Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03-
01] 169 sequences; 23,712,134 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq57 127 3e-24
seq26 122 1e-22
seq82 113 6e-20
seq2 105 8e-18
>seq57
Length=16334
Score = 127 bits (140), Expect = 3e-24
Identities = 354/543 (65%), Gaps = 25/543 (5%)
Strand=Plus/Minus
Query 111556 CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCG 111615
||| |||||||||||||| | || || |||| || | || || || | ||
Sbjct 16295 CTCGACCCGCTTCATGAACAAATCCGGGGTCCATAGRGCGAGGAATAGGTCACGGGCGCG 16236
Query 111616 AGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCA 111675
| | ||||| | || ||||| ||||| || || ||||| | | ||| || |||||
Sbjct 16235 AACTTCTTCTTTGCCGTGGTTCTTTCGTAGGTCGAGAAACTCGAACACATCAGCATGCCA 16176
Query 111676 TGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATA 111729
||||||||||||| || | || || | ||||| ||| |||| | || ||
Sbjct 16175 AGGCTCAAGATAGATAGCAAAAGCACC---TGGACGCTTGTTGCCACCTTGGTCGACGTA 16119
Query 111730 GCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT 111789
| || || ||| || ||||||||||| |||| ||||| | || |||||| ||
Sbjct 16118 TCTGGCGGTATTGTTGAACACGCGAAGCATCGGAACGATACCGTTGGAGGAACCATTAGT 16059
Query 111790 CCCCCGAATACGAGATTTAT-------TGGCTCTCACATCATGGATGTGCATCCCAATAC 111842
|| ||||| ||| |||| | | ||||||| | |||||||
Sbjct 16058 TCCT-------GAGATGTATGAACCTGTGGCGCGGATGCGGTGGATGTTGAGACCAATAC 16006
Query 111843 CCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTG 111902
| ||||| ||| ||||| ||||| | | | || | || ||||| | ||
Sbjct 16005 CACCAGCGGTCTTGGAGATCATGGCACAAGTCTTCAAGGTGTCGTASATACCTTCAATGC 15946
Query 111903 AGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCAT 111962
||| ||||| || |||| |||||||| || | ||||| | || || |||||||
Sbjct 15945 TGTCTTCCTTCATGTCGATGAGGAAGCAGGAGGCAAGCTGCGCATTAGGCGTCCCAGCAT 15886
Query 111963 TGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCC 112021
|||| || || |||| || ||| |||| || ||| | ||||||| || ||||| ||
Sbjct 15885 TGAAAAGAGTGGGTGAGGCATGAGTGAA-ATGCCTGTTGGACATCAAGTTATATGTTTCG 15827
Query 112022 AAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGT 112081
| | | || ||||| |||||||| | | ||| |||||||||| ||||| ||||
Sbjct 15826 ATTGCCCCTTGGATATCTTCACCGTGGATCTCCACTGCCACCCGCATGATCATGTGCTGT 15767
Query 112082 GGG 112084
|||
Sbjct 15766 GGG 15764
>seq26
Length=513936
Score = 122 bits (134), Expect = 1e-22
Identities = 168/232 (72%), Gaps = 16/232 (7%)
Strand=Plus/Minus
Query 11630 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTT------CGCGGGCGATTTCA 11683
|||||||||||||||||||| | ||| || || ||||| | |||||||
Sbjct 306343 GCATCAATCTCATCAATGAAAATAATGCAAGGCGCATTTTTCTTCGCTCGGGCGA----- 306289
Query 11684 AAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCG--G 11741
|||||||||| || || | ||| ||||||||||||||||| || || | | | |
Sbjct 306288 -AGAGATCGCGCACTCTCGAAGGACCAACACCAACAAACATCTCGACGAACTCAGAGCCG 306230
Query 11742 CAGAGCACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCT 11801
| || | ||| | ||| ||||| |||||||||||| ||||| ||| || | |||||
Sbjct 306229 CTGA-CGCTGAA-GAAAGGGACTCCAGATTCACCCGCGGTGGCTTTGGCTAGCAAGGTCT 306172
Query 11802 TTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC 11853
| || ||||| || ||| | ||||| ||| ||||| || |||||||||||
Sbjct 306171 TACCTGTACCAGGTGGACCAGAGAGAATGGCACCTCGAGGAATCTTGGCACC 306120
>seq82
Length=10320
Score = 113 bits (124), Expect = 6e-20
Identities = 579/901 (64%), Gaps = 32/901 (4%)
Strand=Plus/Minus
Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGC-GGTGG 110765
||||||||| | ||||||||| || ||||| || || |||| || | | | |||
Sbjct 885 GTAGATGTTGGATGTGTATGGCTCGAAGCACTCGTTGAATCCCA-GAATCATACTGGTAC 827
Query 110766 AGGCTGTTGGCATTGGTGCCATCAA--AAGACTGTTACGAAGACCCTTCTCCTTGATGCG 110823
||| || ||||| ||||| | ||| ||| ||||| | || ||| | | | ||
Sbjct 826 TGGCGGTCGGCATGGGTGCAA-CAAGCAAG-CTGTTCCTAACACCATGCGCTGCAATCTC 769
Query 110824 TTCCTTGAGAACATCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATGTCAAAC 110881
|||||| | ||||||| || | | | | | || | || |||| |||||||| ||
Sbjct 768 TTCCTTCAATGCATCCCAATCCCAAAGGTCTG-TCGGGGTGACATTCC-ACATGTCATAC 711
Query 110882 TGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCA 110941
|| || | ||||| || | ||||| |||||| | | || || | || | | |||
Sbjct 710 TGCAGAATGCCTTGAGATACAGGAGATCCCTCATACGACTCGTACGGGCC--GAGTTTCT 653
Query 110942 --GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCAT 110999
|| | |||||| || |||||| ||||| || || || || ||||| || ||
Sbjct 652 TGGCAAGCTCACAGGAAGCTGTCAGGGACGCGTGGTAGATAGTCTCGAAGATCTGAATAT 593
Query 111000 TCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAA-ATAAATACATCCGCG 111058
||| || ||| || | ||||| || | | || ||| | | ||| | || ||
Sbjct 592 TCAACTGCTTCGCCTGCGGAGAATCGAAAG-GAAGACGCAGAGCCAGGAATGCGTCAGCC 534
Query 111059 AGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA 111118
||||| || ||||| | ||||||| |||||||| | || ||| | || |||
Sbjct 533 AGACCCTGGACACCTACTGCAATAGGCCTGTGTCGGAAGTTGCTCTT---CTTAGCCTCT 477
Query 111119 ---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTG 111175
|| || || ||| || || | ||| | || ||| |||| || |||
Sbjct 476 GGGACTGGGTAGTGATTGACATCGATAATCTTGTTCAAGTTCTTGACCACAACCTGGGTG 417
Query 111176 ATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGG 111235
| || || ||||| | | ||| | || | | ||| || | | || ||
Sbjct 416 ACCTCGTGTAGTTTGCCGAAGTCATAGACGCCGTTGACAGCATCAACGAAGGTAGGCAGA 357
Query 111236 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 111295
||||| || || | ||||| ||||| |||||| | ||||| || | |||||
Sbjct 356 GCGATCGAAGCAAGGTTGCACACAGCAACCTCATCTGGGGCAGTGTATTCGACGATTTCC 297
Query 111296 GTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCAC 111355
|| || | ||||| || || || || | ||| || ||||| ||||| ||||||
Sbjct 296 GTGCAGAGATTGGAGCTTCGGATAGTACCAAGATTTTTCTGGTTGCTCTTGCGGTTGCAA 237
Query 111356 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTC 111415
||||||||||| |||||| |||| | || ||||| || || | || ||||| || | |
Sbjct 236 GCATCCTTGTAAAGCATGAAGGGGTTTCCGGTCTCTGTTTGAGCTTCCAGAATTGCGTAC 177
Query 111416 CA-AACATCGGCGGC--TGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTG 111472
|| | | || | ||| || || | ||| | | || || ||| || ||||| |
Sbjct 176 CACAGCTTCTG-GGCTTTGATAGATGTGCG--GCCACGGCCTTCCTTTTCATACTTCTCG 120
Query 111473 TAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAG 111532
|| |||||||| || || || || | |||||| ||||| || |||| | || |||
Sbjct 119 TAAAGGGCTTCGAATTCATCGCCATACACGTCGGCCAGACCAGGAGCCTCATTGGGGCAG 60
Query 111533 AAAAGAGACCATTGACCACCTTC--CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACA 111590
|| || | ||| | || ||| ||| |||||||||||||| | || || |||| |
Sbjct 59 AAGAGTGTCCAAT--CCTGATTCTTCTCGACCCGCTTCATGAACAAATCCGGGGTCCATA 2
Query 111591 G 111591
|
Sbjct 1 G 1
>seq2
Length=1065396
Score = 105 bits (116), Expect = 8e-18
Identities = 153/212 (72%), Gaps = 3/212 (1%)
Strand=Plus/Plus
Query 122677 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTC 122736
|||||||| || ||||| ||||| || ||||| | || || |||||||| || ||||||
Sbjct 668932 CCCTCATCACGTGAAATGAGTTCGTTCGAGAAAGACAGTCCAGGCATGAGGCCACGCTTC 668991
Query 122737 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 122796
|| | |||| | || | ||| || || ||||||||||||||||||| ||||||
Sbjct 668992 TTAAGCCAAAAGATGGAAGCGAACGAGCCACTGAAGAAGATACCCTCCACAGCCGCAAAA 669051
Query 122797 GCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-CATCAAACCATTTCATTGCCCATTT 122855
|| | ||||||| ||||||| ||| |||| | | | |||| || ||||| |
Sbjct 669052 GCGACGAGGCGTTGTGCGAAGG-TCGAATTTTTGTCTTGTATCCATCGGATGGCCCAGTC 669110
Query 122856 CGCCTTCTTCTCAATACATGGTACAGT-TTGG 122886
||||| || ||| ||||| || || ||||
Sbjct 669111 TGCCTTATTACGAATGCATGGAACTGTATTGG 669142
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628030673282400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |