Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq15 179 9e-40 seq5 98.7 2e-15 >seq15 Length=722239 Score = 179 bits (198), Expect = 9e-40 Identities = 167/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| || || |||||||| |||| ||||| |||| || || | |||||| Sbjct 457054 AGCACGAGGTGAAGGGTTGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCT 457113 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 ||||||||||| |||||||||||||| || || ||||| ||||| || ||||||||||| Sbjct 457114 TCTAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCC 457173 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||||||| |||||||||||||| | ||||| || || ||||||||| Sbjct 457174 TGAATCTTCGACTTCACATTGTCGATGGTGTCTGAAGACTCCACCTCCAAAGTGATCGTC 457233 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || ||||||| || || | ||| | ||||| Sbjct 457234 TTACCCGTCAGGGTCTTAACGAAGATCTGCAT 457265 Score = 149 bits (164), Expect = 1e-30 Identities = 151/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || || ||||| || |||||||| |||| ||||| |||| || || | |||||| Sbjct 457282 AGCACCAGATGGAGGGTTGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCT 457341 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || || || || |||||||| | ||||| |||||||| || || |||||||||||| Sbjct 457342 TCGAGTTGTTTGCCGGCGAAGATCAAACGTTGCTGGTCGGGAGGGATTCCTTCCTTGTCT 457401 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || |||||| ||||||| ||||| |||||||| | || || || || ||||| ||| Sbjct 457402 TGAATCTTTGACTTCACATTGTCGATCGTGTCTGACGACTCGACCTCCAAGGTGATGGTC 457461 Query 225682 TTGCCCGTCAAAGTTTT 225698 ||||| || | ||| || Sbjct 457462 TTGCCAGTGAGAGTCTT 457478 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | ||| | |||| || || || | ||||| ||| ||| || | ||||| Sbjct 456826 AGGACCAAGTGCAAAGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAATGTACGGCCATCC 456885 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || ||||||||||| | || || ||||| || || ||||| ||||||||| Sbjct 456886 TCCAGCTGTTTACCAGCGAAGATCAACCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCT 456945 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| || ||| |||||||| || |||| ||| || |||| ||||||||| Sbjct 456946 TGGATCTTGGATTTGACATTGTCGATGGTATCGGAGGATTCAACTTCTAGTGTGATCGTC 457005 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||| ||| || | ||| | |||||| Sbjct 457006 TTGCCGGTCAGAGTCTTGACGAAGATTTGCAT 457037 Score = 136 bits (150), Expect = 9e-27 Identities = 143/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||||||||| || ||||||||||| |||| |||||||||| | || | || ||| Sbjct 457573 AGGACAAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCGGAGAGCGTCCGGCCGTCT 457632 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| | || || ||||| || ||||| |||||||| || Sbjct 457633 TCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGAGGAATTCCTTCCTTATCC 457692 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| || ||||||||||| || | || || || | ||||| ||| Sbjct 457693 TGAATCTTGCTCTTGACGTTGTCGATGGTGTCAGATGACTCAACCTCAAGGGTGATGGTC 457752 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 457753 TTGCCGGT 457760 Score = 98.7 bits (108), Expect = 2e-15 Identities = 155/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || | ||| || || || || |||| ||||| || | | ||| Sbjct 456588 ACGGAGACGCAGCACCAAGTGCAGGGTACTCTCCTTCTGGATGTTGTAGTCTGAAAGAGT 456647 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| ||||||||||| | ||| || ||||| || || ||||| Sbjct 456648 ACGGCCATCCTCCAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCTGGAGGGATACC 456707 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||| ||||| |||||| || || || || || || || | ||| || || | Sbjct 456708 CTCCTTATCTTGAATCTTTGATTTGACGTTGTCAATCGTATCAGAAGATTCGACCTCGAG 456767 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || ||||| || || |||| ||| || | ||| | ||||| Sbjct 456768 GGTAATCGTTTTCCCAGTCAGAGTCTTGACGAAGATCTGCAT 456809 >seq5 Length=849029 Score = 98.7 bits (108), Expect = 2e-15 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| |||| | || | ||||| || |||||||| ||||||||||| Sbjct 477694 TTCTGGATGTTGTAGTCGGAAAGTGTCCGTCCATCCTCGAGCTGCTTGCCAGCGAAGATT 477753 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 | || || || || || ||||| || ||||| || |||||||| ||| ||| ||| Sbjct 477754 AAACGCTGCTGATCCGGGGGAATTCCCTCCTTATCCTGGATCTTCGACTTGACATTGTCG 477813 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 || ||||| || || || || | ||||| ||||||||||||| || || | ||| Sbjct 477814 ATTGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGAA 477872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192528617797286