Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq82 140 4e-28 seq26 116 4e-21 seq2 104 3e-17 >seq82 Length=10320 Score = 140 bits (154), Expect = 4e-28 Identities = 255/367 (69%), Gaps = 10/367 (3%) Strand=Plus/Plus Query 104714 CTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTT 104773 || |||| || ||| | ||||||||| | || ||| ||| | ||||| | ||||| Sbjct 1 CTATGGACCCCGGATTTGTTCATGAAGCGGGTCGAGAAGAATCAGGATTGGACACTCTTC 60 Query 104774 TGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTG---GGTGAGGAGTTTGAAGCCCTT 104830 || || | |||| |||||||| |||| |||| || || || || ||||||||| Sbjct 61 TGCCCCAATGAGGCTCCTGGTCTGGCCGA---CGTGTATGGCGATGAATTCGAAGCCCTT 117 Query 104831 TACACAAAGTACGAGGAAGAAGGTCG-GGCGACTGCGACGGTGCCAGCTGCCGATG-TGT 104888 ||| ||||| || | ||||| || ||| | | | | ||| | || | ||| Sbjct 118 TACGAGAAGTATGAAAAGGAAGGCCGTGGCCGCA-CATCTATCAAAGCC-CAGAAGCTGT 175 Query 104889 GGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACG 104948 || | || ||||| | ||||||| ||||| || | || | |||||||||||| || | Sbjct 176 GGTACGCAATTCTGGAAGCTCAAACAGAGACCGGAAACCCCTTCATGCTTTACAAGGATG 235 Query 104949 CCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTA 105008 | || |||| ||||| || || || ||| | ||| ||| || ||||||||||| | Sbjct 236 CTTGCAACCGCAAGAGCAACCAGAAAAATCTTGGTACTATCCGAAGCTCCAATCTCTGCA 295 Query 105009 CAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCG 105068 | |||||| | |||| || | | ||||||| |||||||| ||||| || || |||| Sbjct 296 CGGAAATCGTCGAATACACTGCCCCAGATGAGGTTGCTGTGTGCAACCTTGCTTCGATCG 355 Query 105069 CTCTCCC 105075 |||| || Sbjct 356 CTCTGCC 362 >seq26 Length=513936 Score = 116 bits (128), Expect = 4e-21 Identities = 225/326 (69%), Gaps = 21/326 (6%) Strand=Plus/Minus Query 9614 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9673 ||||||||||| || ||||| | ||||| | ||| || || || ||||| | || Sbjct 306436 AAACCATCCATTTCCGTCAAGATCTGGTTGAGAGTGGCCTCTCGCTCGTCATTACC--GC 306379 Query 9674 ATACCACCAGCACTGCGTTG-------CTTTCCCACGGCATCAATCTCATCAATGAAGAC 9726 |||| || |||| | | |||||| | ||||||||||||||||||||| | Sbjct 306378 -CACCA-AAGTTCTGCTTGGCTCTTGACTTTCCAATGGCATCAATCTCATCAATGAAAAT 306321 Query 9727 GATGCATGG----TTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGC 9782 ||||| || || | ||||| | | | |||||||| || || | | | | Sbjct 306320 AATGCAAGGCGCATTTTTCTTCGCTCGGG----CGAAGAGATCGCGCACTCTCGAAGGAC 306265 Query 9783 CCACACCAACAAACATCTCCACAAAGTTTGCGGCG-GAACATTGGATGAAGGGGACATTA 9841 | ||||||||||||||||| || || | | | || || | || ||| ||||| | Sbjct 306264 CAACACCAACAAACATCTCGACGAACTCAGAGCCGCTGACGCT-GAAGAAAGGGACTCCA 306206 Query 9842 GATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGG 9901 ||||||||||| ||||| ||| || | |||||||| ||||| || ||| | ||| Sbjct 306205 GATTCACCCGCGGTGGCTTTGGCTAGCAAGGTCTTACCTGTACCAGGTGGACCAGAGAGA 306146 Query 9902 AGGGCACCTCGTGGAATCTTGGCGCC 9927 | ||||||||| ||||||||||| || Sbjct 306145 ATGGCACCTCGAGGAATCTTGGCACC 306120 >seq2 Length=1065396 Score = 104 bits (114), Expect = 3e-17 Identities = 153/214 (71%), Gaps = 7/214 (3%) Strand=Plus/Minus Query 94728 CCAA-ACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATA 94783 |||| |||||||| || |||| || || || || ||||| || ||| | || | Sbjct 669142 CCAATACAGTTCCATGCATTCGTAATAAGGCAGACTGGGCCATCCGATGGATACAAGACA 669083 Query 94784 CAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCT 94843 ||| ||| |||| || | || ||| |||| |||||| ||| ||||||||||||| Sbjct 669082 AAAATTCGA---CCTTCGCACAACGCCTCGTCGCTTTTGCGGCTGTGGAGGGTATCTTCT 669026 Query 94844 TCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCT 94903 || ||| || ||| | || | |||||| |||||||| || |||||||| || || | Sbjct 669025 TCAGTGGCTCGTTCGCTTCCATCTTTTGGCTTAAGAAGCGTGGCCTCATGCCTGGACTGT 668966 Query 94904 GCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 94937 ||||| ||||| || || || ||||| ||||| Sbjct 668965 CTTTCTCGAACGAACTCATTTCACGTGATGAGGG 668932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583259567861560