Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03-
01] 169 sequences; 23,712,134 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq82 140 4e-28
seq26 116 4e-21
seq2 104 3e-17
>seq82
Length=10320
Score = 140 bits (154), Expect = 4e-28
Identities = 255/367 (69%), Gaps = 10/367 (3%)
Strand=Plus/Plus
Query 104714 CTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTT 104773
|| |||| || ||| | ||||||||| | || ||| ||| | ||||| | |||||
Sbjct 1 CTATGGACCCCGGATTTGTTCATGAAGCGGGTCGAGAAGAATCAGGATTGGACACTCTTC 60
Query 104774 TGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTG---GGTGAGGAGTTTGAAGCCCTT 104830
|| || | |||| |||||||| |||| |||| || || || || |||||||||
Sbjct 61 TGCCCCAATGAGGCTCCTGGTCTGGCCGA---CGTGTATGGCGATGAATTCGAAGCCCTT 117
Query 104831 TACACAAAGTACGAGGAAGAAGGTCG-GGCGACTGCGACGGTGCCAGCTGCCGATG-TGT 104888
||| ||||| || | ||||| || ||| | | | | ||| | || | |||
Sbjct 118 TACGAGAAGTATGAAAAGGAAGGCCGTGGCCGCA-CATCTATCAAAGCC-CAGAAGCTGT 175
Query 104889 GGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACG 104948
|| | || ||||| | ||||||| ||||| || | || | |||||||||||| || |
Sbjct 176 GGTACGCAATTCTGGAAGCTCAAACAGAGACCGGAAACCCCTTCATGCTTTACAAGGATG 235
Query 104949 CCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTA 105008
| || |||| ||||| || || || ||| | ||| ||| || ||||||||||| |
Sbjct 236 CTTGCAACCGCAAGAGCAACCAGAAAAATCTTGGTACTATCCGAAGCTCCAATCTCTGCA 295
Query 105009 CAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCG 105068
| |||||| | |||| || | | ||||||| |||||||| ||||| || || ||||
Sbjct 296 CGGAAATCGTCGAATACACTGCCCCAGATGAGGTTGCTGTGTGCAACCTTGCTTCGATCG 355
Query 105069 CTCTCCC 105075
|||| ||
Sbjct 356 CTCTGCC 362
>seq26
Length=513936
Score = 116 bits (128), Expect = 4e-21
Identities = 225/326 (69%), Gaps = 21/326 (6%)
Strand=Plus/Minus
Query 9614 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9673
||||||||||| || ||||| | ||||| | ||| || || || ||||| | ||
Sbjct 306436 AAACCATCCATTTCCGTCAAGATCTGGTTGAGAGTGGCCTCTCGCTCGTCATTACC--GC 306379
Query 9674 ATACCACCAGCACTGCGTTG-------CTTTCCCACGGCATCAATCTCATCAATGAAGAC 9726
|||| || |||| | | |||||| | ||||||||||||||||||||| |
Sbjct 306378 -CACCA-AAGTTCTGCTTGGCTCTTGACTTTCCAATGGCATCAATCTCATCAATGAAAAT 306321
Query 9727 GATGCATGG----TTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGC 9782
||||| || || | ||||| | | | |||||||| || || | | | |
Sbjct 306320 AATGCAAGGCGCATTTTTCTTCGCTCGGG----CGAAGAGATCGCGCACTCTCGAAGGAC 306265
Query 9783 CCACACCAACAAACATCTCCACAAAGTTTGCGGCG-GAACATTGGATGAAGGGGACATTA 9841
| ||||||||||||||||| || || | | | || || | || ||| ||||| |
Sbjct 306264 CAACACCAACAAACATCTCGACGAACTCAGAGCCGCTGACGCT-GAAGAAAGGGACTCCA 306206
Query 9842 GATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGG 9901
||||||||||| ||||| ||| || | |||||||| ||||| || ||| | |||
Sbjct 306205 GATTCACCCGCGGTGGCTTTGGCTAGCAAGGTCTTACCTGTACCAGGTGGACCAGAGAGA 306146
Query 9902 AGGGCACCTCGTGGAATCTTGGCGCC 9927
| ||||||||| ||||||||||| ||
Sbjct 306145 ATGGCACCTCGAGGAATCTTGGCACC 306120
>seq2
Length=1065396
Score = 104 bits (114), Expect = 3e-17
Identities = 153/214 (71%), Gaps = 7/214 (3%)
Strand=Plus/Minus
Query 94728 CCAA-ACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATA 94783
|||| |||||||| || |||| || || || || ||||| || ||| | || |
Sbjct 669142 CCAATACAGTTCCATGCATTCGTAATAAGGCAGACTGGGCCATCCGATGGATACAAGACA 669083
Query 94784 CAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCT 94843
||| ||| |||| || | || ||| |||| |||||| ||| |||||||||||||
Sbjct 669082 AAAATTCGA---CCTTCGCACAACGCCTCGTCGCTTTTGCGGCTGTGGAGGGTATCTTCT 669026
Query 94844 TCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCT 94903
|| ||| || ||| | || | |||||| |||||||| || |||||||| || || |
Sbjct 669025 TCAGTGGCTCGTTCGCTTCCATCTTTTGGCTTAAGAAGCGTGGCCTCATGCCTGGACTGT 668966
Query 94904 GCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 94937
||||| ||||| || || || ||||| |||||
Sbjct 668965 CTTTCTCGAACGAACTCATTTCACGTGATGAGGG 668932
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583259567861560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |