Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20amestolkiae_20[genbank_20GCA_5F001896365.1_202016-12- 09] 212 sequences; 33,721,883 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq111 131 1e-25 seq136 104 2e-17 seq1 89.7 4e-13 >seq111 Length=2402707 Score = 131 bits (144), Expect = 1e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || ||| | ||||| ||||| |||| ||||| || || || | Sbjct 1716303 ATGCAGATTTTCGTCAAGACTCTTACCGGCAAAACCATCACCCTTGAGGTCGAGTCCTCT 1716362 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | | || || ||||| |||||||| |||||||| || || || Sbjct 1716363 GATACCATCGACAACGTTAAGTCGAAGATTCAGGACAAGGAAGGTATTCCTCCTGACCAG 1716422 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||| ||||| || | ||||| ||| ||| |||||||||| ||| Sbjct 1716423 CAGCGCCTGATCTTTGCTGGCAAGCAACTCGAGGACGGCCGTACCCTCTCCGATTATAAC 1716482 Query 22399 ATTCAAAAAGAATCCAC 22415 || || ||||||||||| Sbjct 1716483 ATCCAGAAAGAATCCAC 1716499 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | || || || ||| |||| | ||||| ||| || | Sbjct 1716531 ATGCAGATCTTCGTCAAGACTCTCACTGGAAAGACGATCACATTGGAAGTCGAATCCTCA 1716590 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | | ||| |||||||||||||| || |||||||| ||||| || Sbjct 1716591 GACACCATCGATAACGTGAAATCCAAAATTCAAGACAAAGAAGGTATTCCTCCCGACCAG 1716650 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || || || || || | || ||| |||||| ||||||| |||||| Sbjct 1716651 CAGCGATTGATTTTCGCTGGTAAGCAACTTGAAGATGGCCGCACACTCTCCGACTACAAC 1716710 Query 22399 ATTCAAAAAGAATCCACCATACA 22421 || || ||||||||||| |||| Sbjct 1716711 ATCCAGAAAGAATCCACTCTACA 1716733 Score = 109 bits (120), Expect = 5e-19 Identities = 135/185 (73%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||| ||||| ||||| | | Sbjct 1716016 ATGCAGATCTTCGTCAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAGTCTTCG 1716075 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | |||| || ||||| ||||||||||||||||| || || || Sbjct 1716076 GATACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCAG 1716135 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || ||||| ||||| ||| | ||||| |||||| |||| || |||||| Sbjct 1716136 CAGCGTTTGATCTTTGCTGGCAAGCAGCTCGAGGACGGTCGCACCCTCTCTGACTACAAC 1716195 Query 22399 ATTCA 22403 ||||| Sbjct 1716196 ATTCA 1716200 >seq136 Length=310984 Score = 104 bits (114), Expect = 2e-17 Identities = 131/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 ||| || || || | || || || || |||| || || || || || |||| ||| | Sbjct 29797 TTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACCAT 29738 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| || |||| || || || |||||||||||||| || ||||| || || ||||| Sbjct 29737 CGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCT 29678 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || |||||||| || ||| | || ||| |||||| ||||||| |||||||| || || Sbjct 29677 GATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGCACTCTCTCCGACTACAACATCCAGAA 29618 >seq1 Length=3931711 Score = 89.7 bits (98), Expect = 4e-13 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370 ||||||||||||||| || ||||| || || ||| | || || ||||| || ||| | || Sbjct 1419544 AGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTTTGATCTTCGCCGGAAAGCAGCTCGA 1419485 Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGT 22427 || ||||||| ||||||| |||||||| || || || |||||| | || || || Sbjct 1419484 AGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCCACCCTTCACTTGGT 1419428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419726915527780