Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20amestolkiae_20[genbank_20GCA_5F001896365.1_202016-12- 09] 212 sequences; 33,721,883 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq100 125 8e-24 >seq100 Length=776889 Score = 125 bits (138), Expect = 8e-24 Identities = 192/274 (70%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 139282 CTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTG 139341 ||||||| | || ||| |||||||||| || || |||||||| || || ||||| | Sbjct 646682 CTGCATACATGGCACTCATGTTTGCGAGCAAGGCCTGAGCTGTGCAAATATTGCTGGTAG 646623 Query 139342 CTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTATGCAGGATTGC 139401 | || || | | ||||||||| || | ||| || | || |||| | ||| | |||| Sbjct 646622 CCTTCTCGCGACGAATATGCTGTTCACGAGTCTGCAAAGCCAATCGGAGAGCACGGTTGC 646563 Query 139402 CTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATCTTTCTCTTATACTTGTCTG 139461 | | ||| ||| ||| || | | ||||| ||||| | ||| |||||||||| Sbjct 646562 CCAATCGGTCTTTGGACACACCAACTAAACGACCAGGAATCTTACGCTTGTACTTGTCTG 646503 Query 139462 TTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATAGGAATACCAAACCTTTGCA 139521 | || |||||||| ||||| || ||||| ||| | |||||||| | ||||| | || Sbjct 646502 TGGTAGCAAAGAAAGCAGCGTGGGGACCACCGAAACCCATAGGCACACCAAGTCGCTGTG 646443 Query 139522 TACTACCTACAGCAATATCAAATCCCCACTCACC 139555 ||||| | ||||||||| || ||||||| Sbjct 646442 CGCTACCGAATGCAATATCAGCACCGAACTCACC 646409 Score = 111 bits (122), Expect = 2e-19 Identities = 262/390 (67%), Gaps = 7/390 (2%) Strand=Plus/Minus Query 138180 GCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTA 138239 || ||||| || ||||| || || ||||| |||||||| || || |||||||||||||| Sbjct 647838 GCGACACCGATGGGACCGACACCGGGACCACCACCTCCGTGAGGGATACAGAATGTCTTG 647779 Query 138240 TGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGT 138299 || | || ||||| || ||||| |||||| |||| || | ||| | ||| Sbjct 647778 TGCAGGTTGAGATGGCACACATCGGCACCAATCTCACCAGGAGAGCACAAACCGATCTGG 647719 Query 138300 GCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACAT 138359 ||||| | || || || || | |||||||||||||| | | || ||||| | || Sbjct 647718 GCATTCATGTTGGCGCCGTCCATGTATACCTGACCACCGTACTTGTGCACGATATCGCAA 647659 Query 138360 ATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACAT 138419 | | ||| | ||| || |||||| || |||||||| |||||||| Sbjct 647658 ACTTCCTTGACACCAGGTTCGAAGACACCAAAGGTACTGGGATATGTGATCATAATGGCA 647599 Query 138420 GAGAGTTCAAATGTATTCATGATTGCTTTCTTC--TCTAGATCTTTGATGTCTATGTTGC 138477 | || ||| | | | | | || || | | || || |||| ||| || | ||| | Sbjct 647598 GCAAGCTCATCCTTGTGC-TTCTCGCATTTTACCTTCAAG-TCTTCGATATCGAGGTTAC 647541 Query 138478 C-ATCAT--CATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAG 138534 | || | || ||||||| | || |||||||| || |||||| |||||||||| | Sbjct 647540 CGGTCTTGGTGTCGCACTTGATAGTAACGACTTTCATACCGGCCATGGCTGCACTAGCTG 647481 Query 138535 GATTAGTTCCATGTGCTGACTCTGGTATCA 138564 | || ||||| || || ||| | || |||| Sbjct 647480 GGTTTGTTCCGTGAGCAGACACAGGAATCA 647451 Score = 87.8 bits (96), Expect = 2e-12 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 ||| |||||||| || ||||| | || || | | || || ||||| | ||||| || Sbjct 646078 CATAGCCTCTGCCGCAGCAGTACCCTCGTCCAGCACCGAGGCATTTGCAACGGGTAAACC 646019 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978 ||||| || ||| | | || ||| |||| || || | ||||||| |||||| || Sbjct 646018 AGTAAGATCCGTGGTCAAAGTCTGGAAATTCAACAATGACTCCAATCGACCCTGACTGAT 645959 Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTC 140034 ||||| ||||||||||| || || |||||| |||||||| | ||| |||| Sbjct 645958 CTCAGGCTGATAGGGAGTATAGCTGGTATACCAAGCCGGATTCTCCAAAACATTTC 645903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578996865654240