Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq15 138 3e-27 seq28 122 3e-22 seq17 107 6e-18 seq23 102 2e-16 >seq15 Length=722239 Score = 138 bits (152), Expect = 3e-27 Identities = 157/208 (75%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| || ||||| | | || ||||| ||||| || || ||||| || || || ||||| Sbjct 457554 CATGCCTCCACGCAGACGAAGGACAAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATC 457613 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || |||||||| || || ||||| ||||| | || ||||| ||||| Sbjct 457614 GGAGAGCGTCCGGCCGTCTTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGG 457673 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685 |||||||||||| ||||||||||| || ||| || || || || || | ||||||| | Sbjct 457674 AGGAATTCCTTCCTTATCCTGAATCTT-GCTCTTGACGTTGTCGATGGTGTCAGATGACT 457732 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGT 140713 |||| ||||| || | ||||| ||||| Sbjct 457733 CAACCTCAAGGGTGATGGTCTTGCCGGT 457760 Score = 127 bits (140), Expect = 6e-24 Identities = 169/235 (72%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || || ||||| || || ||||| || || || | Sbjct 457031 TTTGCATACCACCACGGAGACGGAGCACGAGGTGAAGGGTTGATTCTTTCTGGATGTTGT 457090 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || |||||||| || || || ||||| ||||| ||||| ||||| | Sbjct 457091 AGTCGGACAGGGTGCGGCCATCTTCTAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGT 457150 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||| || || ||||| || |||||||| || | || ||||| || || | || || | Sbjct 457151 CAGGCGGGATGCCTTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTGTCTGAAG 457210 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || | || | ||||| || || || || || || || |||||||| Sbjct 457211 ACTCCACCTCCAAAGTGATCGTCTTACCCGTCAGGGTCTTAACGAAGATCTGCAT 457265 Score = 120 bits (132), Expect = 9e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || ||||| || || || ||||| || || || || || Sbjct 457263 CATACCACCACGGAGACGGAGCACCAGATGGAGGGTTGATTCTTTCTGGATGTTGTAGTC 457322 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || |||||||| |||||||| || || ||||| | ||||||||| || || Sbjct 457323 GGACAGGGTGCGGCCATCTTCGAGTTGTTTGCCGGCGAAGATCAAACGTTGCTGGTCGGG 457382 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| |||||||| || || ||||| || | || ||||| || |||| || || | || Sbjct 457383 AGGGATTCCTTCCTTGTCTTGAATCTTTGACTTCACATTGTCGATCGTGTCTGACGACTC 457442 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 || || | || | ||||| || || || || || || Sbjct 457443 GACCTCCAAGGTGATGGTCTTGCCAGTGAGAGTCTTGAC 457481 Score = 114 bits (126), Expect = 4e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | || | ||| ||| || ||||| || || || Sbjct 456807 CATACCACCACGCAGACGAAGGACCAAGTGCAAAGTGCTCTCCTTCTGAATGTTGTAGTC 456866 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||||| || ||||| || || ||||| ||||| ||||| | || ||||| || || Sbjct 456867 GCTCAATGTACGGCCATCCTCCAGCTGTTTACCAGCGAAGATCAACCGCTGCTGGTCTGG 456926 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || || || || || || | ||| ||||| || || | ||| || | ||| Sbjct 456927 TGGGATACCCTCCTTGTCTTGGATCTTGGATTTGACATTGTCGATGGTATCGGAGGATTC 456986 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||||| ||||| | ||||| ||||| || || || || || || ||||| Sbjct 456987 AACTTCTAGTGTGATCGTCTTGCCGGTCAGAGTCTTGACGAAGATTTGCAT 