Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq15 174 4e-38 seq9 93.3 1e-13 >seq15 Length=722239 Score = 174 bits (192), Expect = 4e-38 Identities = 158/199 (79%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || |||||||| || || || |||||| | ||||| || |||||||| |||| Sbjct 457483 TCGTCAAGACTCTCACTGGCAAGACCATCACCTTGGAGGTCGAGTCGTCAGACACGATCG 457424 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | || || || ||||||||| ||||| |||||||||||||| ||||||||||| | | Sbjct 457423 ACAATGTGAAGTCAAAGATTCAAGACAAGGAAGGAATCCCTCCCGACCAGCAACGTTTGA 457364 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 |||||||||| ||||| ||||||||||| | || || |||| || ||| |||| |||| Sbjct 457363 TCTTCGCCGGCAAACAACTCGAAGATGGCCGCACCCTGTCCGACTACAACATCCAGAAAG 457304 Query 178111 AATCAACACTGCATCTTGT 178129 ||||||| || ||||| || Sbjct 457303 AATCAACCCTCCATCTGGT 457285 Score = 159 bits (176), Expect = 8e-34 Identities = 159/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || || |||||||| | |||||||| |||||| Sbjct 457262 CAGATCTTCGTTAAGACCCTGACGGGTAAGACGATCACTTTGGAGGTGGAGTCTTCAGAC 457203 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || |||||||||||||| ||||| ||||| || |||||||| Sbjct 457202 ACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAAGGCATCCCGCCTGACCAGCAG 457143 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || || ||||| |||||||| | || || |||| || ||| || Sbjct 457142 CGTCTTATCTTCGCTGGCAAGCAGCTAGAAGATGGCCGCACCCTGTCCGACTACAACATC 457083 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || ||||||||||| || || || || Sbjct 457082 CAGAAAGAATCAACCCTTCACCTCGT 457057 Score = 152 bits (168), Expect = 1e-31 Identities = 146/187 (78%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002 |||| || || || |||||||| ||||| || || ||||||||||| |||||||| Sbjct 457762 TCACCGGCAAGACCATCACCCTTGAGGTTGAGTCATCTGACACCATCGACAACGTCAAGA 457703 Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 ||||||||||| || |||||||| ||||| |||||||| || | |||||||| || | Sbjct 457702 GCAAGATTCAGGATAAGGAAGGAATTCCTCCTGACCAGCAGCGCTTGATCTTCGCTGGCA 457643 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122 | ||||| ||||| || |||| || ||||||| ||| |||| |||||||| || || | Sbjct 457642 AGCAGCTTGAAGACGGCCGGACGCTCTCCGATTACAACATCCAGAAAGAATCCACCCTTC 457583 Query 178123 ATCTTGT 178129 | ||||| Sbjct 457582 ACCTTGT 457576 Score = 145 bits (160), Expect = 2e-29 Identities = 145/188 (77%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||||| || || |||||||| ||||||||||| ||| || || Sbjct 456806 CAGATCTTCGTCAAGACTCTGACTGGGAAAACGATTACCCTCGAGGTCGAATCTTCTGAT 456747 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||||||| ||||||||| || || || || |||||||| |||||||| Sbjct 456746 ACGATTGACAACGTCAAATCAAAGATTCAAGATAAGGAGGGTATCCCTCCAGACCAGCAG 456687 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | |||||||| || || ||||| || ||||| | |||||| | || || ||| || Sbjct 456686 CGATTGATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGTACTCTTTCAGACTACAACATC 456627 Query 178104 CAAAAAGA 178111 || || || Sbjct 456626 CAGAAGGA 456619 >seq9 Length=790667 Score = 93.3 bits (102), Expect = 1e-13 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073 ||||| ||||| ||||||||||| ||||| || || |||||||||||||| ||||| || Sbjct 434725 GACAAGGAAGGGATCCCTCCGGATCAGCAGCGTCTGATCTTCGCCGGAAAGCAGCTTGAG 434666 Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 ||||| | ||||| | || || ||| |||| || || || || || || || || Sbjct 434665 GATGGCCGTACTCTGTCTGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGT 434610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203728593545786