Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03-
01] 169 sequences; 23,712,134 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq57 131 2e-25
seq2 102 1e-16
>seq57
Length=16334
Score = 131 bits (144), Expect = 2e-25
Identities = 268/400 (67%), Gaps = 0/400 (0%)
Strand=Plus/Minus
Query 77964 TCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCA 78023
||||| ||||| | | || ||| || || | || || || ||||| || | |||
Sbjct 16330 TCATTGGGGCAGAAGAGTGTCCAATCCTGATTCTTCTCGACCCGCTTCATGAACAAATCC 16271
Query 78024 GGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTT 78083
|| ||||||| || | ||||| || |||| | | |||||| || || ||||||
Sbjct 16270 GGGGTCCATAGRGCGAGGAATAGGTCACGGGCGCGAACTTCTTCTTTGCCGTGGTTCTTT 16211
Query 78084 TTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACT 78143
|| ||||||||||| | | ||||| |||||| || || ||||| || || | | |
Sbjct 16210 CGTAGGTCGAGAAACTCGAACACATCAGCATGCCAAGGCTCAAGATAGATAGCAAAAGCA 16151
Query 78144 CCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAAC 78203
|| || || || || || || || || | ||||||||||| || || | || | | |
Sbjct 16150 CCTGGACGCTTGTTGCCACCTTGGTCGACGTATCTGGCGGTATTGTTGAACACGCGAAGC 16091
Query 78204 ATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGA 78263
|| |||| |||||||| || | ||||| ||||| || || || || | |||||
Sbjct 16090 ATCGGAACGATACCGTTGGAGGAACCATTAGTTCCTGAGATGTATGAACCTGTGGCGCGG 16031
Query 78264 ATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTC 78323
|| ||| | || || || || || |||| || || | || ||| |||
Sbjct 16030 ATGCGGTGGATGTTGAGACCAATACCACCAGCGGTCTTGGAGATCATGGCACAAGTCTTC 15971
Query 78324 AATGTATCGTAGATACCCTCTATACTGTCATCCATCATGT 78363
|| || ||||| ||||| || || ||||| ||| ||||||
Sbjct 15970 AAGGTGTCGTASATACCTTCAATGCTGTCTTCCTTCATGT 15931
>seq2
Length=1065396
Score = 102 bits (112), Expect = 1e-16
Identities = 202/297 (68%), Gaps = 9/297 (3%)
Strand=Plus/Plus
Query 48401 ATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGC 48460
||| || | ||| ||||| || | ||| || | || || || || || || ||
Sbjct 669227 ATCCTTGATGTAGGTATCAATGAGAAGCGAGTAGGTCTCAGAATGGATGTTCTCCATCAT 669286
Query 48461 CATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTC 48520
||||| || ||||| ||||| | ||| || | ||||| ||||| | |||| |||
Sbjct 669287 AATCTGGAACCCGTAGAAACAGCGCGCCTCAGGAATCTGAACCTCTCCGCTGAATCTTTC 669346
Query 48521 AGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAAT 48580
| | |||||| || || || || ||| |||||| || || || | ||||| ||
Sbjct 669347 GACAAGATTCTCGTTCACGATGCCGTCAGAAGCAGCGAAGAAGGCAAGGACATGAGATAT 669406
Query 48581 AAAATATTTTTC------GTTGGAAGTCAGTTTATTCCAGTCATTGATATCTTTTGATAT 48634
|| || ||| |||| || | ||| ||||||||| | || ||||| || |
Sbjct 669407 GAAGTAGCGTTCATCATCGTTG--AGACGGTT-ATTCCAGTCGTGGAGGTCTTTGGAAAG 669463
Query 48635 ATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691
||| | |||||||| |||||||| |||||||| || || |||||||| | ||||||
Sbjct 669464 ATCGATCTCTTCAGCAGTCCAAAAGGATGCCTCGGCCTTCTTATACATCTGCCATAT 669520
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694667332512160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |