Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03-
01] 169 sequences; 23,712,134 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq2 141 1e-28
>seq2
Length=1065396
Score = 141 bits (156), Expect = 1e-28
Identities = 312/462 (68%), Gaps = 18/462 (4%)
Strand=Plus/Minus
Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTC 60032
|| |||||||| ||| | |||||||| ||||| || ||||||||| ||||||||||
Sbjct 669071 TTCGCACAACGCCTCGTCGCTTTTGCGGCTGTGGAGGGTATCTTCTTCAGTGGCTCGTTC 669012
Query 60033 TGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAG 60092
| | || || ||||| || ||||||||||||||||| || ||| |||||| |||||
Sbjct 669011 GCTTCCATCTTTTGGCTTAAGAAGCGTGGCCTCATGCCTGGACTGTCTTTCTCGAACGAA 668952
Query 60093 CTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTTTGCAGTGACGCTCTATTCACACCTA 60152
|| ||||| || || ||||| | ||| || ||||| ||||| || |||
Sbjct 668951 CTCATTTCACGTGATGAGGGGATGCATACTGACTTTGCTTGTTTGCTCTTCTCGCAC--- 668895
Query 60153 TTG-GAAAAATGCCCTTCCAAG--GATATTCACAAGATTGTTCAGTGGGCTTGTGAAG-T 60208
||| |||| ||| ||||| | ||||| | ||| ||| | | ||||| | |
Sbjct 668894 TTGAGAAACCGCCCCAGCCAAGCTGCTATTCTCGCTATT-ATCACCGAGGCTGTGACGAT 668836
Query 60209 GGAGAGCGAGTTCATCACAGAAGCGCTTCCATGCAAACTCATAGGTATGGACGCTGGAGA 60268
||| | || | || || || || ||||| || |||| ||| | |
Sbjct 668835 CGAGCAGAAATTTTTGACTGAGGCTCTGCCATGTGCTCTGCTAGGGATGAATTCCAACTT 668776
Query 60269 AATGACGCAGTACATTCAGTTTGTCGCGGACCGCCTCATGGCCCAGTTTGG-----AGAA 60323
|||| ||| ||||| |||| || || || ||||| | | | |||| ||||
Sbjct 668775 GATGAAGCAATACATCGAGTTCGTTGCTGATCGCCTGCTCGTTGCGCTTGGCAACCAGAA 668716
Query 60324 GGACCAATTTACGGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGG 60383
|| | | |||| || |||||||||| ||||||| ||||| |||| |||
Sbjct 668715 ACACTACCATTCGGC-----CAATCCTTTCGACTTCATGGAGAGTATCTCATTGGCAGGC 668661
Query 60384 AAGACCAACTTCTTTGAGAAGCGGGTCGGGGATTATTCAAAG 60425
|||||||||||||| |||||| ||||||| || ||| ||||
Sbjct 668660 AAGACCAACTTCTTCGAGAAGAGGGTCGGTGACTATCAAAAG 668619
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548523641241360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |