Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq82 145 9e-30 seq26 102 1e-16 >seq82 Length=10320 Score = 145 bits (160), Expect = 9e-30 Identities = 795/1247 (64%), Gaps = 36/1247 (3%) Strand=Plus/Minus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 || ||||||||||| |||||||| || || ||||||| || | ||||| | Sbjct 1229 CGTAGGTAGTACATGCCCGTCTTAAGACCAAGCTTCCACCCAGCGAAGTGCATGCTCGTG 1170 Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA- 117955 | |||| | ||| || || |||| | ||| | | ||| || ||||| ||||| Sbjct 1169 ATCTTGCCCATGGTGGGTTCTTTCATGTGAATGTTGAGAGATTGAGACTGATCAATGAAC 1110 Query 117956 GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTT---GATTTCCCACACAGT 118012 ||| || ||||| || ||||| | || || || | | || ||||||||| ||||| Sbjct 1109 GCG-CCACGATCAGCGGCCATCTGAA-CA-ATGGTGCG-CTGAGAGATTTCCCAGACAGT 1054 Query 118013 CCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGC 118072 | ||||||| ||| | || | ||||||| || |||||||| || ||||| | Sbjct 1053 CTTGTAGAGCGCCTTGAGGTCGGCAGGGATATTGGGAATGTTTTGGATTGAACCACCATC 994 Query 118073 CTTGACCATGAGA---TCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTC 118129 | | |||| | | |||||| | | |||||| ||||| || | ||||||| Sbjct 993 ---GGCAATGATACGGTTCTTCATGTTATCTGACCATAGACCCATGTCAACAAGATCCTT 937 Query 118130 CACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATAT 118188 || || ||||| || ||||| || || ||| || | ||| ||||| | Sbjct 936 CAGAAGCCAGGGGTTGACGACTTGGAACTCTCCGGCAAGGACACGGCG-AGAGTAGATGT 878 Query 118189 TGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTG-TGGAGGCTGTG 118247 ||| ||||||||||| |||||||| ||| |||| || | ||| | ||| || Sbjct 877 TGGATGTGTATGGCTCGAAGCACTCGTTGAATCCCA-GAATCATACTGGTACTGGCGGTC 819 Query 118248 GGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGA 118307 ||||||||||| | || | |||||| | | ||| | | ||| |||||| | Sbjct 818 GGCATGGGTGCAACAAGCAAGCTGTTCCTAACACCATGCGCTGCAATCTCTTCCTTCAAT 759 Query 118308 GCGTCCCAGTCGTAGTTGAGCTTTGTCTCCC---CCTGCCACATATCAAACTGGAGGATA 118364 || ||||| || | || | |||| | | |||||| ||| |||| || || Sbjct 758 GCATCCCAATCCCAA---AGGTCTGTCGGGGTGACATTCCACATGTCATACTGCAGAATG 702 Query 118365 CCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG 118424 ||||| || | || ||||||||| | | ||| || ||||| || || | || Sbjct 701 CCTTGAGATACAGGAGATCCCTCATACGACTCGTACGGGCCGAGTTTCTTGGCAAGCTCA 642 Query 118425 GAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTG 118484 || || |||| ||||| || || || || || || || ||||| ||| Sbjct 641 CAGGAAGCTGTCAGGGACGCGTGGTAGATAGTCTCGAAGATCTGAATATTCAACTGCTTC 582 Query 118485 GCCTCGTCGGAATCAAACGCGAGTCGGCACAAA-ATAAATACATCCGCGAGACCTTGGAC 118543 |||| ||||| || | || || || | | ||| | || || ||||| ||||| Sbjct 581 GCCTGCGGAGAATCGAAAGGAAGACG-CAGAGCCAGGAATGCGTCAGCCAGACCCTGGAC 523 Query 118544 ACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC-ACGGGATAAA 118602 ||| | |||| || | |||| | || |||| ||| ||| || || || Sbjct 522 ACCTACTGCAATAGGCCTGTGTCGGAAGTTGCTCTTCTTAGCC-TCTGGGACTGGGTAGT 464 Query 118603 AATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCT 118662 ||| |||||||| | | || | || ||| ||||||| |||| || || || | Sbjct 463 GATTGACATCGATAATCTTGTTCAAGTTCTTGACCACAACCTGGGTGACCTCGTGTAGTT 404 Query 118663 TTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCA 118722 | || | ||| | || | | ||| || | |||| || ||||| || || | Sbjct 403 TGCCGAAGTCATAGACGCCGTTGACAGCATCAACGAAGGTAGGCAGAGCGATCGAAGCAA 344 Query 118723 GATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTG 118782 | || ||||||| |||||| ||||||| || | ||||||||||| | || | Sbjct 343 GGTTGCACACAGCAACCTCATCTGGGGCAGTGTATTCGACGATTTCCGTGCAGAGATTGG 284 Query 118783 AACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAA 118842 | || || || || | || || || || ||| ||| || ||||||||||||| Sbjct 283 AGCTTCGGATAGTACCAAGATTTTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAAA 224 Query 118843 GCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCA 118901 ||||| | || | || ||||| ||||| | | ||||| || | ||| | | || | Sbjct 223 GCATGAAGGGGTTTCCGGTCTCTGTTTGAGCTTCCAGAATTGCGTACCACAGCTTCTG-G 165 Query 118902 GCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAAC 118961 ||| | || | | | | || || || | || ||||| ||| |||||||| || Sbjct 164 GCTTTGATAGATGTGCGGCCACGGCCTTCCTTTTCATACTTCTCGTAAAGGGCTTCGAAT 105 Query 118962 TCTTCACC---CACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCAT 119018 || || || |||| || | || || || |||| || ||||||||||| | ||| Sbjct 104 TCATCGCCATACACG---TCGGCCAGACCAGGAGCCTCATTGGGGCAGAAGAGTGTCCAA 48 Query 119019 TGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAG 119065 | | || ||| |||||||||||||| | || ||| |||| || Sbjct 47 TCCTGATTCTTCTCGACCCGCTTCATGAACAAATCCGGGGTCCATAG 1 >seq26 Length=513936 Score = 102 bits (112), Expect = 1e-16 Identities = 165/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 14233 CTTACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAAC 14292 ||| || | ||| ||||| ||||| ||||||| || || || ||||| || Sbjct 306353 CTTTCCAATGGCATCAATCTCATCAATGAAAATAATGCAAGGCGCATTTTTCTTCGCTCG 306294 Query 14293 TTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGC 14352 | |||| ||| ||||||||| | ||| ||||| ||||||||||| || || | | Sbjct 306293 GGCGAAGAGATCGCGCACTCTCGAAGGACCAACACCAACAAACATCTCGACGAACTCAGA 306234 Query 14353 GGCGGA-ACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGG 14411 | || || || | ||| ||||| ||||||||||||| ||||| ||| || | || Sbjct 306233 GCCGCTGACGCTGAA-GAAAGGGACTCCAGATTCACCCGCGGTGGCTTTGGCTAGCAAGG 306175 Query 14412 TCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 14466 |||| || || || ||| || | ||||| |||||| || || ||| ||||||| Sbjct 306174 TCTTACCTGTACCAGGTGGACCAGAGAGAATGGCACCTCGAGGAATCTTGGCACC 306120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618433893555640