Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq15 187 5e-42 seq5 120 6e-22 seq9 87.8 4e-12 >seq15 Length=722239 Score = 187 bits (206), Expect = 5e-42 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| ||||| |||| || || ||||| || || || ||||||||||| Sbjct 456810 ACCACCACGCAGACGAAGGACCAAGTGCAAAGTGCTCTCCTTCTGAATGTTGTAGTCGCT 456869 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || ||||||||||| || ||||| || || |||||||| || || ||||| || Sbjct 456870 CAATGTACGGCCATCCTCCAGCTGTTTACCAGCGAAGATCAACCGCTGCTGGTCTGGTGG 456929 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||||||||||||||| | ||| || | ||||| || || || | ||| || Sbjct 456930 GATACCCTCCTTGTCTTGGATCTTGGATTTGACATTGTCGATGGTATCGGAGGATTCAAC 456989 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| || ||||||||||| || |||| |||||| ||||| || ||||| Sbjct 456990 TTCTAGTGTGATCGTCTTGCCGGTCAGAGTCTTGACGAAGATTTGCAT 457037 Score = 179 bits (198), Expect = 8e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || || |||| || | || || || || |||||||||||||| | | Sbjct 456583 CCACCACGGAGACGCAGCACCAAGTGCAGGGTACTCTCCTTCTGGATGTTGTAGTCTGAA 456642 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || ||||||||||| || || || || || |||||||| || || ||||| || Sbjct 456643 AGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCTGGAGGG 456702 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||||||||| ||||| ||||||| ||| ||| | || || || || |||| |||||| Sbjct 456703 ATACCCTCCTTATCTTGAATCTTTGATTTGACGTTGTCAATCGTATCAGAAGATTCGACC 456762 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || ||||| || || |||| |||||| ||||| |||||||| Sbjct 456763 TCGAGGGTAATCGTTTTCCCAGTCAGAGTCTTGACGAAGATCTGCAT 456809 Score = 178 bits (196), Expect = 3e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || || || | || |||||| |||||||||||||| | Sbjct 457038 ACCACCACGGAGACGGAGCACGAGGTGAAGGGTTGATTCTTTCTGGATGTTGTAGTCGGA 457097 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||||||||| ||||| || || || || ||||| | ||| || |||||| ||| Sbjct 457098 CAGGGTGCGGCCATCTTCTAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGCGG 457157 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || |||||||| || ||||| | || || | ||||| ||||| |||| || || Sbjct 457158 GATGCCTTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTGTCTGAAGACTCCAC 457217 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | |||||||||||||||||||| ||||||||||| |||||||| Sbjct 457218 CTCCAAAGTGATCGTCTTACCCGTCAGGGTCTTAACGAAGATCTGCAT 457265 Score = 172 bits (190), Expect = 1e-37 Identities = 169/218 (78%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||||||| | || |||||| |||||||||||||| | Sbjct 457266 ACCACCACGGAGACGGAGCACCAGATGGAGGGTTGATTCTTTCTGGATGTTGTAGTCGGA 457325 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||||||||| || |||||||| ||||| |||||||||||||| ||||| || Sbjct 457326 CAGGGTGCGGCCATCTTCGAGTTGTTTGCCGGCGAAGATCAAACGTTGCTGGTCGGGAGG 457385 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || ||||||||||| ||||||| || || | ||||| ||||| || | ||||| Sbjct 457386 GATTCCTTCCTTGTCTTGAATCTTTGACTTCACATTGTCGATCGTGTCTGACGACTCGAC 457445 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089 || | ||||| ||||| || || | |||||| |||| Sbjct 457446 CTCCAAGGTGATGGTCTTGCCAGTGAGAGTCTTGACGA 457483 Score = 127 bits (140), Expect = 4e-24 Identities = 152/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || |||||||| ||||| || || || | ||| |||||| ||||||||||| || | Sbjct 457558 CCTCCACGCAGACGAAGGACAAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCGGAG 457617 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||| ||||| || || || || || || || |||||||| || || |||||| ||| Sbjct 457618 AGCGTCCGGCCGTCTTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGAGGA 457677 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || ||||| || || ||| ||||| || ||| | ||||| ||||| || | || || Sbjct 457678 ATTCCTTCCTTATCCTGAATC-TTGCTCTTGACGTTGTCGATGGTGTCAGATGACTCAAC 457736 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 || || ||||| ||||| || || Sbjct 457737 CTCAAGGGTGATGGTCTTGCCGGT 457760 >seq5 Length=849029 Score = 120 bits (132), Expect = 6e-22 Identities = 134/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| | ||| || || |||||||| || || || || || ||||| Sbjct 477694 TTCTGGATGTTGTAGTCGGAAAGTGTCCGTCCATCCTCGAGCTGCTTGCCAGCGAAGATT 477753 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 ||||| || || || ||||| |||||||| || |||||||| | || || | ||| Sbjct 477754 AAACGCTGCTGATCCGGGGGAATTCCCTCCTTATCCTGGATCTTCGACTTGACATTGTCG 477813 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || ||||| | ||||| || || ||||| ||||| ||||||| ||||| ||||| Sbjct 477814 ATTGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGAA 477872 >seq9 Length=790667 Score = 87.8 bits (96), Expect = 4e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| |||||||| || || || || || | || || || |||||||||||||||| Sbjct 434591 ACCGCCACGCAGACGGAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGA 434650 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||||||||| || || || ||||| ||||||| ||| || || || || Sbjct 434651 CAGAGTACGGCCATCCTCAAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGAGG 434710 Query 282992 AATACCCTCCTTGTCT 283007 || || ||||||||| Sbjct 434711 GATCCCTTCCTTGTCT 434726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046736933482526