Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20amestolkiae_20[genbank_20GCA_5F001896365.1_202016-12- 09] 212 sequences; 33,721,883 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq158 140 2e-28 seq46 114 9e-21 seq111 95.1 8e-15 >seq158 Length=8299 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 864 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 923 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 924 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 958 >seq46 Length=925568 Score = 114 bits (126), Expect = 9e-21 Identities = 230/338 (68%), Gaps = 5/338 (1%) Strand=Plus/Minus Query 6152 ATCGACCACGATGGGGACCCTGAACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTA 6211 |||||| || |||| ||| | ||||| ||| |||| | ||| | |||||||| || Sbjct 415560 ATCGAC-ACCATGGCTACCGTCAACGTTCGTCGCGATGTTACCGACCCCTTCTACCGTTA 415502 Query 6212 CAAAATGCCGCGCATCTGC--GCCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTC 6269 ||| ||| | | | || | |||||| ||||||||||||| |||||||| || |||||| Sbjct 415501 CAAGATG--GAGAAGCTCCAGGCCAAGATCGAGGGTAAGGGTAACGGTATCAAGACCGTC 415444 Query 6270 ATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAA 6329 |||| ||| || |||||| || | |||| || ||| || |||| | || Sbjct 415443 GTTGTGAACTTGAACACCGTCGCTCAGTCCCTCGCTCGTCCTCCCGAGTACCTCATCAAG 415384 Query 6330 TATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAGCGCTTCATC 6389 || ||||| | ||| |||| |||||| | | | | | || |||| || | || Sbjct 415383 TACTTCGGATTTGAAATTGGAGCTCAGGCCAACGCTAAGCCCACTGACGATCGTTGGATT 415324 Query 6390 GTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTTATTCGCAAG 6449 | ||||| | || || || ||||||| |||||||| | || || || || ||| Sbjct 415323 ATCAACGGTGCCCACGACGCTCCCAAGCTTCAGGACTTGTTGGATGGTTTCATCGACAAA 415264 Query 6450 TTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 ||||| || || | | ||| | ||||| || ||||| Sbjct 415263 TTTGTTCTCTGCAAGAAGTGCAAGAACCCCGAAACCGA 415226 >seq111 Length=2402707 Score = 95.1 bits (104), Expect = 8e-15 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 38108 CACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTC 38167 |||||| |||||||| |||||| || || ||||||||||| | | ||| | || || Sbjct 1716968 CACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGTCCATCTTC 1716909 Query 38168 TAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCAT 38227 | ||| || || || || || | || || || || | |||| ||| || || || Sbjct 1716908 CAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGGGATGCCCTCCTTATCTTG 1716849 Query 38228 AATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTT 38287 || || ||||||||| | | || || ||||||||||||||| || || || Sbjct 1716848 GATCTTGCTCTTCACATTGTCAATTGTGTCGGATGATTCAACTTCTAATGTGATGGTCTT 1716789 Query 38288 ACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || |||||||| || ||||| |||||||| Sbjct 1716788 GCCGGTCAAGGTCTTGACGAAAATCTGCAT 1716759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334946334580172