Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq15 136 3e-27 seq5 111 1e-19 seq9 86.0 5e-12 >seq15 Length=722239 Score = 136 bits (150), Expect = 3e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| |||||||| || || || ||||||||||| |||| || ||| | || || Sbjct 457056 CACGAGGTGAAGGGTTGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTC 457115 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| || || ||||| | ||||||||| || | || | |||||||| ||| Sbjct 457116 TAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTG 457175 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 |||||| ||||| | | |||||||| | || |||||||||| || |||||||| Sbjct 457176 AATCTTCGACTTCACATTGTCGATGGTGTCTGAAGACTCCACCTCCAAAGTGATCGTCTT 457235 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| |||||||| |||||||| ||||| Sbjct 457236 ACCCGTCAGGGTCTTAACGAAGATCTGCAT 457265 Score = 127 bits (140), Expect = 1e-24 Identities = 158/214 (74%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184 || ||||| ||| || || |||||||| ||||||||||| || | || || | || Sbjct 456597 CAGCACCAAGTGCAGGGTACTCTCCTTCTGGATGTTGTAGTCTGAAAGAGTACGGCCATC 456656 Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 ||||||||||| || || |||||||| |||||||| |||| ||| | ||| ||||| || Sbjct 456657 CTCCAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCTGGAGGGATACCCTCCTTATC 456716 Query 44245 CGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCG 44303 ||||| || || | ||| | || || || | ||||| ||||| | ||||||| Sbjct 456717 TTGAATCTT-TGATTTGACGTTGTCAATCGTATCAGAAGATTCGACCTCGAGGGTAATCG 456775 Query 44304 TCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || || || ||||| |||||||| ||||| Sbjct 456776 TTTTCCCAGTCAGAGTCTTGACGAAGATCTGCAT 456809 Score = 118 bits (130), Expect = 8e-22 Identities = 154/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| | ||||||||||| || |||||||| ||| | | || | || ||| Sbjct 456829 ACCAAGTGCAAAGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAATGTACGGCCATCCTCC 456888 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 ||||| || || || |||||||| |||||||| |||| || | ||| ||||| || Sbjct 456889 AGCTGTTTACCAGCGAAGATCAACCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCTTGG 456948 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| || || ||| | ||||| |||| |||||| || || | || ||||||| Sbjct 456949 ATCTTGGATTTGACATTGT--CGATGGTATCGGAGGATTCAACTTCTAGTGTGATCGTCT 457006 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || || ||||| |||||||||||||| Sbjct 457007 TGCCGGTCAGAGTCTTGACGAAGATTTGCAT 457037 Score = 104 bits (114), Expect = 2e-17 Identities = 135/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| ||| || || |||||||||||||||| ||| || |||| || Sbjct 457576 ACAAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCGGAGAGCGTCCGGCCGTCTTCA 457635 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || |||||||| |||||||| || | ||| | |||||||| ||| Sbjct 457636 AGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGAGGAATTCCTTCCTTATCCTGA 457695 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | |||||||| | || || ||||| | || || ||||| Sbjct 457696 ATCTTGCTCTTGACGTTGTCGATGGTGTCAGATGACTCAACCTCAAGGGTGATGGTCTTG 457755 Query 44309 CCCGTGA 44315 || |||| Sbjct 457756 CCGGTGA 457762 Score = 95.1 bits (104), Expect = 9e-15 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 |||||| || || || || || ||||||||||| |||| || ||| | || || Sbjct 457284 CACCAGATGGAGGGTTGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTC 457343 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || || || ||||| ||||||||||| ||||| || | ||| | |||||||| || Sbjct 457344 GAGTTGTTTGCCGGCGAAGATCAAACGTTGCTGGTCGGGAGGGATTCCTTCCTTGTCTTG 457403 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||||| | | || ||||| | || || ||||||| || || ||||| Sbjct 457404 AATCTTTGACTTCACATTGTCGATCGTGTCTGACGACTCGACCTCCAAGGTGATGGTCTT 457463 Query 44308 TCCCGTGAGGGTCTTCACGA 44327 || ||||| ||||| |||| Sbjct 457464 GCCAGTGAGAGTCTTGACGA 457483 >seq5 Length=849029 Score = 111 bits (122), Expect = 1e-19 Identities = 136/184 (74%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||| ||||||||||| |||| ||| || | || || |||||||| || || |||| Sbjct 477692 CCTTCTGGATGTTGTAGTCGGAAAGTGTCCGTCCATCCTCGAGCTGCTTGCCAGCGAAGA 477751 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265 | |||||||||||||| | || | || ||||| ||| |||||| ||| || ||| Sbjct 477752 TTAAACGCTGCTGATCCGGGGGAATTCCCTCCTTATCCTGGATCTTCGACTTGACATTGT 477811 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | || |||||| ||| || ||||| | || || ||||| ||||| |||||||| || Sbjct 477812 --CGATTGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGAC 477869 Query 44326 GAAG 44329 |||| Sbjct 477870 GAAG 477873 >seq9 Length=790667 Score = 86.0 bits (94), Expect = 5e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| |||||||| || |||||| ||||||||||| || | || || | || || Sbjct 434609 CACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGACAGAGTACGGCCATCCTC 434668 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||| ||||||| |||||||||||| | ||| | |||||||| || || Sbjct 434669 AAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGAGGGATCCCTTCCTTGTCTGT 434728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989658532273