Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03-
01] 169 sequences; 23,712,134 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq57 152 6e-32
seq2 129 6e-25
seq4 89.7 6e-13
>seq57
Length=16334
Score = 152 bits (168), Expect = 6e-32
Identities = 372/558 (67%), Gaps = 8/558 (1%)
Strand=Plus/Plus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGT-GAGACGTAC 53251
||||||| || || ||| ||||||||||| || || | | | | | || || ||
Sbjct 15778 TCATGCGGGTGGCAGTGGAGATCCACGGTGAAGA-TATCCAAGGGGCAATCGAAACATAT 15836
Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311
|||| ||| | | | | | || || || ||| | || || || ||||| ||||| |||
Sbjct 15837 AACTTGATGTCCAACAGGCATTTCACTCATGCCTCACCCACTCTTTTCAATGCTGGGACG 15896
Query 53312 AATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371
| | | ||| | | ||||||||| | | |||||||| ||| || || ||
Sbjct 15897 CCTAATGCGCAGCTTGCCTCCTGCTTCCTCATCGACATGAAGGAAGACAGCATTGAAGGT 15956
Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC 53431
|| ||||| || | ||| |||||| ||||||||| | |||||||| ||| ||
Sbjct 15957 ATSTACGACACCTTGAAGACTTGTGCCATGATCTCCAAGACCGCTGGTGGTATTGGTCTC 16016
Query 53432 CACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCG 53489
|| || | || |||| || | || || ||| || || || || | ||
Sbjct 16017 AACA--TCCACCGCATCCGCGCCACAGGTTCATACATCTCAGGAACTAATGGTTCCTCCA 16074
Query 53490 ATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTG 53549
| || ||||| || ||||| ||||| |||||||| || ||| | |||||| |||| ||||
Sbjct 16075 ACGGTATCGTTCCGATGCTTCGCGTGTTCAACAATACCGCCAGATACGTCGACCAAGGTG 16134
Query 53550 GTGGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATG 53608
| ||||| | ||| | | || || ||||| || ||||| ||||| || || | |
Sbjct 16135 GCAACAAGCGTCCAGGTG-CTTTTGCTATCTATCTTGAGCCTTGGCATGCTGATGTGTTC 16193
Query 53609 GAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTT 53668
||||||||||| || || ||| || || | ||||| | ||| ||||||||| ||
Sbjct 16194 GAGTTTCTCGACCTACGAAAGAACCACGGCAAAGAAGAAGTTCGCGCCCGTGACCTATTC 16253
Query 53669 ACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTAC 53728
|| || |||| ||||| | |||||| | ||| |||||| | |||| |||
Sbjct 16254 CTCGCYCTATGGACCCCGGATTTGTTCATGAAGCGGGTCGAGAAGAATCAGGATTGGACA 16313
Query 53729 CTGATGTGCCCGAACGAG 53746
|| | ||||| || |||
Sbjct 16314 CTCTTCTGCCCCAATGAG 16331
>seq2
Length=1065396
Score = 129 bits (142), Expect = 6e-25
Identities = 305/456 (67%), Gaps = 6/456 (1%)
Strand=Plus/Plus
Query 74456 CTTTGAATAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTT 74515
|||| ||| |||||||||| ||| || || ||||||||||| ||| |||| ||||| |
Sbjct 668619 CTTTTGATAGTCACCGACCCTCTTCTCGAAGAAGTTGGTCTTGCCTGCCAATGAGATACT 668678
Query 74516 CTCCATCCAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTTCTCCCCAAACTGTGCCAT 74575
|||||| |||||||||| || | | ||| || | |||| | | |
Sbjct 668679 CTCCATGAAGTCGAAAGGATTGGCCGAATGGTAGTGTTTCTGGTTGCCAAGCGCAACGAG 668738
