Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20amestolkiae_20[genbank_20GCA_5F001896365.1_202016-12- 09] 212 sequences; 33,721,883 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq170 120 7e-22 >seq170 Length=1587042 Score = 120 bits (132), Expect = 7e-22 Identities = 317/474 (67%), Gaps = 14/474 (3%) Strand=Plus/Minus Query 243289 TTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 243348 |||||| |||| || ||||| | | ||| ||||||||| | || || || ||| Sbjct 1429266 TTTGCTCAGCGCCTTGTCGCATTCGCTGCCGTCGAAGGTATTTTCTTCTCTGGCTCTTTT 1429207 Query 243349 TGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAG 243408 | | ||||| ||| || ||| ||| |||||||||| | | || ||||| Sbjct 1429206 GCCTCTATCTTCTGGTTGAAGAAGCGTGGTTTGATGCCTGGTTTGACCTTCTCCAACGAA 1429147 Query 243409 TTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTA-TGTATTCAAAGCT 243467 ||||| ||| ||||||||||||||| | || | |||| | | || | || Sbjct 1429146 CTCATCTCTCGTGACGAGGGCCTTCACACCGACTTTGCAT-GCTTGCTCTTCTCCCACCT 1429088 Query 243468 CCAGAACAAGC-TACCATTCGAAACG--GTCAAACAAATCATCACAGAAGCAGTTGAAAA 243524 | ||||| | | ||| | || | || || | ||||| || || |||| | Sbjct 1429087 C---AACAACCGTCCCAGCCCCAAGGTCGTTGAAGACATCATTGTCGATGCCGTTGCCAT 1429031 Query 243525 CGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTA--TTGGCATGAACTCTGAA 243582 |||| | || ||| | ||| || |||| ||| |||| | || |||||||| || Sbjct 1429030 CGAACAAGAGTTCTTGACCGATGCCCTTCCTTGC--GCTTTGCTCGGAATGAACTCGAAA 1428973 Query 243583 CTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAG 243642 | ||| | |||||||| || ||||| |||||||| | || |||| ||||| | || Sbjct 1428972 TTGATGTGCCAGTACATTGAGTTCGTTGCCGACCGTCTCTTGGTCGCTCTTGGCAACAAG 1428913 Query 243643 AAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAA 243702 || ||||| ||| |||||||| | ||| |||||| ||| || ||| || || Sbjct 1428912 AAGTACTACAATGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGCCGGCAAG 1428853 Query 243703 ACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA-ACGCCCTGGTGTGATGAA 243755 |||||||||||||| |||||||| |||| || || | | || ||||| ||||| Sbjct 1428852 ACTAACTTCTTCGAGAAGCGTGTTGGTGACTACCAGAAGGCC-GGTGTCATGAA 1428800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102877004302200