Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20amestolkiae_20[genbank_20GCA_5F001896365.1_202016-12- 09] 212 sequences; 33,721,883 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq1 167 3e-36 seq170 109 6e-19 >seq1 Length=3931711 Score = 167 bits (184), Expect = 3e-36 Identities = 621/964 (64%), Gaps = 13/964 (1%) Strand=Plus/Minus Query 47886 GATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTCAGCACAT 47945 || |||| || || ||||| ||||||| ||| | ||||| || || || | || Sbjct 122702 GAAGCTAAGTTGCAGACAGCAACCTCATCAGGAGCACAATATTCAATAATCTCGGTGCAA 122643 Query 47946 AGATTACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCC 48005 || || | |||||| || | ||| | || || | ||||| || |||||| Sbjct 122642 AGGTTGGAGCTACGGATAGTGCCGAGATTCTTTTGGTTGCTTTTCTTGTTGCAAGCGTCC 122583 Query 48006 TTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACA 48065 ||||| ||||| ||||| | || || || |||||| |||| || | | ||| | Sbjct 122582 TTGTAGAGCATGAAAGGGTTACCGGTCTCAGTCTGAGCCTCAAGAATGGCGTACCAGAGC 122523 Query 48066 GTCCTAGCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTA--TTTAGTATATAACT 48123 || ||| || ||| | | | | || ||||| ||| ||||| | | Sbjct 122522 TTCTGAGCTTTGATAGTACGACGACCACGGCCCTCCCTCTCGTACTTTTCGTATAGAGCA 122463 Query 48124 TCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATG 48183 || ||| || || ||||| || | | | | |||| | |||||||| || | ||| | Sbjct 122462 TC--AAACTCTTCGCCATAGACGTCAGCAAGACCAGAAGCCTCATTAGGGCAAAACAAGG 122405 Query 48184 ACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATA- 48242 ||| |||| || | ||| | | ||| || | ||| || |||| | || ||| Sbjct 122404 TCCAGTCCTGATTGGCCTCTACACGACGCATGAAGAGATCAGGGGTCCACAAGGC-ATAG 122346 Query 48243 AATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCC 48302 || ||||| | | | | ||| || |||||| ||| | || ||||| || || Sbjct 122345 AACAAATCACGGGCACGGACTTCCTCTTTGCCATGGTTCTTGCGGAGGTCAAGGAACTCG 122286 Query 48303 ATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCT 48362 | | ||| | |||||||| || | || || || | |||| || ||||| ||||| Sbjct 122285 AAGACATCCGAGTGCCATGGCTCGAGGTAGATAGCAAAAGCACCAGGACGTTTGTTACCG 122226 Query 48363 CCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTT 48422 ||||| || | ||| |||||||| ||||| | ||||| | ||| || |||| ||| ||| Sbjct 122225 CCTTGGTCAACATACCTGGCAGTGTTGTTGAATACTCTGAGCATAGGCACAAGACCGTTT 122166 Query 48423 GATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATAT--TACTAATTGAAA 48480 || |||| |||||||| || || ||| | | | || | | ||||| Sbjct 122165 GAAGTACCGTTGGTTCCTCCGATGTAGGAACCAGTGGAACGGATGCGGTGCACATTGAGG 122106 Query 48481 TACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTC 48540 || |||||||| || ||||| || | |||||| || || |||||||| || | Sbjct 122105 --CCAATACCACCGGCAGACTTAGAAATCATAGCACATGTCTTGAGAGTATCATAGATGC 122048 Query 48541 CTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAG 48600 | || ||||| || || |||| | | || || ||| || | ||| || | || Sbjct 122047 CCTCAATACTGTCCTCCTTCATGTCCACAAGGAAGCAAGAAGCGAGTTGTGGTCGGGGAG 121988 Query 48601 TTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTAT 48660 | || | ||| || ||||||||||| ||||| | || | |||| || | || || | Sbjct 121987 TACCCGCATTGAACAATGTTGGAGAGGCATGTGTGAAGTACTTCTGAGACATTAAGTTGT 121928 Query 48661 ATGTTTCAATAACAGAATCTATA-TCCCATTGATGTATACCTATAGATACACGCATTAAC 48719 |||| |||||| | || ||| || || | || ||||| | || |||||||| | | Sbjct 121927 ATGTCTCAATAGCTTTTTCAATATTCTCACCG-TGAATACCGACAGCAACACGCATGATC 121869 Query 48720 ATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAAT 48779 || | |||||| | ||| ||| ||| ||||||| | | |||||| || ||| | Sbjct 121868 ATGTGTTGAGGGCGTTCGGCAACCTTGCCATTTATTCTGAGAAGATAAGAGCGTTCGAGG 121809 Query 48780 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCGTTATCATTAATAATTGATGAATT-TAT 48838 || || ||||| || || | || |||||| |||| || ||| | ||||| || Sbjct 121808 GTCTTGAAACCGAAGTATTGATAGTTAAAGTCACGGTCATAAACAATGGCCGAATTCAAT 121749 Query 48839 TCTT 48842 |||| Sbjct 121748 TCTT 121745 >seq170 Length=1587042 Score = 109 bits (120), Expect = 6e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 18957 CAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGT 19016 ||| |||||||| || || || |||||||| | | || | ||| || || || || Sbjct 1429102 CAAGCATGCAAAGTCGGTGTGAAGGCCCTCGTCACGAGAGATGAGTTCGTTGGAGAAGGT 1429161 Query 19017 TAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAA 19076 ||||||||||||| || | || || |||||||| ||||| ||||| || ||||| || Sbjct 1429162 CAAACCAGGCATCAAACCACGCTTCTTCAACCAGAAGATAGAGGCAAAAGAGCCAGAGAA 1429221 Query 19077 GAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATT 19136 ||| |||||||| || || || || || || || | | || | ||| || || | Sbjct 1429222 GAAAATACCTTCGACGGCAGCGAATGCGACAAGGCGCTGAGCAAAGGTAGACTCTTTGTC 1429281 Query 19137 ATGAATCCATTTCAGTGCCCAATCAGCCTTCTT 19169 |||||| ||| ||||||||||||||||| Sbjct 1429282 CGAGATCCATCGCAGAGCCCAATCAGCCTTCTT 1429314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562107310411680