Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq2 127 3e-24 >seq2 Length=1065396 Score = 127 bits (140), Expect = 3e-24 Identities = 187/259 (72%), Gaps = 7/259 (3%) Strand=Plus/Plus Query 46927 TCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATC 46986 || ||||| ||||| || || ||||| || ||||| ||||| | || |||| |||| Sbjct 669264 TCAGAATGGATGTTCTCCATCATAATCTGGAACCCGTAGAAACAGCGCGCCTCAGGAATC 669323 Query 46987 TGTACCTCTGTACAAAATCGTTCAGACAA-ATTCTCATTCACTATTCCATCACTAGCAGC 47045 || |||||| | |||| ||| ||||| |||||| ||||| || || ||| |||||| Sbjct 669324 TGAACCTCTCCGCTGAATCTTTC-GACAAGATTCTCGTTCACGATGCCGTCAGAAGCAGC 669382 Query 47046 AAAAAATGCCAATACATGTTTAATAAAATA---TTTTTCATCGGT-AGTCAGTTTATTCC 47101 || || || | ||||| || || || || |||||| | || | ||| ||||| Sbjct 669383 GAAGAAGGCAAGGACATGAGATATGAAGTAGCGTTCATCATCGTTGAGACGGTT-ATTCC 669441 Query 47102 AGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTT 47161 |||| | || ||||| || | ||| | |||||||| ||||| || || ||||| || | Sbjct 669442 AGTCGTGGAGGTCTTTGGAAAGATCGATCTCTTCAGCAGTCCAAAAGGATGCCTCGGCCT 669501 Query 47162 TTTTATACATATTCCATAT 47180 | |||||||| | |||||| Sbjct 669502 TCTTATACATCTGCCATAT 669520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712932893926080