Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20amestolkiae_20[genbank_20GCA_5F001896365.1_202016-12- 09] 212 sequences; 33,721,883 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq111 143 6e-29 seq136 111 4e-19 >seq111 Length=2402707 Score = 143 bits (158), Expect = 6e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || || |||| ||| |||||| ||||| ||||| |||| | Sbjct 1716529 CCACCACGGAGACGAAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTATAATCGGAG 1716470 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | ||| || || || |||||||| ||||| || | || Sbjct 1716469 AGGGTACGGCCGTCCTCGAGTTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGA 1716410 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || ||||| || |||| || ||||| || || | ||| || || || Sbjct 1716409 ATACCTTCCTTGTCCTGAATCTTCGACTTAACGTTGTCGATGGTATCAGAGGACTCGACC 1716350 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| || || ||||| |||||||||||||| |||||||| Sbjct 1716349 TCAAGGGTGATGGTTTTGCCGGTAAGAGTCTTGACGAAAATCTGCAT 1716303 Score = 143 bits (158), Expect = 6e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || || | ||| |||||| ||||| || ||||||| | Sbjct 1716757 CCACCACGGAGACGGAGGACAAGGTGTAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAG 1716698 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||| | ||| || || ||||| |||| ||||| || || Sbjct 1716697 AGTGTGCGGCCATCTTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCGGGAGGA 1716638 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || |||||||| || || ||||| | ||||||||| || || | || ||||| ||| Sbjct 1716637 ATACCTTCTTTGTCTTGAATTTTGGATTTCACGTTATCGATGGTGTCTGAGGATTCGACT 1716578 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | ||||||||||| || || |||||||||||||| |||||||| Sbjct 1716577 TCCAATGTGATCGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 1716531 Score = 129 bits (142), Expect = 1e-24 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | ||| || | |||| || || || ||||| || || || | Sbjct 1716985 CCACCGCGGAGGCGAAGCACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGAA 1716926 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || |||||||| ||||| | ||| || || ||||| |||| ||||| || | |||| Sbjct 1716925 AGAGTGCGTCCATCTTCCAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGGG 1716866 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || || || ||||| ||||| || ||| ||||| || || || | ||| ||||| || Sbjct 1716865 ATGCCCTCCTTATCTTGGATCTT-GCTCTTCACATTGTCAATTGTGTCGGATGATTCAAC 1716807 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| | ||||| ||||| ||||||| ||||||||||| |||||||| Sbjct 1716806 TTCTAATGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAAATCTGCAT 1716759 Score = 98.7 bits (108), Expect = 2e-15 Identities = 135/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 288289 TGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGA 288348 || || || ||||| | ||| ||||| ||||| || | || || || || ||||||| | Sbjct 1716200 TGAATGTTGTAGTCAGAGAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATCAAA 1716141 Query 288349 CGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATA 288408 ||||| || | || || || || || ||||| || || | || ||||| || || Sbjct 1716140 CGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATG 1716081 Query 288409 GAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATC 288468 | ||| || || || || || ||||| ||||| || || || ||||||||||| ||| Sbjct 1716080 GTATCCGAAGACTCCACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACGAAGATC 1716021 Query 288469 TGCATTATG 288477 ||||| ||| Sbjct 1716020 TGCATAATG 1716012 >seq136 Length=310984 Score = 111 bits (122), Expect = 4e-19 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || ||||||| ||| ||||| || ||||| | || ||||| || |||||| Sbjct 29618 TTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATC 29677 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 |||||||| || ||||| || || || |||||||| |||| || || || || Sbjct 29678 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG 29737 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | ||| || || || ||||| ||||| ||||| || || || ||||||||||| Sbjct 29738 ATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 29796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179651195763736