Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20amestolkiae_20[genbank_20GCA_5F001896365.1_202016-12-
09] 212 sequences; 33,721,883 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq1 251 6e-62
seq170 147 2e-30
seq111 116 3e-21
seq136 89.7 5e-13
>seq1
Length=3931711
Score = 251 bits (278), Expect = 6e-62
Identities = 593/891 (67%), Gaps = 26/891 (3%)
Strand=Plus/Minus
Query 23102 ATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTAC 23161
|| ||||| | ||| | ||||||||||| ||||| | ||||||||||||||| |
Sbjct 122627 ATAGTGCCGAGATTCTTTTGGTTGCTTTTCTTGTTGCAAGCGTCCTTGTAGAGCATGAAA 122568
Query 23162 GGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACA 23221
|| | || ||||| ||| | ||| | || || ||| | ||||||| | | |
Sbjct 122567 GGGTTACCGGTCTCAGTCTGAGCCTCAAGAATGGCGTACCAGAGCTTCTGAGCTTTGATA 122508
Query 23222 ---CGTCG--CACGTACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGG 23276
|| || |||| ||| ||| ||||||||||| ||| | || ||||| ||
Sbjct 122507 GTACGACGACCACGGCCCTCCCT-----CTCGTACTTTTCGTATAGAGCATCAAACTCTT 122453
Query 23277 CACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCAC-----AT 23331
| || || ||| || || || | | | | || || | | |||| ||
Sbjct 122452 CGCCATAGACGTCAGCAAGACCAGAAGCCTCATTAGGGCAAAACAAGGTCCAGTCCTGAT 122393
Query 23332 TGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTC 23391
|| | | || || || | ||| || ||||| || |||| | || ||||||| ||
Sbjct 122392 TG-GCC----TCTACACGACGCATGAAGAGATCAGGGGTCCACAAGGCATAGAACAAATC 122338
Query 23392 GCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTC 23451
||||| || || ||||||||||| |||||| | || | || || || || ||
Sbjct 122337 ACGGGCACGGACTTCCTCTTTGCCATGGTTCTTGCGGAGGTCAAGGAACTCGAAGACATC 122278
Query 23452 CGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATC 23511
|| ||||| ||||||||||| | ||||| || || || | || || ||||| || ||
Sbjct 122277 CGAGTGCCATGGCTCGAGGTAGATAGCAAAAGCACCAGGACGTTTGTTACCGCCTTGGTC 122218
Query 23512 GACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCC 23571
|| || | ||| ||||||||| | ||||| ||||| ||||| |||||||| || | ||
Sbjct 122217 AACATACCTGGCAGTGTTGTTGAATACTCTGAGCATAGGCACAAGACCGTTTGAAGTACC 122158
Query 23572 GCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCC 23631
| || | | ||||| | | || | | ||| || | || || || ||
Sbjct 122157 GTTGGTTCCTCCGATGTAGGAACCAGTGGAACGGATGCGGTGCACATTGAGGCCAATACC 122098
Query 23632 TCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCT 23691
||| | || || || ||||| || ||| || ||||| || ||||||||||| || ||
Sbjct 122097 ACCGGCAGACTTAGAAATCATAGCACATGTCTTGAGAGTATCATAGATGCCCTCAATACT 122038
Query 23692 GTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGA 23751
|||||| || | | || | ||| || |||| | ||| | | ||| ||| | ||
Sbjct 122037 GTCCTCCTTCATGTCCACAAGGAAGCAAGAAGCGAGTTGTGGTCGGGGAGTACCCGCATT 121978
Query 23752 GAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGAT 23811
||||| ||| || ||| || || ||||| | ||||||| ||||| || || ||
Sbjct 121977 GAACAATGTTGGAGAGGCATGTGTGAAGTACTTCTGAGACATTAAGTTGTATGTCTCAAT 121918
Query 23812 GGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGG 23871
|| ||||| | ||| ||||| ||||||| || || ||||| ||||||| ||||||
Sbjct 121917 AGCTTTTTCAATATTCTCACCGTGAATACCGACAGCAACACGCATGATCATGTGTTGAGG 121858
Query 23872 TCTCTCG---ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAA 23928
| ||| ||| || || || ||| ||| ||||| || |||| | || || ||
Sbjct 121857 GCGTTCGGCAACCTTG---CCATTTATTCTGAGAAGATAAGAGCGTTCGAGGGTCTTGAA 121801
Query 23929 TCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAA 23979
|| || || | ||||||||||||||| || | || ||||||||||||||
Sbjct 121800 ACCGAAGTATTGATAGTTAAAGTCACGGTCATAAACAATGGCCGAATTCAA 121750
>seq170
Length=1587042
Score = 147 bits (162), Expect = 2e-30
Identities = 326/478 (68%), Gaps = 22/478 (5%)
Strand=Plus/Minus
Query 57979 TCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGA 58038
|||| ||||| |||||||||||||| ||||| || ||| ||||| | || || |||
Sbjct 1429250 TCGCATTCGCTGCCGTCGAAGGTATTTTCTTCTCTGGCTCTTTTGCCTCTATCTTCTGGT 1429191
Query 58039 TGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACG 58098
||||||| || || ||||||| || |||| || |||||| | || || || ||||
Sbjct 1429190 TGAAGAAGCGTGGTTTGATGCCTGGTTTGACCTTCTCCAACGAACTCATCTCTCGTGACG 1429131
Query 58099 AGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGC 58158
|||| || || || || ||||| ||| | | | ||| ||| |||| ||||| | |
Sbjct 1429130 AGGGCCTTCACACCGACTTTGCATGCTTGCTCTTCTCCCAC---CTCAA-CAACCGTCCC 1429075
Query 58159 GGGATCGCA---TC-TTG--GACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTG 58212
| | || || ||| ||||| || ||| || || || |||||| | |||||
Sbjct 1429074 AG--CCCCAAGGTCGTTGAAGACATCATTGTCGATGCCGTTGCCATCGAACAAGAGTTCT 1429017
Query 58213 TCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACA 58272
| ||||| ||||| || || ||||||| |||||| | ||||||| ||||||
Sbjct 1429016 TGACCGATGCCCTTCCTTGCGCTTTGCTCGGAATGAACTCGAAATTGATGTGCCAGTACA 1428957
Query 58273 TTGAGTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGG-----AGAGCGTCATTACAA 58327
||||||| ||||||||| | || ||| ||| || |||| ||| || | |||||
Sbjct 1428956 TTGAGTTCGTTGCCGACCGTCTCTTGGTCG--CT-CTTGGCAACAAGA-AGT-ACTACAA 1428902
Query 58328 CACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTT 58387
| | || || || || || ||| | ||||| || | |||||||| ||||| ||
Sbjct 1428901 TGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGCCGGCAAGACTAACTTCTT 1428842
Query 58388 CGaaaaaaaaGTTAGCGAATATCAAAAATACGGCGTGATGAGCGGTAACAAGTTGGAG 58445
||| || ||| | || || || || ||| || |||| | | | |||| ||||
Sbjct 1428841 CGAGAAGCGTGTTGGTGACTACCAGAAGGCCGGTGTCATGAACAGCACCAAGAAGGAG 1428784
>seq111
Length=2402707
Score = 116 bits (128), Expect = 3e-21
Identities = 163/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||||| |||||||| || |||||||| |||||| | || || || | ||
Sbjct 1716303 ATGCAGATTTTCGTCAAGACTCTTACCGGCAAAACCATCACCCTTGAGGTCGAGTCCTCT 1716362
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | |||| | || || || || |||||||||||| | || || ||||||
Sbjct 1716363 GATACCATCGACAACGTTAAGTCGAAGATTCAGGACAAGGAAGGTATTCCTCCTGACCAG 1716422
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| || || || |||||||| || | || ||| || | ||||||||||
Sbjct 1716423 CAGCGCCTGATCTTTGCTGGCAAGCAACTCGAGGACGGCCGTACCCTCTCCGATTATAAC 1716482
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| || |||||||| |||||||| || || ||| | || | || ||||
Sbjct 1716483 ATCCAGAAAGAATCCACTCTTCACCTTGTCCTTCGTCTCCGTGGTGGTA 1716531
Score = 93.3 bits (102), Expect = 4e-14
Identities = 154/217 (71%), Gaps = 8/217 (4%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||||| ||||| |||| ||||| || ||||| | || |||||| | |||
Sbjct 1716759 ATGCAGATTTTCGTCAAGACCTTGACCGGCAAGACCATCACATTAGAAGTTGAATCATCC 1716818
Query 31253 GACAGTGTCGAAACGGTCAAACAGAG-AATAGCG--GACAAGGAAGGCGTGCCGCCCGAC 31309
|||| | || | || || ||| || | | || ||||| ||| | || || |||
Sbjct 1716819 GACACAATTGACAATGTGAA---GAGCAAGATCCAAGATAAGGAGGGCATCCCACCTGAC 1716875
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTA 31368
|||||||| | || |||||||| || || ||||||| | | | ||| | |||||
Sbjct 1716876 CAGCAGCGATTGATTTTCGCTGGTAAGCAACTGGAAGA-TGGACGCACTCTTTCTGATTA 1716934
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405
||||| || || || || |||||||| |||| |||
Sbjct 1716935 CAACATCCAGAAGGAGTCTACTCTTCACTTGGTGCTT 1716971
Score = 89.7 bits (98), Expect = 5e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| |||||||| || || || |||||||| | || || ||| | ||
Sbjct 1716531 ATGCAGATCTTCGTCAAGACTCTCACTGGAAAGACGATCACATTGGAAGTCGAATCCTCA 1716590
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | || ||| | ||| ||||| ||||| | || |||||||||
Sbjct 1716591 GACACCATCGATAACGTGAAATCCAAAATTCAAGACAAAGAAGGTATTCCTCCCGACCAG 1716650
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| | || |||||||| || || | ||||| || | ||| || |||
Sbjct 1716651 CAGCGATTGATTTTCGCTGGTAAGCAACTTGAAGATGGCCGCACACTCTCCGACTACAAC 1716710
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|| || |||||||| ||||| || || || ||
Sbjct 1716711 ATCCAGAAAGAATCCACTCTACACCTTGTCCT 1716742
>seq136
Length=310984
Score = 89.7 bits (98), Expect = 5e-13
Identities = 108/147 (73%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260
|||||| ||||| || || ||||| || |||||| |||| || || | ||||||| |
Sbjct 29797 TTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACCAT 29738
Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320
||| | ||||| || || ||||||||| || | || |||||||||||||||||
Sbjct 29737 CGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCT 29678
Query 31321 AATATTCGCTGGCAAACAGTTGGAAGA 31347
|| || || || || ||| | |||||
Sbjct 29677 GATCTTTGCCGGAAAGCAGCTTGAAGA 29651
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445765218719040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |