Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20amestolkiae_20[genbank_20GCA_5F001896365.1_202016-12-
09] 212 sequences; 33,721,883 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq170 118 2e-21
seq1 105 1e-17
seq137 96.9 7e-15
>seq170
Length=1587042
Score = 118 bits (130), Expect = 2e-21
Identities = 285/429 (66%), Gaps = 17/429 (4%)
Strand=Plus/Minus
Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975
|||| || || ||||| || ||||| || ||||| ||| | || || || || ||||
Sbjct 1429253 TTGTCGCATTCGCTGCCGTCGAAGGTATTTTCTTCTCTGGCTCTTTTGCCTCTATCTTCT 1429194
Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGG 102035
|| | ||||| | ||| | |||||||| | |||| |||||| || |||| ||| | |
Sbjct 1429193 GGTTGAAGAAGCGTGGTTTGATGCCTGGTTTGACCTTCTCCAACGAACTCATCTCTCGTG 1429134
Query 102036 ACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCC 102095
|||| || ||||| ||||||||||||| |||| || | | | | ||
Sbjct 1429133 ACGAGGGCCTTCACACCGACTTTGCATGCTTGCTCTTCTCCCA------CCTCAACAACC 1429080
Query 102096 CATCAAGAGAAAGGATTCTTGAA------ATTGTCACTGAAGCCGTCCGAATTGAACAAG 102149
| || | | | ||||| |||||| || ||||| || |||||||
Sbjct 1429079 GTCCCAGCCCCAAGGTCGTTGAAGACATCATTGTC---GATGCCGTTGCCATCGAACAAG 1429023
Query 102150 AATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCC 102209
| || | || | | |||| ||| || | |||||||||| || |||||| |||
Sbjct 1429022 AGTTCTTGACCGATGCCCTTCCTTGCGCTTTGCTCGGAATGAACTCGAAATTGATGTGCC 1428963
Query 102210 AGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAA-AAGCACTAT 102268
|||||||||| || || || || || ||||| | | || | | || ||| ||||
Sbjct 1428962 AGTACATTGAGTTCGTTGCCGACCGTCTCTTGGTCGCTCTTGG-CAACAAGAAGTACTAC 1428904
Query 102269 AATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTT 102328
|||| |||||||||||| |||||||| || || ||||| | ||||| |||||
Sbjct 1428903 AATGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGCCGGCAAGACTAACTTC 1428844
Query 102329 TTTGAAAAG 102337
|| || |||
Sbjct 1428843 TTCGAGAAG 1428835
>seq1
Length=3931711
Score = 105 bits (116), Expect = 1e-17
Identities = 155/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 94824 CTTAAGAGTATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGA 94883
||| ||||||||||| || |||||||| || || || | | | ||| ||||||||| ||
Sbjct 122067 CTTGAGAGTATCATAGATGCCCTCAATACTGTCCTCCTTCATGTCCACAAGGAAGCAAGA 122008
Query 94884 GGAAAGTTGGGGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATA 94943
| ||||| ||| | || || ||| |||| ||| || || ||||| || || ||
Sbjct 122007 AGCGAGTTGTGGTCGGGGAGTACCCGCATTGAACAATGTTGGAGAGGCATGTGTGAAGTA 121948
Query 94944 GTGCCTCGACATGAGATCATATGTTTCAATGACAGATTTGAT-GTCTGATCCGTGAATGC 95002
| | ||||| | | ||||| ||||| | || || ||| | |||||||| |
Sbjct 121947 CTTCTGAGACATTAAGTTGTATGTCTCAATAGCTTTTTCAATATTCTCA-CCGTGAATAC 121889
Query 95003 CGACAGCCACACGCATAATCATGTCCTGAGGGCGCTC 95039
||||||| |||||||| ||||||| |||||||| ||
Sbjct 121888 CGACAGCAACACGCATGATCATGTGTTGAGGGCGTTC 121852
>seq137
Length=1718631
Score = 96.9 bits (106), Expect = 7e-15
Identities = 200/290 (69%), Gaps = 6/290 (2%)
Strand=Plus/Minus
Query 35333 ATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACG-ATAGAGC 35391
|||||| ||| |||||||| || ||||| | |||| | ||||| || | | |
Sbjct 1270129 ATCTGGGACGGCAATGGGTCCCGTGAATTCCTCGACAATTT-GGGTTTGACTCACCGTGA 1270071
Query 35392 AGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGA 35451
|| || || |||| ||||| ||||| ||||||||||| ||||| || || |||||| |
Sbjct 1270070 AGTCGGCGACCTGGGCCCCGTTTACGGGTTCCAATGGCGCCATTTCGGCGCGGAATAT-A 1270012
Query 35452 TACCTG-TTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGA 35510
| || |||||||||| ||| |||| |||| || | ||| |||| || | |
Sbjct 1270011 AAGATGCAAAAGCCGATTATACAGGAGAGGGCGTTGACCAGATTGCCGATATTATACACA 1269952
Query 35511 CCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATC 35570
|| | ||||| | ||| | |||||||| | ||||| |||||||| | ||| |
Sbjct 1269951 AATTGCGCACTAATCCCTACGATCGTCGGATGATTCTTACGGCGTGGAATCCGAAGGA-C 1269893
Query 35571 TTCACCTT-ATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGT 35619
|| | || |||| || || || || || ||| ||| || ||||||||
Sbjct 1269892 TTGAAGTTGATGGTCCTGCCGCCTTGTCATATGTTTGCGCAGTTTTATGT 1269843
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989581312042460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |