Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03-
01] 169 sequences; 23,712,134 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq15 187 6e-42
seq5 125 2e-23
seq82 100 7e-16
seq9 89.7 1e-12
>seq15
Length=722239
Score = 187 bits (206), Expect = 6e-42
Identities = 163/203 (80%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949
|| ||| || | |||||||||||||| ||||| ||||| |||||||| ||||| | ||
Sbjct 457560 TCCACGCAGACGAAGGACAAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCGGAGAG 457619
Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009
|||| || ||||| ||||||||||| |||||||| | ||| || |||||||||||||
Sbjct 457620 CGTCCGGCCGTCTTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGAGGAAT 457679
Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069
||||||||| ||||| ||||| || ||||| |||||||||||||| ||||||||
Sbjct 457680 TCCTTCCTTATCCTGAATCTTGCTCTTGACGTTGTCGATGGTGTCAGATGACTCAACCTC 457739
Query 211070 GAGAGTGATCGTCTTTCCCGTGA 211092
|| ||||| ||||| || ||||
Sbjct 457740 AAGGGTGATGGTCTTGCCGGTGA 457762
Score = 179 bits (198), Expect = 9e-40
Identities = 167/212 (79%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || |||||||| || || ||||| |||||||| || || | ||||| | ||||||
Sbjct 457054 AGCACGAGGTGAAGGGTTGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCT 457113
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| ||||||||||| || || |||||||| || | ||||||||||||
Sbjct 457114 TCTAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCC 457173
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| ||||| || ||||||||||| || || ||||| | ||||||||||
Sbjct 457174 TGAATCTTCGACTTCACATTGTCGATGGTGTCTGAAGACTCCACCTCCAAAGTGATCGTC 457233
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| || ||||| || || | ||||||
Sbjct 457234 TTACCCGTCAGGGTCTTAACGAAGATCTGCAT 457265
Score = 145 bits (160), Expect = 2e-29
Identities = 152/200 (76%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || || || || || || ||||| |||||||| || || | ||||| | ||||||
Sbjct 457282 AGCACCAGATGGAGGGTTGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCT 457341
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| || || ||||| |||||||| | ||||| ||||| ||||| | ||||||||||||
Sbjct 457342 TCGAGTTGTTTGCCGGCGAAGATCAAACGTTGCTGGTCGGGAGGGATTCCTTCCTTGTCT 457401
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| |||||| ||||| || ||||| ||||| || || ||||| | ||||| |||
Sbjct 457402 TGAATCTTTGACTTCACATTGTCGATCGTGTCTGACGACTCGACCTCCAAGGTGATGGTC 457461
Query 211083 TTTCCCGTGAGAGTCTTTAC 211102
|| || ||||||||||| ||
Sbjct 457462 TTGCCAGTGAGAGTCTTGAC 457481
Score = 134 bits (148), Expect = 3e-26
Identities = 145/192 (76%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 210923 CTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAA 210982
||| || |||||||| || || | ||| || | ||||| ||||||||||| || |||||
Sbjct 456618 CTCCTTCTGGATGTTGTAGTCTGAAAGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAA 456677
Query 210983 GATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTT 211042
||| | || || ||||| ||||| | || ||||| || || |||||| ||| |||||
Sbjct 456678 GATCAATCGCTGCTGGTCTGGAGGGATACCCTCCTTATCTTGAATCTTTGATTTGACGTT 456737
Query 211043 TTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTAC 211102
|| || || ||||| ||| |||||||| || ||||| || || || |||||||| ||
Sbjct 456738 GTCAATCGTATCAGAAGATTCGACCTCGAGGGTAATCGTTTTCCCAGTCAGAGTCTTGAC 456797
Query 211103 AAACACCTGCAT 211114
|| | ||||||
Sbjct 456798 GAAGATCTGCAT 456809
Score = 129 bits (142), Expect = 1e-24
Identities = 158/213 (74%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATC 210961
||||| | ||| | |||| ||| || || ||||| || || | ||| | | | |||||
Sbjct 456826 AGGACCAAGTGCAAAGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAATG-TACGGCCATC 456884
Query 210962 TTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021
|||||||| || || |||||||| | || || ||||| || || | || ||||||||
Sbjct 456885 CTCCAGCTGTTTACCAGCGAAGATCAACCGCTGCTGGTCTGGTGGGATACCCTCCTTGTC 456944
Query 211022 CTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGT 211081
|||||||| ||| || || |||||||| || ||| |||||| || || ||||||||
Sbjct 456945 TTGGATCTTGGATTTGACATTGTCGATGGTATCGGAGGATTCAACTTCTAGTGTGATCGT 457004
Query 211082 CTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||| || || |||||||| || || | |||||
Sbjct 457005 CTTGCCGGTCAGAGTCTTGACGAAGATTTGCAT 457037
>seq5
Length=849029
Score = 125 bits (138), Expect = 2e-23
Identities = 135/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| |||||||| || || | ||| |||| |||||| || ||||||||||| ||||||||
Sbjct 477694 TTCTGGATGTTGTAGTCGGAAAGTGTCCGTCCATCCTCGAGCTGCTTGCCAGCGAAGATT 477753
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
| || || || || || |||| ||| ||||| ||||||||||| || || || |||
Sbjct 477754 AAACGCTGCTGATCCGGGGGAATTCCCTCCTTATCCTGGATCTTCGACTTGACATTGTCG 477813
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105
|| ||||| | || ||||| || ||||| ||||| ||||| || ||||| || ||
Sbjct 477814 ATTGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGAA 477872
>seq82
Length=10320
Score = 100 bits (110), Expect = 7e-16
Identities = 188/272 (69%), Gaps = 12/272 (4%)
Strand=Plus/Minus
Query 178088 CCAAAGTTCTTTTGGTTGCTCTTTC---TGCAAATGGCATCTTTGTACGCAATGAAGGGC 178144
|||| || || ||||||||||| | ||||| ||||| ||||| ||||||||
Sbjct 269 CCAAGATTTTTCTGGTTGCTCTTGCGGTTGCAA---GCATCCTTGTAAAGCATGAAGGGG 213
Query 178145 ATTCCCACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTC 178204
|||| ||| | |||||| | ||||| | ||| |||| ||||||| || ||
Sbjct 212 TTTCCGGTCTCTGTTTGAGCTTCCAGAATTGCGTACCACAGCTTCTGGGCTTTGATAGAT 153
Query 178205 TTTTTGGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAG 178264
| | | ||||| || || ||||| | ||| || | |||||||| |||||
Sbjct 152 GTGCGGCCACGGCCTTCCTTTTCATACTTCTCGTAAAGGGCTTCGAATTCATCGCCATAC 93
Query 178265 ACATCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCA---CTGACCGTCTTCC 178321
|| || | ||||| ||||||||||||||||||||||| |||| |||| |||| |
Sbjct 92 ACGTCGGCCAGACCAGGAGCCTCATTGGGGCAGAAGAGTGTCCAATCCTGA--TTCTT-C 36
Query 178322 TTCACTCGTTTCATGAAGAGGTCAGAGGTCCA 178353
| || || |||||||| | || | ||||||
Sbjct 35 TCGACCCGCTTCATGAACAAATCCGGGGTCCA 4
>seq9
Length=790667
Score = 89.7 bits (98), Expect = 1e-12
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || |||||||| || ||||| || |||||||| || || | || || | |||||
Sbjct 434607 AGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGACAGAGTACGGCCATCC 434666
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021
|| |||||||| || |||||||| || || || || || ||||| | |||||||||||
Sbjct 434667 TCAAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGAGGGATCCCTTCCTTGTC 434725
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159149490073685
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |