Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq15 143 6e-29 >seq15 Length=722239 Score = 143 bits (158), Expect = 6e-29 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || || ||||| || || ||||| ||||||||||| |||| | || | Sbjct 457047 GAGACGGAGCACGAGGTGAAGGGTTGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCG 457106 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||||||||| || || ||||||||||| | ||||||||| | || ||| ||||| Sbjct 457107 GCCATCTTCTAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGCGGGATGCCTTC 457166 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || ||||| || || ||| | || | | |||||||| ||| || || | ||| Sbjct 457167 CTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTGTCTGAAGACTCCACCTCCAAAGT 457226 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| || ||||| ||||||| |||||| Sbjct 457227 GATCGTCTTACCCGTCAGGGTCTTAACGAAGATCTGCAT 457265 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || ||||| || || || ||||| ||||||||||| |||| | || | Sbjct 457275 GAGACGGAGCACCAGATGGAGGGTTGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCG 457334 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||||| || ||| ||||||||||| | | |||||||| | | ||||||||| Sbjct 457335 GCCATCTTCGAGTTGTTTGCCGGCGAAGATCAAACGTTGCTGGTCGGGAGGGATTCCTTC 457394 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| |||||||| ||| || ||| | || | ||||||| ||| || || | || Sbjct 457395 CTTGTCTTGAATCTTTGACTTCACATTGTCGATCGTGTCTGACGACTCGACCTCCAAGGT 457454 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGA 152094 || || ||||| ||||||||||| |||| Sbjct 457455 GATGGTCTTGCCAGTGAGAGTCTTGACGA 457483 Score = 105 bits (116), Expect = 2e-17 Identities = 149/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || ||| ||| || ||||||||||| || | | ||| | ||||| || | Sbjct 456603 CAAG-TGCAGGGTACTCTCCTTCTGGATGTTGTAGTCTGAAAGAGTACGGCCATCCTCCA 456661 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || |||||||| | | ||||||||| | | ||| || ||||| ||||||| Sbjct 456662 GCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCTGGAGGGATACCCTCCTTATCTTGAA 456721 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | ||| |||||| | || | | || ||| || || || || ||||| ||||| | Sbjct 456722 TCTTTGATTTGACGTTGTCAATCGTATCAGAAGATTCGACCTCGAGGGTAATCGTTTTCC 456781 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || |||||||| ||||||| |||||| Sbjct 456782 CAGTCAGAGTCTTGACGAAGATCTGCAT 456809 Score = 104 bits (114), Expect = 5e-17 Identities = 137/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| ||||| || || ||||| |||||||||||||||| | || | || ||| Sbjct 457573 AGGACAAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCGGAGAGCGTCCGGCCGTCT 457632 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || |||||||| | | ||||||||| | | ||||||||||| || Sbjct 457633 TCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGAGGAATTCCTTCCTTATCC 457692 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || ||||| | || | | |||| || ||| || ||||| || || || Sbjct 457693 TGAATCTTGCTCTTGACGTTGTCGATGGTGTCAGATGACTCAACCTCAAGGGTGATGGTC 457752 Query 152073 TTGCCCGTGA 152082 ||||| |||| Sbjct 457753 TTGCCGGTGA 457762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153818301617399