Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq2 141 1e-28 >seq2 Length=1065396 Score = 141 bits (156), Expect = 1e-28 Identities = 312/462 (68%), Gaps = 18/462 (4%) Strand=Plus/Minus Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTC 60032 || |||||||| ||| | |||||||| ||||| || ||||||||| |||||||||| Sbjct 669071 TTCGCACAACGCCTCGTCGCTTTTGCGGCTGTGGAGGGTATCTTCTTCAGTGGCTCGTTC 669012 Query 60033 TGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAG 60092 | | || || ||||| || ||||||||||||||||| || ||| |||||| ||||| Sbjct 669011 GCTTCCATCTTTTGGCTTAAGAAGCGTGGCCTCATGCCTGGACTGTCTTTCTCGAACGAA 668952 Query 60093 CTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTTTGCAGTGACGCTCTATTCACACCTA 60152 || ||||| || || ||||| | ||| || ||||| ||||| || ||| Sbjct 668951 CTCATTTCACGTGATGAGGGGATGCATACTGACTTTGCTTGTTTGCTCTTCTCGCAC--- 668895 Query 60153 TTG-GAAAAATGCCCTTCCAAG--GATATTCACAAGATTGTTCAGTGGGCTTGTGAAG-T 60208 ||| |||| ||| ||||| | ||||| | ||| ||| | | ||||| | | Sbjct 668894 TTGAGAAACCGCCCCAGCCAAGCTGCTATTCTCGCTATT-ATCACCGAGGCTGTGACGAT 668836 Query 60209 GGAGAGCGAGTTCATCACAGAAGCGCTTCCATGCAAACTCATAGGTATGGACGCTGGAGA 60268 ||| | || | || || || || ||||| || |||| ||| | | Sbjct 668835 CGAGCAGAAATTTTTGACTGAGGCTCTGCCATGTGCTCTGCTAGGGATGAATTCCAACTT 668776 Query 60269 AATGACGCAGTACATTCAGTTTGTCGCGGACCGCCTCATGGCCCAGTTTGG-----AGAA 60323 |||| ||| ||||| |||| || || || ||||| | | | |||| |||| Sbjct 668775 GATGAAGCAATACATCGAGTTCGTTGCTGATCGCCTGCTCGTTGCGCTTGGCAACCAGAA 668716 Query 60324 GGACCAATTTACGGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGG 60383 || | | |||| || |||||||||| ||||||| ||||| |||| ||| Sbjct 668715 ACACTACCATTCGGC-----CAATCCTTTCGACTTCATGGAGAGTATCTCATTGGCAGGC 668661 Query 60384 AAGACCAACTTCTTTGAGAAGCGGGTCGGGGATTATTCAAAG 60425 |||||||||||||| |||||| ||||||| || ||| |||| Sbjct 668660 AAGACCAACTTCTTCGAGAAGAGGGTCGGTGACTATCAAAAG 668619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548523641241360