Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20amestolkiae_20[genbank_20GCA_5F001896365.1_202016-12- 09] 212 sequences; 33,721,883 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq111 127 5e-24 seq170 89.7 1e-12 >seq111 Length=2402707 Score = 127 bits (140), Expect = 5e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || ||||||||||| || ||||| || || || || | ||||| Sbjct 1716515 AAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTATAATCGGAGAGGGTACGGCCGTC 1716456 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || ||||| || |||||||| || || | ||| || |||||||| || ||||| || || Sbjct 1716455 CTCGAGTTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGAATACCTTCCTTGTC 1716396 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||||||| | || || || || | |||||| | || ||||| || || || || Sbjct 1716395 CTGAATCTTCGACTTAACGTTGTCGATGGTATCAGAGGACTCGACCTCAAGGGTGATGGT 1716336 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || ||||| || || || || |||||||| Sbjct 1716335 TTTGCCGGTAAGAGTCTTGACGAAAATCTGCAT 1716303 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || || |||| || ||||||||||| || || ||||| || || || | || ||| Sbjct 1716742 AGGACAAGGTGTAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATCT 1716683 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || ||||| || ||||| ||||| | | ||| || || ||||| || |||||||| || Sbjct 1716682 TCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCGGGAGGAATACCTTCTTTGTCT 1716623 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 ||||| || | ||| || || || | ||| || | ||| || || | ||| || ||| Sbjct 1716622 TGAATTTTGGATTTCACGTTATCGATGGTGTCTGAGGATTCGACTTCCAATGTGATCGTC 1716563 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || || || || || |||||||| Sbjct 1716562 TTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 1716531 Score = 120 bits (132), Expect = 7e-22 Identities = 138/186 (74%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 104374 CTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAG 104433 |||||| || |||||||| || || | |||||| || || || || |||||||| || | Sbjct 1716201 CTGAATGTTGTAGTCAGAGAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATCAA 1716142 Query 104434 CCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTAC 104493 | ||| || |||||||| || || || || ||||||||||| | || || || || | Sbjct 1716141 ACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGAT 1716082 Query 104494 GGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATAT 104553 |||||| || || ||||| || || || ||||| ||||| || || || || || || Sbjct 1716081 GGTATCCGAAGACTCCACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACGAAGAT 1716022 Query 104554 CTGCAT 104559 |||||| Sbjct 1716021 CTGCAT 1716016 >seq170 Length=1587042 Score = 89.7 bits (98), Expect = 1e-12 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197 || || || || || || |||||||| ||||| || || ||||||||| ||||||| ||| Sbjct 1429251 GTCGCATTCGCTGCCGTCGAAGGTATTTTCTTCTCTGGCTCTTTTGCCTCTATCTTCTGG 1429192 Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257 |||||||| | || | ||||| || || || ||||| |||||| | || | ||| Sbjct 1429191 TTGAAGAAGCGTGGTTTGATGCCTGGTTTGACCTTCTCCAACGAACTCATCTCTCGTGAC 1429132 Query 269258 GAAGGTTTACACTGCGACTTCGCTTGttt 269286 || || | ||| |||||| || || || Sbjct 1429131 GAGGGCCTTCACACCGACTTTGCATGCTT 1429103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151395272514096