Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq57 152 6e-32 seq2 129 6e-25 seq4 89.7 6e-13 >seq57 Length=16334 Score = 152 bits (168), Expect = 6e-32 Identities = 372/558 (67%), Gaps = 8/558 (1%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGT-GAGACGTAC 53251 ||||||| || || ||| ||||||||||| || || | | | | | || || || Sbjct 15778 TCATGCGGGTGGCAGTGGAGATCCACGGTGAAGA-TATCCAAGGGGCAATCGAAACATAT 15836 Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311 |||| ||| | | | | | || || || ||| | || || || ||||| ||||| ||| Sbjct 15837 AACTTGATGTCCAACAGGCATTTCACTCATGCCTCACCCACTCTTTTCAATGCTGGGACG 15896 Query 53312 AATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371 | | | ||| | | ||||||||| | | |||||||| ||| || || || Sbjct 15897 CCTAATGCGCAGCTTGCCTCCTGCTTCCTCATCGACATGAAGGAAGACAGCATTGAAGGT 15956 Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC 53431 || ||||| || | ||| |||||| ||||||||| | |||||||| ||| || Sbjct 15957 ATSTACGACACCTTGAAGACTTGTGCCATGATCTCCAAGACCGCTGGTGGTATTGGTCTC 16016 Query 53432 CACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCG 53489 || || | || |||| || | || || ||| || || || || | || Sbjct 16017 AACA--TCCACCGCATCCGCGCCACAGGTTCATACATCTCAGGAACTAATGGTTCCTCCA 16074 Query 53490 ATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTG 53549 | || ||||| || ||||| ||||| |||||||| || ||| | |||||| |||| |||| Sbjct 16075 ACGGTATCGTTCCGATGCTTCGCGTGTTCAACAATACCGCCAGATACGTCGACCAAGGTG 16134 Query 53550 GTGGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATG 53608 | ||||| | ||| | | || || ||||| || ||||| ||||| || || | | Sbjct 16135 GCAACAAGCGTCCAGGTG-CTTTTGCTATCTATCTTGAGCCTTGGCATGCTGATGTGTTC 16193 Query 53609 GAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTT 53668 ||||||||||| || || ||| || || | ||||| | ||| ||||||||| || Sbjct 16194 GAGTTTCTCGACCTACGAAAGAACCACGGCAAAGAAGAAGTTCGCGCCCGTGACCTATTC 16253 Query 53669 ACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTAC 53728 || || |||| ||||| | |||||| | ||| |||||| | |||| ||| Sbjct 16254 CTCGCYCTATGGACCCCGGATTTGTTCATGAAGCGGGTCGAGAAGAATCAGGATTGGACA 16313 Query 53729 CTGATGTGCCCGAACGAG 53746 || | ||||| || ||| Sbjct 16314 CTCTTCTGCCCCAATGAG 16331 >seq2 Length=1065396 Score = 129 bits (142), Expect = 6e-25 Identities = 305/456 (67%), Gaps = 6/456 (1%) Strand=Plus/Plus Query 74456 CTTTGAATAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTT 74515 |||| ||| |||||||||| ||| || || ||||||||||| ||| |||| ||||| | Sbjct 668619 CTTTTGATAGTCACCGACCCTCTTCTCGAAGAAGTTGGTCTTGCCTGCCAATGAGATACT 668678 Query 74516 CTCCATCCAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTTCTCCCCAAACTGTGCCAT 74575 |||||| |||||||||| || | | ||| || | |||| | | | Sbjct 668679 CTCCATGAAGTCGAAAGGATTGGCCGAATGGTAGTGTTTCTGGTTGCCAAGCGCAACGAG 668738 Query 74576 GAGGCGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAG 74635 |||||||| || || || | ||||| ||| |||| | || ||| || | || Sbjct 668739 CAGGCGATCAGCAACGAACTCGATGTATTGCTTCATCAAGTTGGAATTCATCCCTAGCAG 668798 Query 74636 TTTGCACGGCAGTGCCTCGGTGATAAACTCACTCTCCACC-TCGCAAGCCCATTGGACAA 74694 || ||||| ||||| || | ||| | ||| | | || || | | || | || Sbjct 668799 AGCACATGGCAGAGCCTCAGTCAAAAATTTCTGCTCGATCGTCACAGCCTCGGTG-ATAA 668857 Query 74695 TCTTGTGAATGTCT--TTGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAAGCGTCACGGC 74752 | | |||| | |||| ||| |||| ||| ||| ||| | ||| || Sbjct 668858 TAGCGAGAATAGCAGCTTGGCTGGGGCGGTTTC--TCAAGTGCGAGAAGAGCAAACAAGC 668915 Query 74753 AAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGG 74812 ||| || |||| || ||||| | || | ||| ||||| || || || ||||| Sbjct 668916 AAAGTCAGTATGCATCCCCTCATCACGTGAAATGAGTTCGTTCGAGAAAGACAGTCCAGG 668975 Query 74813 CATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCC 74872 ||| || ||||||||||| | ||||||||||| | ||| || |||||||||||||| || Sbjct 668976 CATGAGGCCACGCTTCTTAAGCCAAAAGATGGAAGCGAACGAGCCACTGAAGAAGATACC 669035 Query 74873 TTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAA 74908 || ||| |||||| ||||| |||||||| ||||| Sbjct 669036 CTCCACAGCCGCAAAAGCGACGAGGCGTTGTGCGAA 669071 >seq4 Length=857342 Score = 89.7 bits (98), Expect = 6e-13 Identities = 229/338 (68%), Gaps = 8/338 (2%) Strand=Plus/Minus Query 152778 CAAGCCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGTCATGATCATCAGACGACCGTA 152837 ||| || |||||||| |||||| |||| ||| ||||||||||| || |||| || Sbjct 450649 CAACCCTTTGATGTGACTTCCGTCGTGATCTTGGTCAGTCATGATCATTAGGTGACCATA 450590 Query 152838 GCGCAGGTCACGTAGTGACCCGTAGAC-CTTTC-CATGTTGAAGCCCGAGGATCTTTTTG 152895 ||||| | | | || | | || || ||||| ||| || | ||| | || || |||| Sbjct 450589 ACGCAGACCTC-TCGT-ATCTGTGTACTCTTTCTTATGCTGCAACCCCATGAACTGTTTG 450532 Query 152896 AGGTTGGAAAATTCCTCATTATCGGTCACCTGTTTCACCGTGGCATCCCGAACATTGCGC 152955 | ||| | ||| |||| | || | ||| | | || ||||||| |||||| || Sbjct 450531 ATGTTCTGGATTTCGGCATTTTTGGAGAGCTGGTCAATCGACGCATCCCTGACATTGAGC 450472 Query 152956 GGCTTTCCCCGGAGTGGAAACACGCCGAACGCGTTGCGGCCTACAAC-GCTCAGACCGGC 153014 | ||||| ||||| || ||||| || || || | ||||| || |||| || || Sbjct 450471 AGTTTTCCGCGGAGAGGGAACACTCCAAAGTAGTCTGGTCCTACTACTGCTC-TTCCAGC 450413 Query 153015 AATAGCAAGGGCTTTCGCCGAGTCACCCTCGGTGATAATAAGCGTACAGTCGTG-AGACC 153073 | ||| || | || || || ||||||||||| | || || || || ||||| | | Sbjct 450412 TACAGCCAGACCCTTGGCTGAATCACCCTCGGTAAGGATCAGAGTGCACTCGTGCCCATC 450353 Query 153074 GATGAGTACCGGCCCAGTTGGCGTCGTCAAGCTTGGGG 153111 || ||||| || ||| |||||| | ||||| ||| Sbjct 450352 TCTG-GTACCAGCTTTGTTCGCGTCGACGAGCTTTGGG 450316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547214844006200