Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03-
01] 169 sequences; 23,712,134 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq3 86.0 6e-12
>seq3
Length=917765
Score = 86.0 bits (94), Expect = 6e-12
Identities = 141/201 (70%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 34309 GCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAA 34368
||| ||| ||| ||| | ||||||||||||| | || || || || || |||||
Sbjct 193895 GCTGTCGGCCCAGGGCATCAAGATCTGGGACGGAAATGGAAGCCGGGAGTTCCTTGACAA 193954
Query 34369 GCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAG 34428
|| | || || |||| |||||||||||||| |||||||| || |||||| |
Sbjct 193955 TGTTGGTCTGTCACACCGAGAGGTCGGCGACTTGGGCCCTGTCTACGGCTTTCAGTGGCG 194014
Query 34429 ACACTTTGGGGCGGAGTATCGGGGGAGCG-AAGCGGACTATTCGGGACAGGGAGCGGACC 34487
|| ||||| || ||||| | | ||| | || |||||| | || || |||| ||| |
Sbjct 194015 CCATTTTGGCGCCGAGTA-CATAGATGCGCATGCAGACTATACAGGTCAAGGAGTGGATC 194073
Query 34488 AGCTGCAGTACGTGATCGACA 34508
|| || | | ||||||||||
Sbjct 194074 AGTTGGCGGAAGTGATCGACA 194094
Score = 86.0 bits (94), Expect = 6e-12
Identities = 141/201 (70%), Gaps = 2/201 (1%)
Strand=Plus/Minus
Query 6837 TGTCGATCACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTT-CGCTCCCC 6895
|||||||||| | | || ||| ||| |||| || || | |||||| || | ||| |
Sbjct 194094 TGTCGATCACTTCCGCCAACTGATCCACTCCTTGACCTGTATAGTCTGCATGCGCATCTA 194035
Query 6896 CGATACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCC 6955
| ||||| || ||||| || | |||||| || |||||||| |||||||||||||| ||
Sbjct 194034 TG-TACTCGGCGCCAAAATGGCGCCACTGAAAGCCGTAGACAGGGCCCAAGTCGCCGACC 193976
Query 6956 TCCCGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATC 7015
|| || || | || ||||| || || || || || | |||||||||||
Sbjct 193975 TCTCGGTGTGACAGACCAACATTGTCAAGGAACTCCCGGCTTCCATTTCCGTCCCAGATC 193916
Query 7016 TTCACCCCCCGGGACGAGAGC 7036
|| | ||| ||| ||| |||
Sbjct 193915 TTGATGCCCTGGGCCGACAGC 193895
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448261453045680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |