Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20amestolkiae_20[genbank_20GCA_5F001896365.1_202016-12- 09] 212 sequences; 33,721,883 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq170 143 3e-29 seq136 129 6e-25 seq111 105 7e-18 seq1 104 2e-17 >seq170 Length=1587042 Score = 143 bits (158), Expect = 3e-29 Identities = 203/285 (71%), Gaps = 3/285 (1%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| |||||||| || || |||||||||| ||| ||| | || || Sbjct 1429715 ATCTGGCAAATGTACAAGAAGGCCGAAGCCTCCTTCTGGACCGCCGAAGAGATCGATCTC 1429656 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 || || || | ||||||| | ||| |||||||| | ||||| | || || | Sbjct 1429655 TCGAAAGATTTGCACGACTGGAACAACCGCCTGAACGACGATGAGCGTTACTTTATTTCG 1429596 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 || || || || || || || ||| || ||||| ||||| ||||| |||| ||||| Sbjct 1429595 CATGTCCTTGCATTCTTTGCTGCCTCTGATGGCATTGTCAATGAGAACTTGGTTGAGCGA 1429536 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | || || ||| | | || || || ||||||||||| || |||||| ||| Sbjct 1429535 TTCAGTGGTGAAGTTCAGATCCCTGAAGCTCGATGCTTCTACGGTTTCCAGATCATGATG 1429476 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 |||||| | ||||| |||| || || |||||| ||||| ||| Sbjct 1429475 GAGAACATTCACTCCGAAACATACTCTCTCCTCATTGACACCTAC 1429431 >seq136 Length=310984 Score = 129 bits (142), Expect = 6e-25 Identities = 137/181 (76%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || ||||||||||| ||||||||| |||| ||||| || |||||| | | Sbjct 29796 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACCATC 29737 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || || | ||||| ||||| |||||| | |||||||| || || Sbjct 29736 GACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCTG 29677 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| || || || ||||| || || | ||||| ||| ||||||||||||||||||| Sbjct 29676 ATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGCACTCTCTCCGACTACAACATCCAGAAG 29617 Query 40879 G 40879 | Sbjct 29616 G 29616 >seq111 Length=2402707 Score = 105 bits (116), Expect = 7e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||||||||||||| | || ||||| || | Sbjct 1716303 ATGCAGATTTTCGTCAAGACTCTTACCGGCAAAACCATCACCCTTGAGGTCGAGTCCTCT 1716362 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| | ||| || |||| ||||| || || || || | ||||| Sbjct 1716363 GATACCATCGACAACGTT-AAGTCGAAGATTCAGGACAAGGAAGGTATTCCTCCTGACCA 1716421 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| || ||||| || || || |||| || |||||| ||| || || Sbjct 1716422 GCAGCGCCTGATCTTTGCTGGCAAGCAACTCGAGGACGGCCGTACCCTCTCCGATTATAA 1716481 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||| || |||| || || || || Sbjct 1716482 CATCCAGAAAGAATCCACTCTTCACCTTGT 1716511 Score = 105 bits (116), Expect = 7e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| || || || ||||| | || |||||| || | Sbjct 1716531 ATGCAGATCTTCGTCAAGACTCTCACTGGAAAGACGATCACATTGGAAGTCGAATCCTCA 1716590 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | || ||||||| |||||||| || || || | ||||| Sbjct 1716591 GACACCATCGATAACG-TGAAATCCAAAATTCAAGACAAAGAAGGTATTCCTCCCGACCA 1716649 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||| | || | ||| || || || || || || | ||||| ||| ||||||||| Sbjct 1716650 GCAGCGATTGATTTTCGCTGGTAAGCAACTTGAAGATGGCCGCACACTCTCCGACTACAA 1716709 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||| || |||| || || || || Sbjct 1716710 CATCCAGAAAGAATCCACTCTACACCTTGT 1716739 Score = 96.9 bits (106), Expect = 4e-15 Identities = 135/187 (72%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| || || ||||||||| | || || || | | Sbjct 1716016 ATGCAGATCTTCGTCAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAGTCTTCG 1716075 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| ||||| || |||| ||||| ||||| || || | ||||| Sbjct 1716076 GATACCATCGACAACG-TCAAGTCCAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCA 1716134 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | |||| || ||||| ||||| || |||| ||||||||| |||||||| Sbjct 1716135 GCAGCGTTTGATCTTTGCTGGCAAGCAGCTCGAGGACGGTCGCACCCTCTCTGACTACAA 1716194 Query 40869 CATCCAG 40875 ||| ||| Sbjct 1716195 CATTCAG 1716201 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || ||||| |||||||| | || || ||| | || Sbjct 1716759 ATGCAGATTTTCGTCAAGACCTTGACCGGCAAGACCATCACATTAGAAGTTGAATCATCC 1716818 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||| || || | || || ||||||||||| | |||||| Sbjct 1716819 GACACAATTGACAATGTGAAGAGCAAGATCCAAGATAAGGAGGGCATCCCACCTGACCAG 1716878 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || ||| | || | ||| || || || ||||| || | ||||| || || |||||| Sbjct 1716879 CAGCGATTGATTTTCGCTGGTAAGCAACTGGAAGATGGACGCACTCTTTCTGATTACAAC 1716938 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905 |||||||||||| | || || || | ||| | ||| Sbjct 1716939 ATCCAGAAGGAGTCTACTCTTCACTTGGTGCTTCGC 1716974 >seq1 Length=3931711 Score = 104 bits (114), Expect = 2e-17 Identities = 89/110 (81%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| ||||| |||||| | |||||||| || | |||| ||| || || ||||| || Sbjct 1419543 GACAAGGAGGGTATCCCCCCCGACCAGCAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAA 1419484 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 |||| ||||||||| |||||||||||||||||||||| |||| || || Sbjct 1419483 GACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCCACCCTTCA 1419434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515217834669120