457037 >seq28 Length=470712 Score = 122 bits (134), Expect = 3e-22 Identities = 245/358 (68%), Gaps = 4/358 (1%) Strand=Plus/Minus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGA-AGCATATTT 349590 || ||||| || || | |||||| | | |||||||||||| || || || ||| ||| | Sbjct 127957 CCGGAAGAGATCTCCGCCATGGTTCTTGGTAAAATGAAGGAGATCGCGGAGAGC-TATCT 127899 Query 349591 AGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCG 349650 || | | || || | || ||| | ||||| || |||||||| || || || || | Sbjct 127898 TGGCAAGAAGGTCACCCACGCCGTTGTCACTGTTCCGGCCTATTTCAACGACGCTCAAAG 127839 Query 349651 TTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGA 349710 ||||| || || ||||| | |||| | || | || ||||| | || | || || Sbjct 127838 GCAAGCAACTAAGGACGCTGGTACCATTTCTGGCCTGAACGTTCTCCGTATCGTCAACGA 127779 Query 349711 ACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTAT 349770 || || || || || ||||| ||||| || || || | |||| | || ||| | | Sbjct 127778 GCCAACGGCCGCCGCCATTGCGTATGGTCTGGACAAGACCGGTGAAGAGGAGAAACA-AG 127720 Query 349771 TCTTATTTTT-GATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGG 349829 |||| | | ||| | |||||||||||||| ||||| || || || | | || ||| Sbjct 127719 TCTTGGTGTACGATCTTGGTGGTGGTACTTTCGATGTCTCGCTCCTGTCCATCGACAAGG 127660 Query 349830 GAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGA 349887 | ||| |||||| |||||| || ||||| || || | || || |||||||| || Sbjct 127659 GTGCTTTCGAAGTTCTAGCAACAGCAGGTGACACTCACTTGGGAGGTGAAGATTTCGA 127602 >seq17 Length=698222 Score = 107 bits (118), Expect = 6e-18 Identities = 433/678 (64%), Gaps = 7/678 (1%) Strand=Plus/Plus Query 349251 ATGATCGTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTG 349310 |||| ||| | ||||| ||||| |||||||| || ||| | || || || || | ||| | Sbjct 468558 ATGACCGTATCGAAATCATTGCCAATGATCAGGGAAACCGGACGACACCTTCCTTCGTGG 468617 Query 349311 CATTTACCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATC 349370 | || || || || |||||| |||| |||||| | || || || |||| || |||| Sbjct 468618 CCTTCACGGACACCGAGCGTCTGATCGGTGATGCCGCGAAGAACCAAGTCGCCATGAATC 468677 Query 349371 CAAAAAATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA--CAAATC 349428 | || || | || || || ||||| | ||||| | | || | || | | Sbjct 468678 CCGCGAACACAATCTTCGACGCCAAGCGGTTAATTGGCCGCAAATTCGCCGATGCTGAGG 468737 Query 349429 TACACAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACC 349488 | || | || | || || || || || | ||||| | | | || | || || Sbjct 468738 TGCAGG--CCGACATGAAGCACTTCCCGTTCAAAGTTGT--CGACCGG-GGCGGCAAGCC 468792 Query 349489 AATTATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATC 349548 | || |||| || | || || || || | || ||| || || || || | Sbjct 468793 TGTCATCCAGGTCGAGTTCAAGGGCGAGACGAAGGAGTTCACACCTGAGGAGATCTCTGC 468852 Query 349549 AATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGA 349608 ||||| | || |||| ||| | ||| ||| |||| | |||| || || | | Sbjct 468853 CATGGTGCTCACCAAGATGAGGGAGACTGCCGAATCATACCTCGGTGGTACCGTCAACAA 468912 Query 349609 TGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGC 349668 || || | || || || || || || || || | || ||| || || || || || Sbjct 468913 CGCCGTCGTCACAGTTCCCGCATACTTCAACGACTCGCAACGTCAAGCCACCAAGGACGC 468972 Query 349669 TGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAAT 349728 ||| ||| || || || || ||||| | || || || ||||| || || || || || Sbjct 