Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20amestolkiae_20[genbank_20GCA_5F001896365.1_202016-12- 09] 212 sequences; 33,721,883 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq24 91.5 1e-12 >seq24 Length=1109238 Score = 91.5 bits (100), Expect = 1e-12 Identities = 220/331 (66%), Gaps = 4/331 (1%) Strand=Plus/Minus Query 517978 TTTATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATCAAAATCT 518035 ||||| ||| || ||||| |||| || | ||| | || |||||| ||| || || Sbjct 1034036 TTTATGTTTCCTTTTGAACTCTTGGACGAA--ATGGTTAACGAGACGAGAATCGAAGTCC 1033979 Query 518036 TCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGA 518095 ||||| ||||| | ||| | || | || || | || | ||| | || || || | Sbjct 1033978 TCACCACCCAAGTGAGTGTCACCGGCGGTGGCCTTGACCTCGAAGATACCCTCCTCGATG 1033919 Query 518096 GACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCT 518155 | | |||| ||||| ||| |||||||| | |||||| || || || || || Sbjct 1033918 GTAAGGAGAGACACATCGAAGGTACCACCACCGAGATCAAAGATGAGGACGTTGCGCTCA 1033859 Query 518156 TTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATT 518215 || || || || ||||| || |||| ||||||||||| || || || || || Sbjct 1033858 CCCTCAGCCTTCTTGTCGAGACCGTAGGCAATGGCAGCAGCAGTAGGCTCGTTGATGATA 1033799 Query 518216 CTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCG 518275 | | || || | ||| ||||| || ||||| || ||||| || | || || ||| Sbjct 1033798 CGGAGGACGTTCAAACCGGCAATGAGACCAGCATCCTTGGTGGCCTGACGCTGGGAGTCG 1033739 Query 518276 TTAAAATATGCAGGAACAGTAATAACGGCAT 518306 || || || || || ||||| || ||||||| Sbjct 1033738 TTGAAGTAGGCGGGGACAGTGATGACGGCAT 1033708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780811879861672