Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq15 152 6e-32 seq5 134 2e-26 seq82 122 1e-22 seq9 93.3 5e-14 >seq15 Length=722239 Score = 152 bits (168), Expect = 6e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || || || ||||| || ||| | ||||| ||||| Sbjct 457265 ATGCAGATCTTCGTTAAGACCCTGACGGGTAAGACGATCACTTTGGAGGTGGAGTCTTCA 457206 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| ||||| | || |||||||||||||| || || || || |||||| Sbjct 457205 GACACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAAGGCATCCCGCCTGACCAG 457146 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || ||||| ||||| || || |||| || ||||| | ||||| || Sbjct 457145 CAGCGTCTTATCTTCGCTGGCAAGCAGCTAGAAGATGGCCGCACCCTGTCCGACTACAAC 457086 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || ||||| || ||||| || || | ||||| || ||||| Sbjct 457085 ATCCAGAAAGAATCAACCCTTCACCTCGTGCTCCGTCTCCGTGGTGG 457039 Score = 147 bits (162), Expect = 2e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || || || || ||||| || ||||| || || | Sbjct 456809 ATGCAGATCTTCGTCAAGACTCTGACTGGGAAAACGATTACCCTCGAGGTCGAATCTTCT 456750 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| || | || | || ||||| || |||||||| || |||||||||||| Sbjct 456749 GATACGATTGACAACGTCAAATCAAAGATTCAAGATAAGGAGGGTATCCCTCCAGACCAG 456690 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | || || ||||||||||| || ||||||| ||||| || ||||||| || Sbjct 456689 CAGCGATTGATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGTACTCTTTCAGACTACAAC 456630 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAA 27636 |||| ||||| || || || | || ||||||| || ||||| ||| Sbjct 456629 ATCCAGAAGGAGAGTACCCTGCACTTGGTGCTGCGTCTCCGTGGTGGGCAA 456579 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || ||||||||||| || || || || ||||| || Sbjct 457037 ATGCAAATCTTCGTCAAGACTCTGACCGGCAAGACGATCACACTAGAAGTTGAATCCTCC 456978 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | ||| | || | || || || ||||||||||| || || ||||||||| Sbjct 456977 GATACCATCGACAATGTCAAATCCAAGATCCAAGACAAGGAGGGTATCCCACCAGACCAG 456918 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| | || || |||||||| || || ||||||| ||||| | ||| ||||| || Sbjct 456917 CAGCGGTTGATCTTCGCTGGTAAACAGCTGGAGGATGGCCGTACATTGAGC-GACTACAA 456859 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| |||| | || | ||| | ||||| || ||||| Sbjct 456858 CATTCAGAAGGAGAGCACTTTGCACTTGGTCCTTCGTCTGCGTGGTGG 456811 Score = 136 bits (150), Expect = 5e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||||||||| || || ||||||||||||||| ||| | ||| | || | ||| Sbjct 457760 ACCGGCAAGACCATCACCCTTGAGGTTGAGTCATCTGACACCATCGACAACGTCAAGAGC 457701 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || |||||||| ||||| ||||||||||| ||||||||||| | || || ||||| ||| Sbjct 457700 AAGATTCAGGATAAGGAAGGAATTCCTCCTGACCAGCAGCGCTTGATCTTCGCTGGCAAG 457641 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || || || || | || || || | || || || |||| || |||||||| ||||| Sbjct 457640 CAGCTTGAAGACGGCCGGACGCTCTCCGATTACAACATCCAGAAAGAATCCACCCTTCAC 457581 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || ||| | ||||| || || || Sbjct 457580 CTTGTCCTTCGTCTGCGTGGAGG 457558 >seq5 Length=849029 Score = 134 bits (148), Expect = 2e-26 Identities = 139/182 (76%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| |||||||| || || |||||||| || || |||||||| ||||| | || | || Sbjct 477873 CTTCGTCAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCAGCGACACAAT 477814 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | ||| | ||| | || || ||||| |||||||||||||| || || ||||||||| | Sbjct 477813 CGACAATGTCAAGTCGAAGATCCAGGATAAGGAGGGAATTCCCCCGGATCAGCAGCGTTT 477754 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 ||| || ||||| ||||| |||||||||| || || || | ||||| || |||| || Sbjct 477753 AATCTTCGCTGGCAAGCAGCTCGAGGATGGACGGACACTTTCCGACTACAACATCCAGAA 477694 Query 27594 GG 27595 || Sbjct 477693 GG 477692 >seq82 Length=10320 Score = 122 bits (134), Expect = 1e-22 Identities = 354/533 (66%), Gaps = 28/533 (5%) Strand=Plus/Minus Query 80541 CCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGG 80600 ||||||||| | ||||| ||||| | || | ||||| ||| | ||| ||||||||| Sbjct 723 CCACATGTCATACTGCAGAATGCCTTGAGATACAGGAGATCCCTCATACGACTCGTACGG 664 Query 80601 GCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAA 80660 ||| ||||||| |||||||| || | | |||| |||||| || || ||| || Sbjct 663 GCCGAGTTTCTTGGCAAGCTCACAGGAAGCTGTCAGGGACGCGTGGTAGATAGTCTCGAA 604 Query 80661 GACGCCCTTGTTCACACCGCG-CGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGA 80719 || | |||| || || |||||| || ||||| | | | || || || Sbjct 603 GATCTGAATATTCA-ACTGCTTCGCCTGCGGAGAATCGAAAGGAAGACGCAGAGCCAGGA 545 Query 80720 ACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCG-C 80778 | |||||||||| ||||| || || | || || || | ||| || ||| | || | Sbjct 544 ATGCGTCAGCCAGACCCTGGACACCTACTGCAATAGGCCTGTGTCGGAAGTT-GCTCTTC 486 Query 80779 TCGGCCTCCGGAATTGGGTAAAAGTTATT---ATCGATGACGCGGTTCAGGTTGCGTGTA 80835 | ||||| || | |||||| || ||| |||||| | ||||| ||| | || Sbjct 485 TTAGCCTCTGGGACTGGGTA---GTGATTGACATCGATAATCTTGTTCAAGTT-CTTGAC 430 Query 80836 -ACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCCCTTCACA----- 80889 |||||| | || || || || ||||| ||||| | | || || ||| Sbjct 429 CACAACCTGGGTGACCTCGTGTAGTTTGCCGAAGTCATAGACG---CCGTTGACAGCATC 373 Query 80890 AATGCCGGAAGGCTCAGGGAC----GCCAGATTGCACACGGCCACCTCTTCAGCATCTGT 80945 || | || |||| || || || || |||||||| || ||||| || | | || Sbjct 372 AACGAAGGTAGGCAGAGCGATCGAAGCAAGGTTGCACACAGCAACCTCATCTGGGGCAGT 313 Query 80946 AAACTCGACGATTTCCGTGCACAAATTAGAAGACTTA--ATTGTACCCAGGTTTTTCTGG 81003 | ||||||||||||||||| | ||| || ||| || ||||| || ||||||||| Sbjct 312 GTATTCGACGATTTCCGTGCAGAGATTGGAG--CTTCGGATAGTACCAAGATTTTTCTGG 255 Query 81004 TTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTC 81056 || |||| ||||||||| |||||||| |||| | ||| | |||||||| Sbjct 254 TTGCTCTTGCGGTTGCAAGCATCCTTGTAAAGCATGAAGGGGTTTCCGGTCTC 202 >seq9 Length=790667 Score = 93.3 bits (102), Expect = 5e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 |||||||| || || ||||| || ||||||||||| || || || || ||||| || ||| Sbjct 434725 GACAAGGAAGGGATCCCTCCGGATCAGCAGCGTCTGATCTTCGCCGGAAAGCAGCTTGAG 434666 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 |||| ||||| || | ||||| || |||| ||||| || || ||||| || || | Sbjct 434665 GATGGCCGTACTCTGTCTGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTGCTC 434606 Query 27619 CGTCTTCGCGGTGG 27632 ||||| || || || Sbjct 434605 CGTCTGCGTGGCGG 434592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570309195219280