Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03-
01] 169 sequences; 23,712,134 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq15 138 3e-27
seq28 122 3e-22
seq17 107 6e-18
seq23 102 2e-16
>seq15
Length=722239
Score = 138 bits (152), Expect = 3e-27
Identities = 157/208 (75%), Gaps = 2/208 (1%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
||| || ||||| | | || ||||| ||||| || || ||||| || || || |||||
Sbjct 457554 CATGCCTCCACGCAGACGAAGGACAAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATC 457613
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || || |||||||| || || ||||| ||||| | || ||||| |||||
Sbjct 457614 GGAGAGCGTCCGGCCGTCTTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGG 457673
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685
|||||||||||| ||||||||||| || ||| || || || || || | ||||||| |
Sbjct 457674 AGGAATTCCTTCCTTATCCTGAATCTT-GCTCTTGACGTTGTCGATGGTGTCAGATGACT 457732
Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGT 140713
|||| ||||| || | ||||| |||||
Sbjct 457733 CAACCTCAAGGGTGATGGTCTTGCCGGT 457760
Score = 127 bits (140), Expect = 6e-24
Identities = 169/235 (72%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||||||||| | | || || || ||||| || || ||||| || || || |
Sbjct 457031 TTTGCATACCACCACGGAGACGGAGCACGAGGTGAAGGGTTGATTCTTTCTGGATGTTGT 457090
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || || | || || |||||||| || || || ||||| ||||| ||||| ||||| |
Sbjct 457091 AGTCGGACAGGGTGCGGCCATCTTCTAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGT 457150
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
|||| || || ||||| || |||||||| || | || ||||| || || | || || |
Sbjct 457151 CAGGCGGGATGCCTTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTGTCTGAAG 457210
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || | || | ||||| || || || || || || || ||||||||
Sbjct 457211 ACTCCACCTCCAAAGTGATCGTCTTACCCGTCAGGGTCTTAACGAAGATCTGCAT 457265
Score = 120 bits (132), Expect = 9e-22
Identities = 158/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || || ||||| || || || ||||| || || || || ||
Sbjct 457263 CATACCACCACGGAGACGGAGCACCAGATGGAGGGTTGATTCTTTCTGGATGTTGTAGTC 457322
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || |||||||| |||||||| || || ||||| | ||||||||| || ||
Sbjct 457323 GGACAGGGTGCGGCCATCTTCGAGTTGTTTGCCGGCGAAGATCAAACGTTGCTGGTCGGG 457382
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
||| |||||||| || || ||||| || | || ||||| || |||| || || | ||
Sbjct 457383 AGGGATTCCTTCCTTGTCTTGAATCTTTGACTTCACATTGTCGATCGTGTCTGACGACTC 457442
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725
|| || | || | ||||| || || || || || ||
Sbjct 457443 GACCTCCAAGGTGATGGTCTTGCCAGTGAGAGTCTTGAC 457481
Score = 114 bits (126), Expect = 4e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || || | || | ||| ||| || ||||| || || ||
Sbjct 456807 CATACCACCACGCAGACGAAGGACCAAGTGCAAAGTGCTCTCCTTCTGAATGTTGTAGTC 456866
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
||||| || ||||| || || ||||| ||||| ||||| | || ||||| || ||
Sbjct 456867 GCTCAATGTACGGCCATCCTCCAGCTGTTTACCAGCGAAGATCAACCGCTGCTGGTCTGG 456926
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|| || || || || || || || || | ||| ||||| || || | ||| || | |||
Sbjct 456927 TGGGATACCCTCCTTGTCTTGGATCTTGGATTTGACATTGTCGATGGTATCGGAGGATTC 456986
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|||||| ||||| | ||||| ||||| || || || || || || |||||
Sbjct 456987 AACTTCTAGTGTGATCGTCTTGCCGGTCAGAGTCTTGACGAAGATTTGCAT 457037
>seq28
Length=470712
Score = 122 bits (134), Expect = 3e-22
Identities = 245/358 (68%), Gaps = 4/358 (1%)
Strand=Plus/Minus
Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGA-AGCATATTT 349590
|| ||||| || || | |||||| | | |||||||||||| || || || ||| ||| |
Sbjct 127957 CCGGAAGAGATCTCCGCCATGGTTCTTGGTAAAATGAAGGAGATCGCGGAGAGC-TATCT 127899
Query 349591 AGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCG 349650
|| | | || || | || ||| | ||||| || |||||||| || || || || |
Sbjct 127898 TGGCAAGAAGGTCACCCACGCCGTTGTCACTGTTCCGGCCTATTTCAACGACGCTCAAAG 127839
Query 349651 TTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGA 349710
||||| || || ||||| | |||| | || | || ||||| | || | || ||
Sbjct 127838 GCAAGCAACTAAGGACGCTGGTACCATTTCTGGCCTGAACGTTCTCCGTATCGTCAACGA 127779
Query 349711 ACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTAT 349770
|| || || || || ||||| ||||| || || || | |||| | || ||| | |
Sbjct 127778 GCCAACGGCCGCCGCCATTGCGTATGGTCTGGACAAGACCGGTGAAGAGGAGAAACA-AG 127720
Query 349771 TCTTATTTTT-GATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGG 349829
|||| | | ||| | |||||||||||||| ||||| || || || | | || |||
Sbjct 127719 TCTTGGTGTACGATCTTGGTGGTGGTACTTTCGATGTCTCGCTCCTGTCCATCGACAAGG 127660
Query 349830 GAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGA 349887
| ||| |||||| |||||| || ||||| || || | || || |||||||| ||
Sbjct 127659 GTGCTTTCGAAGTTCTAGCAACAGCAGGTGACACTCACTTGGGAGGTGAAGATTTCGA 127602
>seq17
Length=698222
Score = 107 bits (118), Expect = 6e-18
Identities = 433/678 (64%), Gaps = 7/678 (1%)
Strand=Plus/Plus
Query 349251 ATGATCGTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTG 349310
|||| ||| | ||||| ||||| |||||||| || ||| | || || || || | ||| |
Sbjct 468558 ATGACCGTATCGAAATCATTGCCAATGATCAGGGAAACCGGACGACACCTTCCTTCGTGG 468617
Query 349311 CATTTACCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATC 349370
| || || || || |||||| |||| |||||| | || || || |||| || ||||
Sbjct 468618 CCTTCACGGACACCGAGCGTCTGATCGGTGATGCCGCGAAGAACCAAGTCGCCATGAATC 468677
Query 349371 CAAAAAATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA--CAAATC 349428
| || || | || || || ||||| | ||||| | | || | || | |
Sbjct 468678 CCGCGAACACAATCTTCGACGCCAAGCGGTTAATTGGCCGCAAATTCGCCGATGCTGAGG 468737
Query 349429 TACACAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACC 349488
| || | || | || || || || || | ||||| | | | || | || ||
Sbjct 468738 TGCAGG--CCGACATGAAGCACTTCCCGTTCAAAGTTGT--CGACCGG-GGCGGCAAGCC 468792
Query 349489 AATTATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATC 349548
| || |||| || | || || || || | || ||| || || || || |
Sbjct 468793 TGTCATCCAGGTCGAGTTCAAGGGCGAGACGAAGGAGTTCACACCTGAGGAGATCTCTGC 468852
Query 349549 AATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGA 349608
||||| | || |||| ||| | ||| ||| |||| | |||| || || | |
Sbjct 468853 CATGGTGCTCACCAAGATGAGGGAGACTGCCGAATCATACCTCGGTGGTACCGTCAACAA 468912
Query 349609 TGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGC 349668
|| || | || || || || || || || || | || ||| || || || || ||
Sbjct 468913 CGCCGTCGTCACAGTTCCCGCATACTTCAACGACTCGCAACGTCAAGCCACCAAGGACGC 468972
Query 349669 TGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAAT 349728
||| ||| || || || || ||||| | || || || ||||| || || || || ||
