Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20amestolkiae_20[genbank_20GCA_5F001896365.1_202016-12- 09] 212 sequences; 33,721,883 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq170 118 2e-21 seq1 105 1e-17 seq137 96.9 7e-15 >seq170 Length=1587042 Score = 118 bits (130), Expect = 2e-21 Identities = 285/429 (66%), Gaps = 17/429 (4%) Strand=Plus/Minus Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975 |||| || || ||||| || ||||| || ||||| ||| | || || || || |||| Sbjct 1429253 TTGTCGCATTCGCTGCCGTCGAAGGTATTTTCTTCTCTGGCTCTTTTGCCTCTATCTTCT 1429194 Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGG 102035 || | ||||| | ||| | |||||||| | |||| |||||| || |||| ||| | | Sbjct 1429193 GGTTGAAGAAGCGTGGTTTGATGCCTGGTTTGACCTTCTCCAACGAACTCATCTCTCGTG 1429134 Query 102036 ACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCC 102095 |||| || ||||| ||||||||||||| |||| || | | | | || Sbjct 1429133 ACGAGGGCCTTCACACCGACTTTGCATGCTTGCTCTTCTCCCA------CCTCAACAACC 1429080 Query 102096 CATCAAGAGAAAGGATTCTTGAA------ATTGTCACTGAAGCCGTCCGAATTGAACAAG 102149 | || | | | ||||| |||||| || ||||| || ||||||| Sbjct 1429079 GTCCCAGCCCCAAGGTCGTTGAAGACATCATTGTC---GATGCCGTTGCCATCGAACAAG 1429023 Query 102150 AATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCC 102209 | || | || | | |||| ||| || | |||||||||| || |||||| ||| Sbjct 1429022 AGTTCTTGACCGATGCCCTTCCTTGCGCTTTGCTCGGAATGAACTCGAAATTGATGTGCC 1428963 Query 102210 AGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAA-AAGCACTAT 102268 |||||||||| || || || || || ||||| | | || | | || ||| |||| Sbjct 1428962 AGTACATTGAGTTCGTTGCCGACCGTCTCTTGGTCGCTCTTGG-CAACAAGAAGTACTAC 1428904 Query 102269 AATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTT 102328 |||| |||||||||||| |||||||| || || ||||| | ||||| ||||| Sbjct 1428903 AATGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGCCGGCAAGACTAACTTC 1428844 Query 102329 TTTGAAAAG 102337 || || ||| Sbjct 1428843 TTCGAGAAG 1428835 >seq1 Length=3931711 Score = 105 bits (116), Expect = 1e-17 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 94824 CTTAAGAGTATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGA 94883 ||| ||||||||||| || |||||||| || || || | | | ||| ||||||||| || Sbjct 122067 CTTGAGAGTATCATAGATGCCCTCAATACTGTCCTCCTTCATGTCCACAAGGAAGCAAGA 122008 Query 94884 GGAAAGTTGGGGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATA 94943 | ||||| ||| | || || ||| |||| ||| || || ||||| || || || Sbjct 122007 AGCGAGTTGTGGTCGGGGAGTACCCGCATTGAACAATGTTGGAGAGGCATGTGTGAAGTA 121948 Query 94944 GTGCCTCGACATGAGATCATATGTTTCAATGACAGATTTGAT-GTCTGATCCGTGAATGC 95002 | | ||||| | | ||||| ||||| | || || ||| | |||||||| | Sbjct 121947 CTTCTGAGACATTAAGTTGTATGTCTCAATAGCTTTTTCAATATTCTCA-CCGTGAATAC 121889 Query 95003 CGACAGCCACACGCATAATCATGTCCTGAGGGCGCTC 95039 ||||||| |||||||| ||||||| |||||||| || Sbjct 121888 CGACAGCAACACGCATGATCATGTGTTGAGGGCGTTC 121852 >seq137 Length=1718631 Score = 96.9 bits (106), Expect = 7e-15 Identities = 200/290 (69%), Gaps = 6/290 (2%) Strand=Plus/Minus Query 35333 ATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACG-ATAGAGC 35391 |||||| ||| |||||||| || ||||| | |||| | ||||| || | | | Sbjct 1270129 ATCTGGGACGGCAATGGGTCCCGTGAATTCCTCGACAATTT-GGGTTTGACTCACCGTGA 1270071 Query 35392 AGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGA 35451 || || || |||| ||||| ||||| ||||||||||| ||||| || || |||||| | Sbjct 1270070 AGTCGGCGACCTGGGCCCCGTTTACGGGTTCCAATGGCGCCATTTCGGCGCGGAATAT-A 1270012 Query 35452 TACCTG-TTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGA 35510 | || |||||||||| ||| |||| |||| || | ||| |||| || | | Sbjct 1270011 AAGATGCAAAAGCCGATTATACAGGAGAGGGCGTTGACCAGATTGCCGATATTATACACA 1269952 Query 35511 CCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATC 35570 || | ||||| | ||| | |||||||| | ||||| |||||||| | ||| | Sbjct 1269951 AATTGCGCACTAATCCCTACGATCGTCGGATGATTCTTACGGCGTGGAATCCGAAGGA-C 1269893 Query 35571 TTCACCTT-ATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGT 35619 || | || |||| || || || || || ||| ||| || |||||||| Sbjct 1269892 TTGAAGTTGATGGTCCTGCCGCCTTGTCATATGTTTGCGCAGTTTTATGT 1269843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989581312042460