Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq57 131 2e-25 seq2 102 1e-16 >seq57 Length=16334 Score = 131 bits (144), Expect = 2e-25 Identities = 268/400 (67%), Gaps = 0/400 (0%) Strand=Plus/Minus Query 77964 TCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCA 78023 ||||| ||||| | | || ||| || || | || || || ||||| || | ||| Sbjct 16330 TCATTGGGGCAGAAGAGTGTCCAATCCTGATTCTTCTCGACCCGCTTCATGAACAAATCC 16271 Query 78024 GGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTT 78083 || ||||||| || | ||||| || |||| | | |||||| || || |||||| Sbjct 16270 GGGGTCCATAGRGCGAGGAATAGGTCACGGGCGCGAACTTCTTCTTTGCCGTGGTTCTTT 16211 Query 78084 TTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACT 78143 || ||||||||||| | | ||||| |||||| || || ||||| || || | | | Sbjct 16210 CGTAGGTCGAGAAACTCGAACACATCAGCATGCCAAGGCTCAAGATAGATAGCAAAAGCA 16151 Query 78144 CCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAAC 78203 || || || || || || || || || | ||||||||||| || || | || | | | Sbjct 16150 CCTGGACGCTTGTTGCCACCTTGGTCGACGTATCTGGCGGTATTGTTGAACACGCGAAGC 16091 Query 78204 ATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGA 78263 || |||| |||||||| || | ||||| ||||| || || || || | ||||| Sbjct 16090 ATCGGAACGATACCGTTGGAGGAACCATTAGTTCCTGAGATGTATGAACCTGTGGCGCGG 16031 Query 78264 ATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTC 78323 || ||| | || || || || || |||| || || | || ||| ||| Sbjct 16030 ATGCGGTGGATGTTGAGACCAATACCACCAGCGGTCTTGGAGATCATGGCACAAGTCTTC 15971 Query 78324 AATGTATCGTAGATACCCTCTATACTGTCATCCATCATGT 78363 || || ||||| ||||| || || ||||| ||| |||||| Sbjct 15970 AAGGTGTCGTASATACCTTCAATGCTGTCTTCCTTCATGT 15931 >seq2 Length=1065396 Score = 102 bits (112), Expect = 1e-16 Identities = 202/297 (68%), Gaps = 9/297 (3%) Strand=Plus/Plus Query 48401 ATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGC 48460 ||| || | ||| ||||| || | ||| || | || || || || || || || Sbjct 669227 ATCCTTGATGTAGGTATCAATGAGAAGCGAGTAGGTCTCAGAATGGATGTTCTCCATCAT 669286 Query 48461 CATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTC 48520 ||||| || ||||| ||||| | ||| || | ||||| ||||| | |||| ||| Sbjct 669287 AATCTGGAACCCGTAGAAACAGCGCGCCTCAGGAATCTGAACCTCTCCGCTGAATCTTTC 669346 Query 48521 AGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAAT 48580 | | |||||| || || || || ||| |||||| || || || | ||||| || Sbjct 669347 GACAAGATTCTCGTTCACGATGCCGTCAGAAGCAGCGAAGAAGGCAAGGACATGAGATAT 669406 Query 48581 AAAATATTTTTC------GTTGGAAGTCAGTTTATTCCAGTCATTGATATCTTTTGATAT 48634 || || ||| |||| || | ||| ||||||||| | || ||||| || | Sbjct 669407 GAAGTAGCGTTCATCATCGTTG--AGACGGTT-ATTCCAGTCGTGGAGGTCTTTGGAAAG 669463 Query 48635 ATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691 ||| | |||||||| |||||||| |||||||| || || |||||||| | |||||| Sbjct 669464 ATCGATCTCTTCAGCAGTCCAAAAGGATGCCTCGGCCTTCTTATACATCTGCCATAT 669520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694667332512160