Query 74576 GAGGCGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAG 74635
|||||||| || || || | ||||| ||| |||| | || ||| || | ||
Sbjct 668739 CAGGCGATCAGCAACGAACTCGATGTATTGCTTCATCAAGTTGGAATTCATCCCTAGCAG 668798
Query 74636 TTTGCACGGCAGTGCCTCGGTGATAAACTCACTCTCCACC-TCGCAAGCCCATTGGACAA 74694
|| ||||| ||||| || | ||| | ||| | | || || | | || | ||
Sbjct 668799 AGCACATGGCAGAGCCTCAGTCAAAAATTTCTGCTCGATCGTCACAGCCTCGGTG-ATAA 668857
Query 74695 TCTTGTGAATGTCT--TTGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAAGCGTCACGGC 74752
| | |||| | |||| ||| |||| ||| ||| ||| | ||| ||
Sbjct 668858 TAGCGAGAATAGCAGCTTGGCTGGGGCGGTTTC--TCAAGTGCGAGAAGAGCAAACAAGC 668915
Query 74753 AAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGG 74812
||| || |||| || ||||| | || | ||| ||||| || || || |||||
Sbjct 668916 AAAGTCAGTATGCATCCCCTCATCACGTGAAATGAGTTCGTTCGAGAAAGACAGTCCAGG 668975
Query 74813 CATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCC 74872
||| || ||||||||||| | ||||||||||| | ||| || |||||||||||||| ||
Sbjct 668976 CATGAGGCCACGCTTCTTAAGCCAAAAGATGGAAGCGAACGAGCCACTGAAGAAGATACC 669035
Query 74873 TTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAA 74908
|| ||| |||||| ||||| |||||||| |||||
Sbjct 669036 CTCCACAGCCGCAAAAGCGACGAGGCGTTGTGCGAA 669071
>seq4
Length=857342
Score = 89.7 bits (98), Expect = 6e-13
Identities = 229/338 (68%), Gaps = 8/338 (2%)
Strand=Plus/Minus
Query 152778 CAAGCCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGTCATGATCATCAGACGACCGTA 152837
||| || |||||||| |||||| |||| ||| ||||||||||| || |||| ||
Sbjct 450649 CAACCCTTTGATGTGACTTCCGTCGTGATCTTGGTCAGTCATGATCATTAGGTGACCATA 450590
Query 152838 GCGCAGGTCACGTAGTGACCCGTAGAC-CTTTC-CATGTTGAAGCCCGAGGATCTTTTTG 152895
||||| | | | || | | || || ||||| ||| || | ||| | || || ||||
Sbjct 450589 ACGCAGACCTC-TCGT-ATCTGTGTACTCTTTCTTATGCTGCAACCCCATGAACTGTTTG 450532
Query 152896 AGGTTGGAAAATTCCTCATTATCGGTCACCTGTTTCACCGTGGCATCCCGAACATTGCGC 152955
| ||| | ||| |||| | || | ||| | | || ||||||| |||||| ||
Sbjct 450531 ATGTTCTGGATTTCGGCATTTTTGGAGAGCTGGTCAATCGACGCATCCCTGACATTGAGC 450472
Query 152956 GGCTTTCCCCGGAGTGGAAACACGCCGAACGCGTTGCGGCCTACAAC-GCTCAGACCGGC 153014
| ||||| ||||| || ||||| || || || | ||||| || |||| || ||
Sbjct 450471 AGTTTTCCGCGGAGAGGGAACACTCCAAAGTAGTCTGGTCCTACTACTGCTC-TTCCAGC 450413
Query 153015 AATAGCAAGGGCTTTCGCCGAGTCACCCTCGGTGATAATAAGCGTACAGTCGTG-AGACC 153073
| ||| || | || || || ||||||||||| | || || || || ||||| | |
Sbjct 450412 TACAGCCAGACCCTTGGCTGAATCACCCTCGGTAAGGATCAGAGTGCACTCGTGCCCATC 450353
Query 153074 GATGAGTACCGGCCCAGTTGGCGTCGTCAAGCTTGGGG 153111
|| ||||| || ||| |||||| | ||||| |||
Sbjct 450352 TCTG-GTACCAGCTTTGTTCGCGTCGACGAGCTTTGGG 450316
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547214844006200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |