Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Symbiotaphrina_20buchneri_20[genbank_20GCA_5F001599915.1_202016-03-
01] 169 sequences; 23,712,134 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq15 138 1e-27
seq5 113 4e-20
>seq15
Length=722239
Score = 138 bits (152), Expect = 1e-27
Identities = 171/229 (75%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | ||| || || || || || ||||| ||||| ||||||||
Sbjct 457039 CCACCACGGAGACGGAGCACGAGGTGAAGGGTTGATTCTTTCTGGATGTTGTAGTCGGAC 457098
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| | || || ||||||||||| ||||| || || ||||| ||||| | ||
Sbjct 457099 AGGGTGCGGCCATCTTCTAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGCGGG 457158
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| || ||||||||| ||| | || | |||| || | | | ||||| |||||||
Sbjct 457159 ATGCCTTCCTTGTCC-TGAATCTTCGACTTC-ACATTGTCGATGGTGTCTGAAGACTCCA 457216
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||||| || ||||| ||||||||||| ||||| ||||| ||||||||
Sbjct 457217 CCTCCAAAGTGATCGTCTTACCCGTCAGGGTCTTAACGAAGATCTGCAT 457265
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | ||||| ||||| || ||||||||||| ||||| ||||| ||
Sbjct 456583 CCACCACGGAGACGCAGCACCAAGTGCAGGGTACTCTCCTTCTGGATGTTGTAGTCTGAA 456642
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || | || || |||||||| || ||||| |||| ||||| ||||| | ||
Sbjct 456643 AGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCTGGAGGG 456702
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | |||||| | | ||| | |||| || ||| | | | || || || || ||
Sbjct 456703 ATACCCTCCTTAT-CTTGAATCTTTGATTTGACGTTGTCAATCGTATCAGAAGATTCGAC 456761
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||| | || |||||||| || ||||| ||||| ||||| ||||||||
Sbjct 456762 CTCGAGGGTAATCGTTTTCCCAGTCAGAGTCTTGACGAAGATCTGCAT 456809
Score = 105 bits (116), Expect = 6e-18
Identities = 158/219 (72%), Gaps = 4/219 (2%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | ||||||||| || || || ||||| ||||| ||||||||
Sbjct 457267 CCACCACGGAGACGGAGCACCAGATGGAGGGTTGATTCTTTCTGGATGTTGTAGTCGGAC 457326
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| | || ||||| || ||||||||||| |||| || || ||||| | ||
Sbjct 457327 AGGGTGCGGCCATCTTCGAGTTGTTTGCCGGCGAAGATCAAACGTTGCTGGTCGGGAGGG 457386
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| | ||||||| | ||| | |||| |||| || | | | ||||| |||||| |
Sbjct 457387 ATTCCTTCCTTGT-CTTGAATCTTTGACTTC-ACATTGTCGATCGTGTCTGACGACTCGA 457444
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852
|||||| || || || || || || || ||||| ||||
Sbjct 457445 CCTCCAAGGTGATGGTCTTGCCAGTGAGAGTCTTGACGA 457483
Score = 89.7 bits (98), Expect = 5e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||| |||| |||||||||||||||||||| ||||||
Sbjct 456811 CCACCACGCAGACGAAGGACCAAGTGCAAAGTGCTCTCCTTCTGAATGTTGTAGTCGCTC 456870
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| || || | || || ||||| || || ||||| |||| ||||| ||||| | ||
Sbjct 456871 AATGTACGGCCATCCTCCAGCTGTTTACCAGCGAAGATCAACCGCTGCTGGTCTGGTGGG 456930
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | |||||||| | || | || | || || | | | || ||| || || ||
Sbjct 456931 ATACCCTCCTTGT-CTTGGATCTTGGATTTGACATTGTCGATGGTATCGGAGGATTCAAC 456989
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| | || ||||| || || ||||| ||||| ||||| || |||||
Sbjct 456990 TTCTAGTGTGATCGTCTTGCCGGTCAGAGTCTTGACGAAGATTTGCAT 457037
Score = 87.8 bits (96), Expect = 2e-12
Identities = 101/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| | || || || || ||| || ||||| ||||| || |||||
Sbjct 457557 GCCTCCACGCAGACGAAGGACAAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCGGA 457616
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
||| || || |||| || ||||||||||| ||||| |||| |||||| ||||| | ||
Sbjct 457617 GAGCGTCCGGCCGTCTTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGAGG 457676
Query 41755 AACGCTCTCCTTGTCC 41770
|| | ||||| |||
Sbjct 457677 AATTCCTTCCTTATCC 457692
>seq5
Length=849029
Score = 113 bits (124), Expect = 4e-20
Identities = 136/183 (74%), Gaps = 4/183 (2%)
Strand=Plus/Plus
Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732
||||||| ||||| |||||||| || || || | || |||||||||||||| ||||| |
Sbjct 477692 CCTTCTGGATGTTGTAGTCGGAAAGTGTCCGTCCATCCTCGAGCTGCTTGCCAGCGAAGA 477751
Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGA 41790
| | ||||| || |||| ||||| | |||||| ||| ||| || ||| || |
Sbjct 477752 TTAAACGCTGCTGATCCGGGGGAATTCCCTCCTTATCCTGGATCTTCGACTTGACATTGT 477811
Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850
|| | |||||||| ||||| ||||| | || || || || |||||||| ||||| ||
Sbjct 477812 CG--ATTGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGAC 477869
Query 41851 GAA 41853
|||
Sbjct 477870 GAA 477872
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303023382800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |