Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20amestolkiae_20[genbank_20GCA_5F001896365.1_202016-12- 09] 212 sequences; 33,721,883 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq170 176 7e-39 >seq170 Length=1587042 Score = 176 bits (194), Expect = 7e-39 Identities = 585/902 (65%), Gaps = 86/902 (10%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||||| | |||||||| ||||| | ||||||| ||||||| Sbjct 1429715 ATCTGGCAAATGTACAAGAAGGCCGAAGCCTCCTTCTGGACCGCCGAAGAGATCGATCTC 1429656 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || || || || |||| ||| | | || ||| || |||||| | ||||| ||| Sbjct 1429655 TCGAAAGATTTGCACGACTGGAACAACCGCCTGAACGACGATGAGCGTTACTTTATTTCG 1429596 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTG-TTGACACG 125197 || | | || |||||||| | ||| ||||| || ||||| || || || |||| || Sbjct 1429595 CATGTCCTTGCATTCTTTGCTGCCTCTGATGGCATTGTCAATGAGAACTTGGTTGAG-CG 1429537 Query 125198 ATTCTCTCAAGA-GTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATG 125255 |||| | || ||| | || || || | ||| ||||| ||||| ||||| |||||| Sbjct 1429536 ATTCAGTGGTGAAGTTCAG-ATCCCTGAAGC-TCGATGCTTCTACGGTTTCCAGATCATG 1429479 Query 125256 ATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG 125315 || |||||| | ||||| |||| |||||| || ||||||| |||||| ||| || Sbjct 1429478 ATGGAGAACATTCACTCCGAAACATACTCTCTCCTCATTGACACCTACATTAACGAACCC 1429419 Query 125316 ---CAACGTA-----------------------AACAC-ATGCTCTTT------------ 125336 ||||| | |||| | | ||||| Sbjct 1429418 AAACAACGCACCTACCTTTTTGACGCCATTGACAACAGTAAGTTCTTTGCAACACCTAAG 1429359 Query 125337 ---------AACGCAATCGA-----CACGGTGCCGTCTATACGTAAAAAGGCTCAATGGG 125382 || ||||| | ||| || || | || || || |||||| | |||| Sbjct 1429358 TACAAAACAAAGCCAATCTAACTTGCACAGTTCCCTGCATTCGCAAGAAGGCTGATTGGG 1429299 Query 125383 TGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCG 125442 | || |||||| ||| | ||||| | | || | | || || |||||||| | Sbjct 1429298 CTCTGCGATGGATCTCGGACAAAGAGTCTACCTTTGCTCAGCGCCTTGTCGCATTCGCTG 1429239 Query 125443 CCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCG 125502 |||| || || || ||||| || || |||||| | ||||| ||| | |||||||| | Sbjct 1429238 CCGTCGAAGGTATTTTCTTCTCTGGCTCTTTTGCCTCTATCTTCTGGTTGAAGAAGCGTG 1429179 Query 125503 GACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACT 125562 | | ||||| || |||| | ||||| | || ||||| ||||||||||| ||| Sbjct 1429178 GTTTGATGCCTGGTTTGACCTTCTCCAACGAACTCATCTCTCGTGACGAGGGCCTTCACA 1429119 Query 125563 GTGACTTTGCCATTC-TACTGTT-TCGCAACT--ATCTGCGTCCCGAGTGC--AGATCCA 125616 ||||||| ||| | | || || || || || | |||||| || | || | Sbjct 1429118 CCGACTTTG-CATGCTTGCTCTTCTCCCACCTCAACAACCGTCCC-AGCCCCAAGGT--- 1429064 Query 125617 GCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTAA 125676 || |||| | || |||||| ||||||||| || ||||||||||| | | Sbjct 1429063 -CGTTGAAGA------CATCATTGT---CGATGCCGTTGCCATCGAACAAGAGTTCTTGA 1429014 Query 125677 CCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACATAG 125736 |||| |||| || | || | || ||||||| || | |||||| ||||||| | Sbjct 1429013 CCGATGCCCTTCCTTGCGCTTTGCTCGGAATGAACTCGAAATTGATGTGCCAGTACATTG 1428954 Query 125737 AGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGA---TTTACAACGCCA 125793 |||| || || || ||||| || || ||||| ||||| ||||| |||| Sbjct 1428953 AGTTCGTTGCCGACCGTCTCTTGGTCG---CTCTTGGCAACAAGAAGTACTACAATGCCA 1428897 Query 125794 AGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGAGA 125853 || ||||| || |||||| | ||| || || | || ||||| ||||| ||||||| Sbjct 1428896 CCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGCCGGCAAGACTAACTTCTTCGAGA 1428837 Query 125854 AG 125855 || Sbjct 1428836 AG 1428835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741057236193120