Sbjct 468973 TGGTCTCATCGCCGGTTTGAACGTTCTTCGTATCATCAACGAACCTACCGCCGCTGCCAT 469032
Query 349729 TGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGG 349788
||||| || ||||| || | | || || ||| | || || || ||| | ||
Sbjct 469033 CGCATACGGTCTTGACAAGAAGGCCGAAGGCGAGCGGAATGTCCTGATCTTCGATCTGGG 469092
Query 349789 TGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGC 349848
||||||||||| ||||| || || | || | || ||||| ||||| ||||| || |
Sbjct 469093 CGGTGGTACTTTCGATGTTTCTCTGTTGACCATCGAGGAGGGTATTTTCGAAGTCAAGTC 469152
Query 349849 AACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTT 349908
||||||||||| || || | ||||| || || || || || || | || || ||
Sbjct 469153 GACTGCTGGTGACACTCACTTGGGTGGTGAGGACTTCGACAACCGCTTGGTCAACCACTT 469212
Query 349909 TGTTAAAGAATTTAAGCG 349926
|| ||||||| || ||
Sbjct 469213 CGTCCAAGAATTCAAACG 469230
>seq23
Length=538764
Score = 102 bits (112), Expect = 2e-16
Identities = 400/618 (65%), Gaps = 17/618 (3%)
Strand=Plus/Minus
Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669
||||| ||||| || || || || || || || ||||||| | ||||| ||||||
Sbjct 523464 GCTGTCATTACGGTGCCCGCTTACTTCAACGACAACCAGCGTCAATCCACAAAGGATGCT 523405
Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729
|| |||||| || | || || || | || || || || ||||| ||||| || |||
Sbjct 523404 GGTGCCATTGCTGGCCTCAACGTCCTCCGTATCATCAACGAGCCCACGGCTGCTGCCATT 523345
Query 349730 GCATATGGGCTTGATAA---AATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTA 349786
|| ||||| |||| || | ||| | ||| ||| | || |||| ||| |
Sbjct 523344 GCTTATGGTCTTGGGTCCGGAAAGTCGGACAAGGAACGGAATGTGCTGATTTACGATCTG 523285
Query 349787 GGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGA-AGTTAA 349845
|| ||||||||||| ||||| || || || ||| | || | | |||| | ||||||
Sbjct 523284 GGCGGTGGTACTTTCGATGTGTCCCTTCTT-CACATTCAGGGTGGTGTTTTCACAGTTAA 523226
Query 349846 AGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCG-- 349903
|| ||||||||||| || || | ||||| | || ||||| | | | ||| |
Sbjct 523225 GGCCACTGCTGGTGACACTCACTTGGGTGGTCAGGACTTTGACA--CCAACCTTTTGGAA 523168
Query 349904 CATTTTGTTAAAGAATTTAAGCGTCAAG-CTAAAATTGATATTGGAGATAATCCTAGAGC 349962
|| || || || || |||| |||| | || | ||| || | | || || | ||
Sbjct 523167 CACTTCAAGAAGGAGTTCCAGCG-CAAGACGAAGAAGGATCTTTCCGGTGATGCTCGTGC 523109
Query 349963 AATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCA 350022
| ||||| || | ||||| || || ||||| |||||| || | || || | ||
Sbjct 523108 CCTCCGTCGGCTCCGGACTGCTTGCGAGCGTGCCAAGCGTACCCTGTCGAACGCTGCGCA 523049
Query 350023 AACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACG 350082
||| | | || || || ||||| |||||| | || ||| | || || ||
Sbjct 523048 AACTACCGTCGAGATCGACTCTCTCTTCGATGGCGAGGACTTCAACGCTCAGATCACCCG 522989
Query 350083 TGCTCGGTTTGAAGAATTATGTATG---GATCTTTTTAGAGCAACAATGGATCCTGTGGA 350139
|||||| || || || | || | | | || || || || |||| ||||| |
Sbjct 522988 TGCTCGTTTCGAGGA--TCTGAACGCCAAGGCCTTCCAGGGC-ACCTTGGACCCTGTCCA 522932
Query 350140 AAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGG 350199
|||| | |||||||| || || || || || |||| || | || | |||||
Sbjct 522931 GCAAGTCCTGAAAGATGCCAACATTGAAAAGAACAAGGTTGACGAGATTGTGCTTGTTGG 522872
Query 350200 TGGTTCTACACGTATTCC 350217
|||||| |||||||| ||
Sbjct 522871 TGGTTCCACACGTATCCC 522854
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515251119000707
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |