Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03-
01] 169 sequences; 23,712,134 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq15 152 6e-32
seq5 134 2e-26
seq82 122 1e-22
seq9 93.3 5e-14
>seq15
Length=722239
Score = 152 bits (168), Expect = 6e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| || || || ||||| || ||| | ||||| |||||
Sbjct 457265 ATGCAGATCTTCGTTAAGACCCTGACGGGTAAGACGATCACTTTGGAGGTGGAGTCTTCA 457206
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| ||||| | || |||||||||||||| || || || || ||||||
Sbjct 457205 GACACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAAGGCATCCCGCCTGACCAG 457146
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || ||||| ||||| || || |||| || ||||| | ||||| ||
Sbjct 457145 CAGCGTCTTATCTTCGCTGGCAAGCAGCTAGAAGATGGCCGCACCCTGTCCGACTACAAC 457086
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| || ||||| || ||||| || || | ||||| || |||||
Sbjct 457085 ATCCAGAAAGAATCAACCCTTCACCTCGTGCTCCGTCTCCGTGGTGG 457039
Score = 147 bits (162), Expect = 2e-30
Identities = 171/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| || || || || || ||||| || ||||| || || |
Sbjct 456809 ATGCAGATCTTCGTCAAGACTCTGACTGGGAAAACGATTACCCTCGAGGTCGAATCTTCT 456750
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| || | || | || ||||| || |||||||| || ||||||||||||
Sbjct 456749 GATACGATTGACAACGTCAAATCAAAGATTCAAGATAAGGAGGGTATCCCTCCAGACCAG 456690
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| | || || ||||||||||| || ||||||| ||||| || ||||||| ||
Sbjct 456689 CAGCGATTGATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGTACTCTTTCAGACTACAAC 456630
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAA 27636
|||| ||||| || || || | || ||||||| || ||||| |||
Sbjct 456629 ATCCAGAAGGAGAGTACCCTGCACTTGGTGCTGCGTCTCCGTGGTGGGCAA 456579
Score = 138 bits (152), Expect = 1e-27
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| |||||||| || ||||||||||| || || || || ||||| ||
Sbjct 457037 ATGCAAATCTTCGTCAAGACTCTGACCGGCAAGACGATCACACTAGAAGTTGAATCCTCC 456978
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | ||| | || | || || || ||||||||||| || || |||||||||
Sbjct 456977 GATACCATCGACAATGTCAAATCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCAG 456918
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584
||||| | || || |||||||| || || ||||||| ||||| | ||| ||||| ||
Sbjct 456917 CAGCGGTTGATCTTCGCTGGTAAACAGCTGGAGGATGGCCGTACATTGAGC-GACTACAA 456859
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || ||||| |||| | || | ||| | ||||| || |||||
Sbjct 456858 CATTCAGAAGGAGAGCACTTTGCACTTGGTCCTTCGTCTGCGTGGTGG 456811
Score = 136 bits (150), Expect = 5e-27
Identities = 152/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
||||||||||| || || ||||||||||||||| ||| | ||| | || | |||
Sbjct 457760 ACCGGCAAGACCATCACCCTTGAGGTTGAGTCATCTGACACCATCGACAACGTCAAGAGC 457701
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| |||||||| ||||| ||||||||||| ||||||||||| | || || ||||| |||
Sbjct 457700 AAGATTCAGGATAAGGAAGGAATTCCTCCTGACCAGCAGCGCTTGATCTTCGCTGGCAAG 457641
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
|| || || || | || || || | || || || |||| || |||||||| |||||
Sbjct 457640 CAGCTTGAAGACGGCCGGACGCTCTCCGATTACAACATCCAGAAAGAATCCACCCTTCAC 457581
Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||| | ||||| || || ||
Sbjct 457580 CTTGTCCTTCGTCTGCGTGGAGG 457558
>seq5
Length=849029
Score = 134 bits (148), Expect = 2e-26
