCGGTCTCTGTTTGAGCTTCCAGAATTGCGTAC 177 Query 111416 CA-AACATCGGCGGC--TGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTG 111472 || | | || | ||| || || | ||| | | || || ||| || ||||| | Sbjct 176 CACAGCTTCTG-GGCTTTGATAGATGTGCG--GCCACGGCCTTCCTTTTCATACTTCTCG 120 Query 111473 TAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAG 111532 || |||||||| || || || || | |||||| ||||| || |||| | || ||| Sbjct 119 TAAAGGGCTTCGAATTCATCGCCATACACGTCGGCCAGACCAGGAGCCTCATTGGGGCAG 60 Query 111533 AAAAGAGACCATTGACCACCTTC--CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACA 111590 || || | ||| | || ||| ||| |||||||||||||| | || || |||| | Sbjct 59 AAGAGTGTCCAAT--CCTGATTCTTCTCGACCCGCTTCATGAACAAATCCGGGGTCCATA 2 Query 111591 G 111591 | Sbjct 1 G 1 >seq2 Length=1065396 Score = 105 bits (116), Expect = 8e-18 Identities = 153/212 (72%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 122677 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTC 122736 |||||||| || ||||| ||||| || ||||| | || || |||||||| || |||||| Sbjct 668932 CCCTCATCACGTGAAATGAGTTCGTTCGAGAAAGACAGTCCAGGCATGAGGCCACGCTTC 668991 Query 122737 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 122796 || | |||| | || | ||| || || ||||||||||||||||||| |||||| Sbjct 668992 TTAAGCCAAAAGATGGAAGCGAACGAGCCACTGAAGAAGATACCCTCCACAGCCGCAAAA 669051 Query 122797 GCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-CATCAAACCATTTCATTGCCCATTT 122855 || | ||||||| ||||||| ||| |||| | | | |||| || ||||| | Sbjct 669052 GCGACGAGGCGTTGTGCGAAGG-TCGAATTTTTGTCTTGTATCCATCGGATGGCCCAGTC 669110 Query 122856 CGCCTTCTTCTCAATACATGGTACAGT-TTGG 122886 ||||| || ||| ||||| || || |||| Sbjct 669111 TGCCTTATTACGAATGCATGGAACTGTATTGG 669142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628030673282400