Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20amestolkiae_20[genbank_20GCA_5F001896365.1_202016-12-
09] 212 sequences; 33,721,883 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq1 167 3e-36
seq170 109 6e-19
>seq1
Length=3931711
Score = 167 bits (184), Expect = 3e-36
Identities = 621/964 (64%), Gaps = 13/964 (1%)
Strand=Plus/Minus
Query 47886 GATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTCAGCACAT 47945
|| |||| || || ||||| ||||||| ||| | ||||| || || || | ||
Sbjct 122702 GAAGCTAAGTTGCAGACAGCAACCTCATCAGGAGCACAATATTCAATAATCTCGGTGCAA 122643
Query 47946 AGATTACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCC 48005
|| || | |||||| || | ||| | || || | ||||| || ||||||
Sbjct 122642 AGGTTGGAGCTACGGATAGTGCCGAGATTCTTTTGGTTGCTTTTCTTGTTGCAAGCGTCC 122583
Query 48006 TTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACA 48065
||||| ||||| ||||| | || || || |||||| |||| || | | ||| |
Sbjct 122582 TTGTAGAGCATGAAAGGGTTACCGGTCTCAGTCTGAGCCTCAAGAATGGCGTACCAGAGC 122523
Query 48066 GTCCTAGCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTA--TTTAGTATATAACT 48123
|| ||| || ||| | | | | || ||||| ||| ||||| | |
Sbjct 122522 TTCTGAGCTTTGATAGTACGACGACCACGGCCCTCCCTCTCGTACTTTTCGTATAGAGCA 122463
Query 48124 TCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATG 48183
|| ||| || || ||||| || | | | | |||| | |||||||| || | ||| |
Sbjct 122462 TC--AAACTCTTCGCCATAGACGTCAGCAAGACCAGAAGCCTCATTAGGGCAAAACAAGG 122405
Query 48184 ACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATA- 48242
||| |||| || | ||| | | ||| || | ||| || |||| | || |||
Sbjct 122404 TCCAGTCCTGATTGGCCTCTACACGACGCATGAAGAGATCAGGGGTCCACAAGGC-ATAG 122346
Query 48243 AATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCC 48302
|| ||||| | | | | ||| || |||||| ||| | || ||||| || ||
Sbjct 122345 AACAAATCACGGGCACGGACTTCCTCTTTGCCATGGTTCTTGCGGAGGTCAAGGAACTCG 122286
Query 48303 ATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCT 48362
| | ||| | |||||||| || | || || || | |||| || ||||| |||||
Sbjct 122285 AAGACATCCGAGTGCCATGGCTCGAGGTAGATAGCAAAAGCACCAGGACGTTTGTTACCG 122226
Query 48363 CCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTT 48422
||||| || | ||| |||||||| ||||| | ||||| | ||| || |||| ||| |||
Sbjct 122225 CCTTGGTCAACATACCTGGCAGTGTTGTTGAATACTCTGAGCATAGGCACAAGACCGTTT 122166
Query 48423 GATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATAT--TACTAATTGAAA 48480
|| |||| |||||||| || || ||| | | | || | | |||||
Sbjct 122165 GAAGTACCGTTGGTTCCTCCGATGTAGGAACCAGTGGAACGGATGCGGTGCACATTGAGG 122106
Query 48481 TACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTC 48540
|| |||||||| || ||||| || | |||||| || || |||||||| || |
Sbjct 122105 --CCAATACCACCGGCAGACTTAGAAATCATAGCACATGTCTTGAGAGTATCATAGATGC 122048
Query 48541 CTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAG 48600
| || ||||| || || |||| | | || || ||| || | ||| || | ||
Sbjct 122047 CCTCAATACTGTCCTCCTTCATGTCCACAAGGAAGCAAGAAGCGAGTTGTGGTCGGGGAG 121988
Query 48601 TTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTAT 48660
| || | ||| || ||||||||||| ||||| | || | |||| || | || || |
Sbjct 121987 TACCCGCATTGAACAATGTTGGAGAGGCATGTGTGAAGTACTTCTGAGACATTAAGTTGT 121928
Query 48661 ATGTTTCAATAACAGAATCTATA-TCCCATTGATGTATACCTATAGATACACGCATTAAC 48719
|||| |||||| | || ||| || || | || ||||| | || |||||||| | |
Sbjct 121927 ATGTCTCAATAGCTTTTTCAATATTCTCACCG-TGAATACCGACAGCAACACGCATGATC 121869
Query 48720 ATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAAT 48779
|| | |||||| | ||| ||| ||| ||||||| | | |||||| || ||| |
Sbjct 121868 ATGTGTTGAGGGCGTTCGGCAACCTTGCCATTTATTCTGAGAAGATAAGAGCGTTCGAGG 121809
Query 48780 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCGTTATCATTAATAATTGATGAATT-TAT 48838
|| || ||||| || || | || |||||| |||| || ||| | ||||| ||
Sbjct 121808 GTCTTGAAACCGAAGTATTGATAGTTAAAGTCACGGTCATAAACAATGGCCGAATTCAAT 121749
Query 48839 TCTT 48842
||||
Sbjct 121748 TCTT 121745
>seq170
Length=1587042
Score = 109 bits (120), Expect = 6e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 18957 CAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGT 19016
||| |||||||| || || || |||||||| | | || | ||| || || || ||
Sbjct 1429102 CAAGCATGCAAAGTCGGTGTGAAGGCCCTCGTCACGAGAGATGAGTTCGTTGGAGAAGGT 1429161
Query 19017 TAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAA 19076
||||||||||||| || | || || |||||||| ||||| ||||| || ||||| ||
Sbjct 1429162 CAAACCAGGCATCAAACCACGCTTCTTCAACCAGAAGATAGAGGCAAAAGAGCCAGAGAA 1429221
Query 19077 GAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATT 19136
||| |||||||| || || || || || || || | | || | ||| || || |
Sbjct 1429222 GAAAATACCTTCGACGGCAGCGAATGCGACAAGGCGCTGAGCAAAGGTAGACTCTTTGTC 1429281
Query 19137 ATGAATCCATTTCAGTGCCCAATCAGCCTTCTT 19169
|||||| ||| |||||||||||||||||
Sbjct 1429282 CGAGATCCATCGCAGAGCCCAATCAGCCTTCTT 1429314
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562107310411680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |