Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20amestolkiae_20[genbank_20GCA_5F001896365.1_202016-12- 09] 212 sequences; 33,721,883 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq1 181 1e-40 >seq1 Length=3931711 Score = 181 bits (200), Expect = 1e-40 Identities = 622/958 (65%), Gaps = 34/958 (4%) Strand=Plus/Minus Query 62958 TTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTA--- 63014 || || || || ||||||| || | | ||||| || ||||| |||||||| || Sbjct 122693 TTGCAGACAGCAACCTCATCAGGAGCACAATATTCAATAATCTCGGTGCAAAGGTTGGAG 122634 Query 63015 CTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAA 63074 |||| |||||| || | ||| | ||| || || || ||||| || || ||||| || Sbjct 122633 CTACG---GATAGTGCCGAGATTCTTTTGGTTGCTTTTCTTGTTGCAAGCGTCCTTGTAG 122577 Query 63075 AGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-G 63133 || ||||| || |||| || ||| |||||| || | ||| || | ||||| | || | Sbjct 122576 AGCATGAAAGGGTTACCGGTCTCAGTCTGAGCCTCAAGAATGGCGTACCAGA-GCTTCTG 122518 Query 63134 AGCCTTTATTATA-GATTTGTATCTCCTT---TCTC-----TTTCGTATAGAGTATACAA 63184 ||| || || || || | || | |||| |||||||||||| || Sbjct 122517 AGCTTTGATAGTACGACGACCACGGCCCTCCCTCTCGTACTTTTCGTATAGAGCAT---- 122462 Query 63185 TCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAA 63244 | ||||| || || | || | | | | || | |||| || || | ||| Sbjct 122461 -----CAAACTCTTCGCCATAGACGTCAGCAAGACCAGAAGCCTCATTAGGGCAAAACAA 122407 Query 63245 CGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTAT 63304 | ||| || | ||| || || ||| ||||||||||| |||| | || || Sbjct 122406 GGTCCAGTCCTGATTGGCCTCTACACGACGCATGAAGAGATCAGGGGTCCACAAGGC-AT 122348 Query 63305 A-AATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACG 63363 | || | ||| | | | |||||| || || ||||| || || |||||| Sbjct 122347 AGAACAAATCACGGGCACGGACTTCCTCTTTGCCATGGTTCTTGCGGAGGTCAAGGAACT 122288 Query 63364 CCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTC 63423 | | | ||| || ||||| || || | ||| || || | | | ||||| |||||||| | Sbjct 122287 CGAAGACATCCGAGTGCCATGGCTCGAGGTAGATAGCAAAAGCACCAGGACGTTTGTTAC 122228 Query 63424 CTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGT 63483 | || || || | || || || ||||| || | ||||| | ||| || | || ||||| Sbjct 122227 CGCCTTGGTCAACATACCTGGCAGTGTTGTTGAATACTCTGAGCATAGGCACAAGACCGT 122168 Query 63484 TTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATAT--TACTAATTGA 63541 |||| |||| ||||| || ||| ||| ||| ||| ||| || | | ||||| Sbjct 122167 TTGAAGTACCGTTGGTTCCTCCGATGTAGGAACCAGTGGAACGGATGCGGTGCACATTGA 122108 Query 63542 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGAT 63601 | || || || || || ||||| || | || ||| || | || |||||||| Sbjct 122107 --GGCCAATACCACCGGCAGACTTAGAAATCATAGCACATGTCTTGAGAGTATCATAGAT 122050 Query 63602 GCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGT 63661 ||| || || || || || |||||| | || || || || | ||| | || | Sbjct 122049 GCCCTCAATACTGTCCTCCTTCATGTCCACAAGGAAGCAAGAAGCGAGTTGTGGTCGGGG 121990 Query 63662 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 63721 ||| |||||||| || || || ||||| || || || || | || | ||| | || || Sbjct 121989 AGTACCCGCATTGAACAATGTTGGAGAGGCATGTGTGAAGTACTTCTGAGACATTAAGTT 121930 Query 63722 GTACGTCTCAATAGCTGAGTCTATA-TCCCATTGATGAATTCCTACTGCGACACGCATTA 63780 ||| |||||||||||| || ||| || || | ||||| || || || |||||||| | Sbjct 121929 GTATGTCTCAATAGCTTTTTCAATATTCTCACCG-TGAATACCGACAGCAACACGCATGA 121871 Query 63781 ACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCA 63840 |||||| ||||| | ||| ||| ||| |||||| | | | || || ||| | Sbjct 121870 TCATGTGTTGAGGGCGTTCGGCAACCTTGCCATTTATTCTGAGAAGATAAGAGCGTTCGA 121811 Query 63841 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATT 63898 || || ||||| || || | || |||||| || || |||| ||| ||||||| Sbjct 121810 GGGTCTTGAAACCGAAGTATTGATAGTTAAAGTCACGGTCATAAACAATGGCCGAATT 121753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629815930983360