Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq15 187 6e-42 seq5 125 2e-23 seq82 100 7e-16 seq9 89.7 1e-12 >seq15 Length=722239 Score = 187 bits (206), Expect = 6e-42 Identities = 163/203 (80%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || ||| || | |||||||||||||| ||||| ||||| |||||||| ||||| | || Sbjct 457560 TCCACGCAGACGAAGGACAAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCGGAGAG 457619 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 |||| || ||||| ||||||||||| |||||||| | ||| || ||||||||||||| Sbjct 457620 CGTCCGGCCGTCTTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGAGGAAT 457679 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 ||||||||| ||||| ||||| || ||||| |||||||||||||| |||||||| Sbjct 457680 TCCTTCCTTATCCTGAATCTTGCTCTTGACGTTGTCGATGGTGTCAGATGACTCAACCTC 457739 Query 211070 GAGAGTGATCGTCTTTCCCGTGA 211092 || ||||| ||||| || |||| Sbjct 457740 AAGGGTGATGGTCTTGCCGGTGA 457762 Score = 179 bits (198), Expect = 9e-40 Identities = 167/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || |||||||| || || ||||| |||||||| || || | ||||| | |||||| Sbjct 457054 AGCACGAGGTGAAGGGTTGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCT 457113 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| ||||||||||| || || |||||||| || | |||||||||||| Sbjct 457114 TCTAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCC 457173 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| ||||| || ||||||||||| || || ||||| | |||||||||| Sbjct 457174 TGAATCTTCGACTTCACATTGTCGATGGTGTCTGAAGACTCCACCTCCAAAGTGATCGTC 457233 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || ||||| || || | |||||| Sbjct 457234 TTACCCGTCAGGGTCTTAACGAAGATCTGCAT 457265 Score = 145 bits (160), Expect = 2e-29 Identities = 152/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || || || || || || ||||| |||||||| || || | ||||| | |||||| Sbjct 457282 AGCACCAGATGGAGGGTTGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCT 457341 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || || ||||| |||||||| | ||||| ||||| ||||| | |||||||||||| Sbjct 457342 TCGAGTTGTTTGCCGGCGAAGATCAAACGTTGCTGGTCGGGAGGGATTCCTTCCTTGTCT 457401 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || |||||| ||||| || ||||| ||||| || || ||||| | ||||| ||| Sbjct 457402 TGAATCTTTGACTTCACATTGTCGATCGTGTCTGACGACTCGACCTCCAAGGTGATGGTC 457461 Query 211083 TTTCCCGTGAGAGTCTTTAC 211102 || || ||||||||||| || Sbjct 457462 TTGCCAGTGAGAGTCTTGAC 457481 Score = 134 bits (148), Expect = 3e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 210923 CTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAA 210982 ||| || |||||||| || || | ||| || | ||||| ||||||||||| || ||||| Sbjct 456618 CTCCTTCTGGATGTTGTAGTCTGAAAGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAA 456677 Query 210983 GATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTT 211042 ||| | || || ||||| ||||| | || ||||| || || |||||| ||| ||||| Sbjct 456678 GATCAATCGCTGCTGGTCTGGAGGGATACCCTCCTTATCTTGAATCTTTGATTTGACGTT 456737 Query 211043 TTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTAC 211102 || || || ||||| ||| |||||||| || ||||| || || || |||||||| || Sbjct 456738 GTCAATCGTATCAGAAGATTCGACCTCGAGGGTAATCGTTTTCCCAGTCAGAGTCTTGAC 456797 Query 211103 AAACACCTGCAT 211114 || | |||||| Sbjct 456798 GAAGATCTGCAT 456809 Score = 129 bits (142), Expect = 1e-24 Identities = 158/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATC 210961 ||||| | ||| | |||| ||| || || ||||| || || | ||| | | | ||||| Sbjct 456826 AGGACCAAGTGCAAAGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAATG-TACGGCCATC 456884 Query 210962 TTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 |||||||| || || |||||||| | || || ||||| || || | || |||||||| Sbjct 456885 CTCCAGCTGTTTACCAGCGAAGATCAACCGCTGCTGGTCTGGTGGGATACCCTCCTTGTC 456944 Query 211022 CTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGT 211081 |||||||| ||| || || |||||||| || ||| |||||| || || |||||||| Sbjct 456945 TTGGATCTTGGATTTGACATTGTCGATGGTATCGGAGGATTCAACTTCTAGTGTGATCGT 457004 Query 211082 CTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| || || |||||||| || || | ||||| Sbjct 457005 CTTGCCGGTCAGAGTCTTGACGAAGATTTGCAT 457037 >seq5 Length=849029 Score = 125 bits (138), Expect = 2e-23 Identities = 135/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || | ||| |||| |||||| || ||||||||||| |||||||| Sbjct 477694 TTCTGGATGTTGTAGTCGGAAAGTGTCCGTCCATCCTCGAGCTGCTTGCCAGCGAAGATT 477753 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 | || || || || || |||| ||| ||||| ||||||||||| || || || ||| Sbjct 477754 AAACGCTGCTGATCCGGGGGAATTCCCTCCTTATCCTGGATCTTCGACTTGACATTGTCG 477813 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 || ||||| | || ||||| || ||||| ||||| ||||| || ||||| || || Sbjct 477814 ATTGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGAA 477872 >seq82 Length=10320 Score = 100 bits (110), Expect = 7e-16 Identities = 188/272 (69%), Gaps = 12/272 (4%) Strand=Plus/Minus Query 178088 CCAAAGTTCTTTTGGTTGCTCTTTC---TGCAAATGGCATCTTTGTACGCAATGAAGGGC 178144 |||| || || ||||||||||| | ||||| ||||| ||||| |||||||| Sbjct 269 CCAAGATTTTTCTGGTTGCTCTTGCGGTTGCAA---GCATCCTTGTAAAGCATGAAGGGG 213 Query 178145 ATTCCCACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTC 178204 |||| ||| | |||||| | ||||| | ||| |||| ||||||| || || Sbjct 212 TTTCCGGTCTCTGTTTGAGCTTCCAGAATTGCGTACCACAGCTTCTGGGCTTTGATAGAT 153 Query 178205 TTTTTGGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAG 178264 | | | ||||| || || ||||| | ||| || | |||||||| ||||| Sbjct 152 GTGCGGCCACGGCCTTCCTTTTCATACTTCTCGTAAAGGGCTTCGAATTCATCGCCATAC 93 Query 178265 ACATCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCA---CTGACCGTCTTCC 178321 || || | ||||| ||||||||||||||||||||||| |||| |||| |||| | Sbjct 92 ACGTCGGCCAGACCAGGAGCCTCATTGGGGCAGAAGAGTGTCCAATCCTGA--TTCTT-C 36 Query 178322 TTCACTCGTTTCATGAAGAGGTCAGAGGTCCA 178353 | || || |||||||| | || | |||||| Sbjct 35 TCGACCCGCTTCATGAACAAATCCGGGGTCCA 4 >seq9 Length=790667 Score = 89.7 bits (98), Expect = 1e-12 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || |||||||| || ||||| || |||||||| || || | || || | ||||| Sbjct 434607 AGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGACAGAGTACGGCCATCC 434666 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 || |||||||| || |||||||| || || || || || ||||| | ||||||||||| Sbjct 434667 TCAAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGAGGGATCCCTTCCTTGTC 434725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159149490073685