Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03- 01] 169 sequences; 23,712,134 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq15 138 1e-27 seq5 113 4e-20 >seq15 Length=722239 Score = 138 bits (152), Expect = 1e-27 Identities = 171/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||| || || || || || ||||| ||||| |||||||| Sbjct 457039 CCACCACGGAGACGGAGCACGAGGTGAAGGGTTGATTCTTTCTGGATGTTGTAGTCGGAC 457098 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || ||||||||||| ||||| || || ||||| ||||| | || Sbjct 457099 AGGGTGCGGCCATCTTCTAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGCGGG 457158 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || ||||||||| ||| | || | |||| || | | | ||||| ||||||| Sbjct 457159 ATGCCTTCCTTGTCC-TGAATCTTCGACTTC-ACATTGTCGATGGTGTCTGAAGACTCCA 457216 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| || ||||| ||||||||||| ||||| ||||| |||||||| Sbjct 457217 CCTCCAAAGTGATCGTCTTACCCGTCAGGGTCTTAACGAAGATCTGCAT 457265 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| ||||| || ||||||||||| ||||| ||||| || Sbjct 456583 CCACCACGGAGACGCAGCACCAAGTGCAGGGTACTCTCCTTCTGGATGTTGTAGTCTGAA 456642 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || || |||||||| || ||||| |||| ||||| ||||| | || Sbjct 456643 AGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCTGGAGGG 456702 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||| | | ||| | |||| || ||| | | | || || || || || Sbjct 456703 ATACCCTCCTTAT-CTTGAATCTTTGATTTGACGTTGTCAATCGTATCAGAAGATTCGAC 456761 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || |||||||| || ||||| ||||| ||||| |||||||| Sbjct 456762 CTCGAGGGTAATCGTTTTCCCAGTCAGAGTCTTGACGAAGATCTGCAT 456809 Score = 105 bits (116), Expect = 6e-18 Identities = 158/219 (72%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||||||| || || || ||||| ||||| |||||||| Sbjct 457267 CCACCACGGAGACGGAGCACCAGATGGAGGGTTGATTCTTTCTGGATGTTGTAGTCGGAC 457326 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || ||||| || ||||||||||| |||| || || ||||| | || Sbjct 457327 AGGGTGCGGCCATCTTCGAGTTGTTTGCCGGCGAAGATCAAACGTTGCTGGTCGGGAGGG 457386 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | ||||||| | ||| | |||| |||| || | | | ||||| |||||| | Sbjct 457387 ATTCCTTCCTTGT-CTTGAATCTTTGACTTC-ACATTGTCGATCGTGTCTGACGACTCGA 457444 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852 |||||| || || || || || || || ||||| |||| Sbjct 457445 CCTCCAAGGTGATGGTCTTGCCAGTGAGAGTCTTGACGA 457483 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| |||| |||||||||||||||||||| |||||| Sbjct 456811 CCACCACGCAGACGAAGGACCAAGTGCAAAGTGCTCTCCTTCTGAATGTTGTAGTCGCTC 456870 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | || || | || || ||||| || || ||||| |||| ||||| ||||| | || Sbjct 456871 AATGTACGGCCATCCTCCAGCTGTTTACCAGCGAAGATCAACCGCTGCTGGTCTGGTGGG 456930 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||| | || | || | || || | | | || ||| || || || Sbjct 456931 ATACCCTCCTTGT-CTTGGATCTTGGATTTGACATTGTCGATGGTATCGGAGGATTCAAC 456989 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || ||||| || || ||||| ||||| ||||| || ||||| Sbjct 456990 TTCTAGTGTGATCGTCTTGCCGGTCAGAGTCTTGACGAAGATTTGCAT 457037 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | || || || || ||| || ||||| ||||| || ||||| Sbjct 457557 GCCTCCACGCAGACGAAGGACAAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCGGA 457616 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||| || || |||| || ||||||||||| ||||| |||| |||||| ||||| | || Sbjct 457617 GAGCGTCCGGCCGTCTTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGAGG 457676 Query 41755 AACGCTCTCCTTGTCC 41770 || | ||||| ||| Sbjct 457677 AATTCCTTCCTTATCC 457692 >seq5 Length=849029 Score = 113 bits (124), Expect = 4e-20 Identities = 136/183 (74%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| |||||||| || || || | || |||||||||||||| ||||| | Sbjct 477692 CCTTCTGGATGTTGTAGTCGGAAAGTGTCCGTCCATCCTCGAGCTGCTTGCCAGCGAAGA 477751 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGA 41790 | | ||||| || |||| ||||| | |||||| ||| ||| || ||| || | Sbjct 477752 TTAAACGCTGCTGATCCGGGGGAATTCCCTCCTTATCCTGGATCTTCGACTTGACATTGT 477811 Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 || | |||||||| ||||| ||||| | || || || || |||||||| ||||| || Sbjct 477812 CG--ATTGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGAC 477869 Query 41851 GAA 41853 ||| Sbjct 477870 GAA 477872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303023382800