Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20amestolkiae_20[genbank_20GCA_5F001896365.1_202016-12- 09] 212 sequences; 33,721,883 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq170 167 2e-36 seq136 120 3e-22 seq111 105 7e-18 seq1 95.1 1e-14 >seq170 Length=1587042 Score = 167 bits (184), Expect = 2e-36 Identities = 327/478 (68%), Gaps = 4/478 (1%) Strand=Plus/Plus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684 ||||| || || ||||| || || | | ||| ||| | ||| || || ||||||||| Sbjct 1428836 TTCTCGAAGAAGTTAGTCTTGCCGGCAAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTG 1428895 Query 132685 GCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCG 132744 | | ||||||| ||| || | || |||| | || | |||||| |||||||| Sbjct 1428896 GTGGCATTGTAGTACTTCTTGTTGCCAAGAGCGACCAAGAGACGGTCGGCAACGAACTCA 1428955 Query 132745 ATGTATTGCGACATGG-TTTCGCAATTAAGTCCCAGCAGA-CGCACCGGCAGCGCTTCGG 132802 ||||| || |||| ||||| | || | ||| |||| | |||| || || || |||| Sbjct 1428956 ATGTACTGGCACATCAATTTCG-AGTTCATTCCGAGCAAAGCGCAA-GGAAGGGCATCGG 1429013 Query 132803 TGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGC 132862 | | || ||| |||||||| || || ||| | ||| || |||| | | || Sbjct 1429014 TCAAGAACTCTTGTTCGATGGCAACGGCATCGACAATGATGTCTTCAACGACCTTGGGGC 1429073 Query 132863 TCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGT 132922 | || || | | || ||| | |||||| ||||||||| || | |||||||| Sbjct 1429074 TGGGACGGTTGTTGAGGTGGGAGAAGAGCAAGCATGCAAAGTCGGTGTGAAGGCCCTCGT 1429133 Query 132923 CCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCC 132982 | | || |||||||||||| ||| ||||| || ||||| | || || || || | || Sbjct 1429134 CACGAGAGATGAGTTCGTTGGAGAAGGTCAAACCAGGCATCAAACCACGCTTCTTCAACC 1429193 Query 132983 AAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCA 133042 | || || | ||| ||| ||| || ||||| | || |||||||| ||||| || || | Sbjct 1429194 AGAAGATAGAGGCAAAAGAGCCAGAGAAGAAAATACCTTCGACGGCAGCGAATGCGACAA 1429253 Query 133043 GGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTT 133100 |||||| | || || | |||||| | |||||| ||||| ||||| || ||||| Sbjct 1429254 GGCGCTGAGCAAAGGTAGACTCTTTGTCCGAGATCCATCGCAGAGCCCAATCAGCCTT 1429311 >seq136 Length=310984 Score = 120 bits (132), Expect = 3e-22 Identities = 135/181 (75%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || ||||||||||| ||||||||| |||| |||||| || |||||| | | Sbjct 29796 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACCATC 29737 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || |||| ||||| ||||| || ||| ||||||| ||||| || Sbjct 29736 GACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCTG 29677 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | || || || ||||| || || | ||||| ||| ||||||||||||||| ||| Sbjct 29676 ATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGCACTCTCTCCGACTACAACATCCAGAAG 29617 Query 38433 G 38433 | Sbjct 29616 G 29616 >seq111 Length=2402707 Score = 105 bits (116), Expect = 7e-18 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || || || ||||| | || ||||| || | Sbjct 1716531 ATGCAGATCTTCGTCAAGACTCTCACTGGAAAGACGATCACATTGGAAGTCGAATCCTCA 1716590 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | ||| ||||| | |||||||| || ||||| ||||||| Sbjct 1716591 GACACCATCGATAACG-TGAAATCCAAAATTCAAGACAAAGAAGGTATTCCTCCCGACCA 1716649 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | |||| ||| || || || || || || | ||||| ||| ||||||||| Sbjct 1716650 GCAGCGATTGATTTTCGCTGGTAAGCAACTTGAAGATGGCCGCACACTCTCCGACTACAA 1716709 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| || ||| | || || || | || || ||| Sbjct 1716710 CATCCAGAAAGAATCCACTCTACACCTTGTCCTCCGT 1716746 Score = 100 bits (110), Expect = 3e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||||||||||||| | || |||||| || | Sbjct 1716303 ATGCAGATTTTCGTCAAGACTCTTACCGGCAAAACCATCACCCTTGAGGTCGAGTCCTCT 1716362 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| |||| || || | ||||| || || ||||| | ||||| Sbjct 1716363 GATACCATCGACAACG-TTAAGTCGAAGATTCAGGACAAGGAAGGTATTCCTCCTGACCA 1716421 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | || ||||| || || || |||| || |||||| ||| || || Sbjct 1716422 GCAGCGCCTGATCTTTGCTGGCAAGCAACTCGAGGACGGCCGTACCCTCTCCGATTATAA 1716481 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| || ||| | || || || | || || ||| Sbjct 1716482 CATCCAGAAAGAATCCACTCTTCACCTTGTCCTTCGT 1716518 Score = 86.0 bits (94), Expect = 6e-12 Identities = 132/186 (71%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || || ||||||||| | || || ||| | | Sbjct 1716016 ATGCAGATCTTCGTCAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAGTCTTCG 1716075 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | || || || | ||||| ||||| ||||| | ||||| Sbjct 1716076 GATACCATCGACAACG-TCAAGTCCAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCA 1716134 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | || | || ||||| ||||| || |||| ||||||||| |||||||| Sbjct 1716135 GCAGCGTTTGATCTTTGCTGGCAAGCAGCTCGAGGACGGTCGCACCCTCTCTGACTACAA 1716194 Query 38423 CATCCA 38428 ||| || Sbjct 1716195 CATTCA 1716200 >seq1 Length=3931711 Score = 95.1 bits (104), Expect = 1e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| ||||| || ||| ||||||| ||||| | || | ||| || || ||||| || Sbjct 1419543 GACAAGGAGGGTATCCCCCCCGACCAGCAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAA 1419484 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 |||| ||||||||| ||||||||||||||| ||||| | || || || ||||| || Sbjct 1419483 GACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCCACCCTTCACTTGGTCCTC 1419424 Query 38457 CG 38458 || Sbjct 1419423 CG 1419422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171474542080