Identities = 139/182 (76%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473
||| |||||||| || || |||||||| || || |||||||| ||||| | || | ||
Sbjct 477873 CTTCGTCAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCAGCGACACAAT 477814
Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533
| ||| | ||| | || || ||||| |||||||||||||| || || ||||||||| |
Sbjct 477813 CGACAATGTCAAGTCGAAGATCCAGGATAAGGAGGGAATTCCCCCGGATCAGCAGCGTTT 477754
Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593
||| || ||||| ||||| |||||||||| || || || | ||||| || |||| ||
Sbjct 477753 AATCTTCGCTGGCAAGCAGCTCGAGGATGGACGGACACTTTCCGACTACAACATCCAGAA 477694
Query 27594 GG 27595
||
Sbjct 477693 GG 477692
>seq82
Length=10320
Score = 122 bits (134), Expect = 1e-22
Identities = 354/533 (66%), Gaps = 28/533 (5%)
Strand=Plus/Minus
Query 80541 CCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGG 80600
||||||||| | ||||| ||||| | || | ||||| ||| | ||| |||||||||
Sbjct 723 CCACATGTCATACTGCAGAATGCCTTGAGATACAGGAGATCCCTCATACGACTCGTACGG 664
Query 80601 GCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAA 80660
||| ||||||| |||||||| || | | |||| |||||| || || ||| ||
Sbjct 663 GCCGAGTTTCTTGGCAAGCTCACAGGAAGCTGTCAGGGACGCGTGGTAGATAGTCTCGAA 604
Query 80661 GACGCCCTTGTTCACACCGCG-CGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGA 80719
|| | |||| || || |||||| || ||||| | | | || || ||
Sbjct 603 GATCTGAATATTCA-ACTGCTTCGCCTGCGGAGAATCGAAAGGAAGACGCAGAGCCAGGA 545
Query 80720 ACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCG-C 80778
| |||||||||| ||||| || || | || || || | ||| || ||| | || |
Sbjct 544 ATGCGTCAGCCAGACCCTGGACACCTACTGCAATAGGCCTGTGTCGGAAGTT-GCTCTTC 486
Query 80779 TCGGCCTCCGGAATTGGGTAAAAGTTATT---ATCGATGACGCGGTTCAGGTTGCGTGTA 80835
| ||||| || | |||||| || ||| |||||| | ||||| ||| | ||
Sbjct 485 TTAGCCTCTGGGACTGGGTA---GTGATTGACATCGATAATCTTGTTCAAGTT-CTTGAC 430
Query 80836 -ACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCCCTTCACA----- 80889
|||||| | || || || || ||||| ||||| | | || || |||
Sbjct 429 CACAACCTGGGTGACCTCGTGTAGTTTGCCGAAGTCATAGACG---CCGTTGACAGCATC 373
Query 80890 AATGCCGGAAGGCTCAGGGAC----GCCAGATTGCACACGGCCACCTCTTCAGCATCTGT 80945
|| | || |||| || || || || |||||||| || ||||| || | | ||
Sbjct 372 AACGAAGGTAGGCAGAGCGATCGAAGCAAGGTTGCACACAGCAACCTCATCTGGGGCAGT 313
Query 80946 AAACTCGACGATTTCCGTGCACAAATTAGAAGACTTA--ATTGTACCCAGGTTTTTCTGG 81003
| ||||||||||||||||| | ||| || ||| || ||||| || |||||||||
Sbjct 312 GTATTCGACGATTTCCGTGCAGAGATTGGAG--CTTCGGATAGTACCAAGATTTTTCTGG 255
Query 81004 TTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTC 81056
|| |||| ||||||||| |||||||| |||| | ||| | ||||||||
Sbjct 254 TTGCTCTTGCGGTTGCAAGCATCCTTGTAAAGCATGAAGGGGTTTCCGGTCTC 202
>seq9
Length=790667
Score = 93.3 bits (102), Expect = 5e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558
|||||||| || || ||||| || ||||||||||| || || || || ||||| || |||
Sbjct 434725 GACAAGGAAGGGATCCCTCCGGATCAGCAGCGTCTGATCTTCGCCGGAAAGCAGCTTGAG 434666
Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|||| ||||| || | ||||| || |||| ||||| || || ||||| || || |
Sbjct 434665 GATGGCCGTACTCTGTCTGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTGCTC 434606
Query 27619 CGTCTTCGCGGTGG 27632
||||| || || ||
Sbjct 434605 CGTCTGCGTGGCGG 434592
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570309195219280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |