Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20amestolkiae_20[genbank_20GCA_5F001896365.1_202016-12- 09] 212 sequences; 33,721,883 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq111 165 2e-35 seq1 86.0 1e-11 >seq111 Length=2402707 Score = 165 bits (182), Expect = 2e-35 Identities = 162/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| |||||||| ||||| || || ||||| |||| || || | |||||||| Sbjct 1716739 ACAAGGTGTAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCA 1716680 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || |||||||| ||||| || | ||| || ||||| |||||||| ||||||||||||||| Sbjct 1716679 AGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCGGGAGGAATACCTTCTTTGTCTTGA 1716620 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 ||||| || ||||| || |||||||| || ||| ||||| | || | ||||||| Sbjct 1716619 ATTTTGGATTTCACGTTATCGATGGTGTCTGAGGATTCGACTTCCAATGTGATCGTCTTT 1716560 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||| || ||||| | ||||| Sbjct 1716559 CCAGTGAGAGTCTTGACGAAGATCTGCAT 1716531 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||||||||| ||||| || || || ||||||| || || | || || ||| Sbjct 1716511 ACAAGGTGAAGAGTGGATTCTTTCTGGATGTTATAATCGGAGAGGGTACGGCCGTCCTCG 1716452 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || ||||| || || ||||| || || || ||||| |||||||| ||||| ||||| ||| Sbjct 1716451 AGTTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGAATACCTTCCTTGTCCTGA 1716392 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| ||||| || ||||| || || || || |||||||| | || || Sbjct 1716391 ATCTTCGACTTAACGTTGTCGATGGTATCAGAGGACTCGACCTCAAGGGTGATGGTTTTG 1716332 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||| || ||||| | ||||| Sbjct 1716331 CCGGTAAGAGTCTTGACGAAAATCTGCAT 1716303 Score = 122 bits (134), Expect = 2e-22 Identities = 138/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 194956 TGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGT 195015 ||||| ||||| || | || || | || || ||||||||||| || || ||||| | Sbjct 1716200 TGAATGTTGTAGTCAGAGAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATCAAA 1716141 Query 195016 CGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATG 195075 || || ||||| |||||||| || || ||||| ||||| || ||||||||| || ||| Sbjct 1716140 CGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATG 1716081 Query 195076 GTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACT 195135 || |||||| ||||| |||||||| | |||||||| || | || || ||||| | Sbjct 1716080 GTATCCGAAGACTCCACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACGAAGATC 1716021 Query 195136 TGCAT 195140 ||||| Sbjct 1716020 TGCAT 1716016 >seq1 Length=3931711 Score = 86.0 bits (94), Expect = 1e-11 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| |||||||| || || || ||||| |||| || || | || ||||||||||| Sbjct 1419433 GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCGAGCTG 1419492 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 ||| || |||||||| | || || ||||| || || || || || |||||| Sbjct 1419493 CTTTCCGGCGAAGATCAAACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCT 1419544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109478586370604