Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20amestolkiae_20[genbank_20GCA_5F001896365.1_202016-12- 09] 212 sequences; 33,721,883 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq1 105 5e-18 seq111 102 6e-17 >seq1 Length=3931711 Score = 105 bits (116), Expect = 5e-18 Identities = 93/116 (80%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| ||||||||| |||||||||||| || ||| |||| || Sbjct 1419428 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCG 1419487 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243 || || ||||||||||| ||||| ||||| |||||||| || | |||||||||||| Sbjct 1419488 AGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCGGGGGGGATACCCTCCTTGTC 1419543 >seq111 Length=2402707 Score = 102 bits (112), Expect = 6e-17 Identities = 134/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 45151 CTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAA 45210 ||||||||||||||| || |||| |||| || || || || || || || ||||| Sbjct 1716201 CTGAATGTTGTAGTCAGAGAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATCAA 1716142 Query 45211 CCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCAC 45270 ||||| ||||| ||||| | ||||||||||||| ||| || ||| || | | Sbjct 1716141 ACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGAT 1716082 Query 45271 GCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGAT 45330 | | ||| | ||||||||| | ||| || ||||| || || || ||||| || ||||| Sbjct 1716081 GGTATCCGAAGACTCCACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACGAAGAT 1716022 Query 45331 TTGCAT 45336 ||||| Sbjct 1716021 CTGCAT 1716016 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| || ||||| |||||||||||| ||| ||| | || || ||||| Sbjct 1716734 GTGTAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGTTG 1716675 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || ||||| ||||| ||||| ||||||||||| | ||| || ||||| |||||| Sbjct 1716674 CTTACCAGCGAAAATCAATCGCTGCTGGTCGGGAGGAATACCTTCTTTGTCTTGAATTTT 1716615 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 || || | | | |||| || || |||| || |||||||| || || Sbjct 1716614 GGATTTCACGTTATCGATGGTGTCTGAGGATTCGACTTCCAATGTGATCGTCTTTCCAGT 1716555 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 |||||||| || ||||| ||||| Sbjct 1716554 GAGAGTCTTGACGAAGATCTGCAT 1716531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395074179224452