468973 TGGTCTCATCGCCGGTTTGAACGTTCTTCGTATCATCAACGAACCTACCGCCGCTGCCAT 469032 Query 349729 TGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGG 349788 ||||| || ||||| || | | || || ||| | || || || ||| | || Sbjct 469033 CGCATACGGTCTTGACAAGAAGGCCGAAGGCGAGCGGAATGTCCTGATCTTCGATCTGGG 469092 Query 349789 TGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGC 349848 ||||||||||| ||||| || || | || | || ||||| ||||| ||||| || | Sbjct 469093 CGGTGGTACTTTCGATGTTTCTCTGTTGACCATCGAGGAGGGTATTTTCGAAGTCAAGTC 469152 Query 349849 AACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTT 349908 ||||||||||| || || | ||||| || || || || || || | || || || Sbjct 469153 GACTGCTGGTGACACTCACTTGGGTGGTGAGGACTTCGACAACCGCTTGGTCAACCACTT 469212 Query 349909 TGTTAAAGAATTTAAGCG 349926 || ||||||| || || Sbjct 469213 CGTCCAAGAATTCAAACG 469230 >seq23 Length=538764 Score = 102 bits (112), Expect = 2e-16 Identities = 400/618 (65%), Gaps = 17/618 (3%) Strand=Plus/Minus Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 ||||| ||||| || || || || || || || ||||||| | ||||| |||||| Sbjct 523464 GCTGTCATTACGGTGCCCGCTTACTTCAACGACAACCAGCGTCAATCCACAAAGGATGCT 523405 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 || |||||| || | || || || | || || || || ||||| ||||| || ||| Sbjct 523404 GGTGCCATTGCTGGCCTCAACGTCCTCCGTATCATCAACGAGCCCACGGCTGCTGCCATT 523345 Query 349730 GCATATGGGCTTGATAA---AATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTA 349786 || ||||| |||| || | ||| | ||| ||| | || |||| ||| | Sbjct 523344 GCTTATGGTCTTGGGTCCGGAAAGTCGGACAAGGAACGGAATGTGCTGATTTACGATCTG 523285 Query 349787 GGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGA-AGTTAA 349845 || ||||||||||| ||||| || || || ||| | || | | |||| | |||||| Sbjct 523284 GGCGGTGGTACTTTCGATGTGTCCCTTCTT-CACATTCAGGGTGGTGTTTTCACAGTTAA 523226 Query 349846 AGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCG-- 349903 || ||||||||||| || || | ||||| | || ||||| | | | ||| | Sbjct 523225 GGCCACTGCTGGTGACACTCACTTGGGTGGTCAGGACTTTGACA--CCAACCTTTTGGAA 523168 Query 349904 CATTTTGTTAAAGAATTTAAGCGTCAAG-CTAAAATTGATATTGGAGATAATCCTAGAGC 349962 || || || || || |||| |||| | || | ||| || | | || || | || Sbjct 523167 CACTTCAAGAAGGAGTTCCAGCG-CAAGACGAAGAAGGATCTTTCCGGTGATGCTCGTGC 523109 Query 349963 AATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCA 350022 | ||||| || | ||||| || || ||||| |||||| || | || || | || Sbjct 523108 CCTCCGTCGGCTCCGGACTGCTTGCGAGCGTGCCAAGCGTACCCTGTCGAACGCTGCGCA 523049 Query 350023 AACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACG 350082 ||| | | || || || ||||| |||||| | || ||| | || || || Sbjct 523048 AACTACCGTCGAGATCGACTCTCTCTTCGATGGCGAGGACTTCAACGCTCAGATCACCCG 522989 Query 350083 TGCTCGGTTTGAAGAATTATGTATG---GATCTTTTTAGAGCAACAATGGATCCTGTGGA 350139 |||||| || || || | || | | | || || || || |||| ||||| | Sbjct 522988 TGCTCGTTTCGAGGA--TCTGAACGCCAAGGCCTTCCAGGGC-ACCTTGGACCCTGTCCA 522932 Query 350140 AAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGG 350199 |||| | |||||||| || || || || || |||| || | || | ||||| Sbjct 522931 GCAAGTCCTGAAAGATGCCAACATTGAAAAGAACAAGGTTGACGAGATTGTGCTTGTTGG 522872 Query 350200 TGGTTCTACACGTATTCC 350217 |||||| |||||||| || Sbjct 522871 TGGTTCCACACGTATCCC 522854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515251119000707