Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20amestolkiae_20[genbank_20GCA_5F001896365.1_202016-12- 09] 212 sequences; 33,721,883 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq111 116 3e-21 seq136 100 2e-16 seq1 89.7 4e-13 >seq111 Length=2402707 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || || ||||| || ||||| |||||| | || || |||||||| || || ||| Sbjct 1716499 GTGGATTCTTTCTGGATGTTATAATCGGAGAGGGTACGGCCGTCCTCGAGTTGCTTGCCA 1716440 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| || |||||||| || ||||| || || |||||||| ||| || ||| Sbjct 1716439 GCAAAGATCAGGCGCTGCTGGTCAGGAGGAATACCTTCCTTGTCCTGAATCTTCGACTTA 1716380 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| ||| || | | ||||||||| | ||| | ||||||||||| ||||| Sbjct 1716379 ACGTTGTCGATGGTATCAGAGGACTCGACCTCAAGGGTGATGGTTTTGCCGGTAAGAGTC 1716320 Query 118722 TTTACAAAAATCTGCAT 118738 || || ||||||||||| Sbjct 1716319 TTGACGAAAATCTGCAT 1716303 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | |||||||| || || ||||||||||| | |||||| ||| || Sbjct 1716968 CACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGTCCATCTTC 1716909 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 || || || |||||| | || | |||||||| || || || ||||||||||| ||| Sbjct 1716908 CAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGGGATGCCCTCCTTATCTTG 1716849 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTT 118707 || || || || | || | ||||| | || | || || || | || | || | Sbjct 1716848 GATCTTGCTCTTCACATTGTCAATTGTGTCGGATGAT-TCAACTTCTAATGTGATGGTCT 1716790 Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||||||| || || || ||||||||||| Sbjct 1716789 TGCCGGTCAAGGTCTTGACGAAAATCTGCAT 1716759 Score = 91.5 bits (100), Expect = 1e-13 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 118554 TGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGA 118613 ||||||||||| || | ||||| ||||||||||| || ||||| |||| | | Sbjct 1716200 TGAATGTTGTAGTCAGAGAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATCAAA 1716141 Query 118614 CGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACG 118673 |||||||| || ||||| || ||||||||||| ||| || || || | |||| | Sbjct 1716140 CGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATG 1716081 Query 118674 GTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATC 118733 || |||| ||| ||||| | ||| | || || || || || || || || || ||| Sbjct 1716080 GTATCCGAAGACTCCACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACGAAGATC 1716021 Query 118734 TGCAT 118738 ||||| Sbjct 1716020 TGCAT 1716016 >seq136 Length=310984 Score = 100 bits (110), Expect = 2e-16 Identities = 130/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || || |||||||| ||| | |||||| ||| || ||||| ||||| || |||| Sbjct 29618 TTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATC 29677 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670 ||||||||||| ||||| || || ||||||||||| || || || || | ||| Sbjct 29678 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG 29737 Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 118730 | |||||| | | ||||||||||| ||| | || ||||| || || || || || ||| Sbjct 29738 ATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAA 29797 >seq1 Length=3931711 Score = 89.7 bits (98), Expect = 4e-13 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || ||||| || || |||||||| ||| | ||||| || ||| Sbjct 1419428 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCG 1419487 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCT 118646 ||||| ||||| ||| |||| | ||||||||| ||||| || || |||||||||||| Sbjct 1419488 AGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCT 1419544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829279090704