Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20amestolkiae_20[genbank_20GCA_5F001896365.1_202016-12- 09] 212 sequences; 33,721,883 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1 251 6e-62 seq170 147 2e-30 seq111 116 3e-21 seq136 89.7 5e-13 >seq1 Length=3931711 Score = 251 bits (278), Expect = 6e-62 Identities = 593/891 (67%), Gaps = 26/891 (3%) Strand=Plus/Minus Query 23102 ATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTAC 23161 || ||||| | ||| | ||||||||||| ||||| | ||||||||||||||| | Sbjct 122627 ATAGTGCCGAGATTCTTTTGGTTGCTTTTCTTGTTGCAAGCGTCCTTGTAGAGCATGAAA 122568 Query 23162 GGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACA 23221 || | || ||||| ||| | ||| | || || ||| | ||||||| | | | Sbjct 122567 GGGTTACCGGTCTCAGTCTGAGCCTCAAGAATGGCGTACCAGAGCTTCTGAGCTTTGATA 122508 Query 23222 ---CGTCG--CACGTACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGG 23276 || || |||| ||| ||| ||||||||||| ||| | || ||||| || Sbjct 122507 GTACGACGACCACGGCCCTCCCT-----CTCGTACTTTTCGTATAGAGCATCAAACTCTT 122453 Query 23277 CACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCAC-----AT 23331 | || || ||| || || || | | | | || || | | |||| || Sbjct 122452 CGCCATAGACGTCAGCAAGACCAGAAGCCTCATTAGGGCAAAACAAGGTCCAGTCCTGAT 122393 Query 23332 TGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTC 23391 || | | || || || | ||| || ||||| || |||| | || ||||||| || Sbjct 122392 TG-GCC----TCTACACGACGCATGAAGAGATCAGGGGTCCACAAGGCATAGAACAAATC 122338 Query 23392 GCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTC 23451 ||||| || || ||||||||||| |||||| | || | || || || || || Sbjct 122337 ACGGGCACGGACTTCCTCTTTGCCATGGTTCTTGCGGAGGTCAAGGAACTCGAAGACATC 122278 Query 23452 CGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATC 23511 || ||||| ||||||||||| | ||||| || || || | || || ||||| || || Sbjct 122277 CGAGTGCCATGGCTCGAGGTAGATAGCAAAAGCACCAGGACGTTTGTTACCGCCTTGGTC 122218 Query 23512 GACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCC 23571 || || | ||| ||||||||| | ||||| ||||| ||||| |||||||| || | || Sbjct 122217 AACATACCTGGCAGTGTTGTTGAATACTCTGAGCATAGGCACAAGACCGTTTGAAGTACC 122158 Query 23572 GCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCC 23631 | || | | ||||| | | || | | ||| || | || || || || Sbjct 122157 GTTGGTTCCTCCGATGTAGGAACCAGTGGAACGGATGCGGTGCACATTGAGGCCAATACC 122098 Query 23632 TCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCT 23691 ||| | || || || ||||| || ||| || ||||| || ||||||||||| || || Sbjct 122097 ACCGGCAGACTTAGAAATCATAGCACATGTCTTGAGAGTATCATAGATGCCCTCAATACT 122038 Query 23692 GTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGA 23751 |||||| || | | || | ||| || |||| | ||| | | ||| ||| | || Sbjct 122037 GTCCTCCTTCATGTCCACAAGGAAGCAAGAAGCGAGTTGTGGTCGGGGAGTACCCGCATT 121978 Query 23752 GAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGAT 23811 ||||| ||| || ||| || || ||||| | ||||||| ||||| || || || Sbjct 121977 GAACAATGTTGGAGAGGCATGTGTGAAGTACTTCTGAGACATTAAGTTGTATGTCTCAAT 121918 Query 23812 GGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGG 23871 || ||||| | ||| ||||| ||||||| || || ||||| ||||||| |||||| Sbjct 121917 AGCTTTTTCAATATTCTCACCGTGAATACCGACAGCAACACGCATGATCATGTGTTGAGG 121858 Query 23872 TCTCTCG---ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAA 23928 | ||| ||| || || || ||| ||| ||||| || |||| | || || || Sbjct 121857 GCGTTCGGCAACCTTG---CCATTTATTCTGAGAAGATAAGAGCGTTCGAGGGTCTTGAA 121801 Query 23929 TCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAA 23979 || || || | ||||||||||||||| || | || |||||||||||||| Sbjct 121800 ACCGAAGTATTGATAGTTAAAGTCACGGTCATAAACAATGGCCGAATTCAA 121750 >seq170 Length=1587042 Score = 147 bits (162), Expect = 2e-30 Identities = 326/478 (68%), Gaps = 22/478 (5%) Strand=Plus/Minus Query 57979 TCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGA 58038 |||| ||||| |||||||||||||| ||||| || ||| ||||| | || || ||| Sbjct 1429250 TCGCATTCGCTGCCGTCGAAGGTATTTTCTTCTCTGGCTCTTTTGCCTCTATCTTCTGGT 1429191 Query 58039 TGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACG 58098 ||||||| || || ||||||| || |||| || |||||| | || || || |||| Sbjct 1429190 TGAAGAAGCGTGGTTTGATGCCTGGTTTGACCTTCTCCAACGAACTCATCTCTCGTGACG 1429131 Query 58099 AGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGC 58158 |||| || || || || ||||| ||| | | | ||| ||| |||| ||||| | | Sbjct 1429130 AGGGCCTTCACACCGACTTTGCATGCTTGCTCTTCTCCCAC---CTCAA-CAACCGTCCC 1429075 Query 58159 GGGATCGCA---TC-TTG--GACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTG 58212 | | || || ||| ||||| || ||| || || || |||||| | ||||| Sbjct 1429074 AG--CCCCAAGGTCGTTGAAGACATCATTGTCGATGCCGTTGCCATCGAACAAGAGTTCT 1429017 Query 58213 TCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACA 58272 | ||||| ||||| || || ||||||| |||||| | ||||||| |||||| Sbjct 1429016 TGACCGATGCCCTTCCTTGCGCTTTGCTCGGAATGAACTCGAAATTGATGTGCCAGTACA 1428957 Query 58273 TTGAGTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGG-----AGAGCGTCATTACAA 58327 ||||||| ||||||||| | || ||| ||| || |||| ||| || | ||||| Sbjct 1428956 TTGAGTTCGTTGCCGACCGTCTCTTGGTCG--CT-CTTGGCAACAAGA-AGT-ACTACAA 1428902 Query 58328 CACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTT 58387 | | || || || || || ||| | ||||| || | |||||||| ||||| || Sbjct 1428901 TGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGCCGGCAAGACTAACTTCTT 1428842 Query 58388 CGaaaaaaaaGTTAGCGAATATCAAAAATACGGCGTGATGAGCGGTAACAAGTTGGAG 58445 ||| || ||| | || || || || ||| || |||| | | | |||| |||| Sbjct 1428841 CGAGAAGCGTGTTGGTGACTACCAGAAGGCCGGTGTCATGAACAGCACCAAGAAGGAG 1428784 >seq111 Length=2402707 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| |||||||| || |||||||| |||||| | || || || | || Sbjct 1716303 ATGCAGATTTTCGTCAAGACTCTTACCGGCAAAACCATCACCCTTGAGGTCGAGTCCTCT 1716362 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | || || || || |||||||||||| | || || |||||| Sbjct 1716363 GATACCATCGACAACGTTAAGTCGAAGATTCAGGACAAGGAAGGTATTCCTCCTGACCAG 1716422 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || || |||||||| || | || ||| || | |||||||||| Sbjct 1716423 CAGCGCCTGATCTTTGCTGGCAAGCAACTCGAGGACGGCCGTACCCTCTCCGATTATAAC 1716482 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || |||||||| |||||||| || || ||| | || | || |||| Sbjct 1716483 ATCCAGAAAGAATCCACTCTTCACCTTGTCCTTCGTCTCCGTGGTGGTA 1716531 Score = 93.3 bits (102), Expect = 4e-14 Identities = 154/217 (71%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| |||| ||||| || ||||| | || |||||| | ||| Sbjct 1716759 ATGCAGATTTTCGTCAAGACCTTGACCGGCAAGACCATCACATTAGAAGTTGAATCATCC 1716818 Query 31253 GACAGTGTCGAAACGGTCAAACAGAG-AATAGCG--GACAAGGAAGGCGTGCCGCCCGAC 31309 |||| | || | || || ||| || | | || ||||| ||| | || || ||| Sbjct 1716819 GACACAATTGACAATGTGAA---GAGCAAGATCCAAGATAAGGAGGGCATCCCACCTGAC 1716875 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTA 31368 |||||||| | || |||||||| || || ||||||| | | | ||| | ||||| Sbjct 1716876 CAGCAGCGATTGATTTTCGCTGGTAAGCAACTGGAAGA-TGGACGCACTCTTTCTGATTA 1716934 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||||| || || || || |||||||| |||| ||| Sbjct 1716935 CAACATCCAGAAGGAGTCTACTCTTCACTTGGTGCTT 1716971 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||||| || || || |||||||| | || || ||| | || Sbjct 1716531 ATGCAGATCTTCGTCAAGACTCTCACTGGAAAGACGATCACATTGGAAGTCGAATCCTCA 1716590 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || ||| | ||| ||||| ||||| | || ||||||||| Sbjct 1716591 GACACCATCGATAACGTGAAATCCAAAATTCAAGACAAAGAAGGTATTCCTCCCGACCAG 1716650 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| | || |||||||| || || | ||||| || | ||| || ||| Sbjct 1716651 CAGCGATTGATTTTCGCTGGTAAGCAACTTGAAGATGGCCGCACACTCTCCGACTACAAC 1716710 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || |||||||| ||||| || || || || Sbjct 1716711 ATCCAGAAAGAATCCACTCTACACCTTGTCCT 1716742 >seq136 Length=310984 Score = 89.7 bits (98), Expect = 5e-13 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260 |||||| ||||| || || ||||| || |||||| |||| || || | ||||||| | Sbjct 29797 TTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACCAT 29738 Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320 ||| | ||||| || || ||||||||| || | || ||||||||||||||||| Sbjct 29737 CGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCT 29678 Query 31321 AATATTCGCTGGCAAACAGTTGGAAGA 31347 || || || || || ||| | ||||| Sbjct 29677 GATCTTTGCCGGAAAGCAGCTTGAAGA 29651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765218719040