Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20amestolkiae_20[genbank_20GCA_5F001896365.1_202016-12- 09] 212 sequences; 33,721,883 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq24 102 7e-16 seq111 98.7 8e-15 >seq24 Length=1109238 Score = 102 bits (112), Expect = 7e-16 Identities = 381/589 (65%), Gaps = 14/589 (2%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATG---GT 550048 ||||| ||||| ||||| |||||||| || || || ||||| | | ||| || Sbjct 1033302 GCTATCGGTATCGATTTGGGAACCACCTACTCCTGCGTGGGTGTCTTCCGCGATGACCGT 1033361 Query 550049 AAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTC 550108 | | ||||| |||||||| || || |||||| |||| || || || | ||| | ||| Sbjct 1033362 A---TCGAAATCATTGCCAACGACCAGGGTAACCGAACCACCCCCTCGTTCGTTGCCTTC 1033418 Query 550109 ACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACC 550168 || || |||| | | | |||||||||| || || |||| | | | || ||| | Sbjct 1033419 ACCGACTCTGAGCGTCTCATTGGTGATGCCGCCAAGAATCAGGTCGCCATGAACCCTCAC 1033478 Query 550169 AATACTATTTTTGATGCTAAACGTTTAATTGGAAG-AAGTTTTAATGATTCGACTGTTCA 550227 || || | || || || || ||||| || || | ||||| | || | || || Sbjct 1033479 AACACAGTCTTCGACGCCAAGCGTTTGATCGGCCGCAAGTTCTCC-GACCCTGAGGTGCA 1033537 Query 550228 GGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGA 550287 ||| ||| ||||| | || ||| | || ||| | | || || || || Sbjct 1033538 GGCTGATGCCAAGCACTTCCCCTTCAAGATCGTTGACAAGGCCACCAAGCCCGTCATCGA 1033597 Query 550288 AGCTAC--TCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTT 550345 | | ||| | || || || || || |||| || |||| || || ||||| Sbjct 1033598 GGTTGAGTTCAAGGGCGAG--GTCAAGCAGTTCACACCTGAGGAAATCTCCTCCATGGTC 1033655 Query 550346 TTAATGAAAATGAAACAAACAGCC-AGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGT 550404 || || || ||| | || ||| ||| ||| | ||| || | |||| || Sbjct 1033656 TTGATCAAGATGCGTGAGACTGCCGAGT-CTTACCTCGGTGGTACCGTCAACAATGCCGT 1033714 Query 550405 AATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACG 550464 || ||||| || || || || || ||||| || ||||| || || || |||||||| | Sbjct 1033715 CATCACTGTCCCCGCCTACTTCAACGACTCCCAGCGTCAGGCCACCAAGGATGCTGGTCT 1033774 Query 550465 TATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATA 550524 ||||| || | || || || ||||| ||||| || |||||||||||||| |||| || Sbjct 1033775 CATTGCCGGTTTGAACGTCCTCCGTATCATCAACGAGCCTACTGCTGCTGCCATTGCCTA 1033834 Query 550525 TGGACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGAT 550573 || || || || | ||| || | || || |||||||||||| Sbjct 1033835 CGGTCTCGACAAGAAGGCTGAGGGTGAGCGCAACGTCCTCATCTTTGAT 1033883 >seq111 Length=2402707 Score = 98.7 bits (108), Expect = 8e-15 Identities = 156/221 (71%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 ||||||||| ||||| || || || |||||| || ||||| || | || || | Sbjct 1716749 GAGACGGAGGACAAGGTGTAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGTGTGCG 1716690 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 |||||||||||| || || || ||||| | || ||||| || |||||||| ||||| Sbjct 1716689 GCCATCTTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCGGGAGGAATACCTTC 1716630 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAG 563434 ||| ||||||||||| ||| || || || || || | | || | | ||| | | Sbjct 1716629 TTTGTCTTGAATTTTGGATTTCACGTTATCGATGGTGTCTGAG-GATTCGACTTCCAATG 1716571 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | | || || ||||| ||||| || ||||| || |||||| Sbjct 1716570 TGATCGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCATA 1716530 Score = 89.7 bits (98), Expect = 4e-12 Identities = 154/221 (70%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 |||||| || ||||| ||||| || |||||| || || ||||| | || || | Sbjct 1716521 GAGACGAAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTATAATCGGAGAGGGTACG 1716462 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 || || ||||| || || ||||| || || | ||||| ||||||||||| ||||| Sbjct 1716461 GCCGTCCTCGAGTTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGAATACCTTC 1716402 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAG 563434 || || ||||| || || || || || ||||||| | || | | || || | Sbjct 1716401 CTTGTCCTGAATCTTCGACTTAACGTTGTCGATGGTATCAGAG-GACTCGACCTCAAGGG 1716343 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | | ||||| || |||||||| || |||||||| |||||| Sbjct 1716342 TGATGGTTTTGCCGGTAAGAGTCTTGACGAAAATCTGCATA 1716302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029284788483880