Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20amestolkiae_20[genbank_20GCA_5F001896365.1_202016-12- 09] 212 sequences; 33,721,883 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq133 127 2e-23 seq170 104 3e-16 seq1 93.3 5e-13 >seq133 Length=509659 Score = 127 bits (140), Expect = 2e-23 Identities = 97/115 (84%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||||||||||||||||||||||| | || ||||| |||| ||||| | || || || Sbjct 184654 GCCGCCAACTACCTCGACATCAAAGCCCTTCTCGACGTTGGCTGCAAAACCGTCGCAAAT 184595 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||||||||| ||||||||||||||||||||||| ||||| || ||| Sbjct 184594 ATGATCAAGGGCAAGTCCCCCGAGGAGATCCGCAAGACCTTCAACATTCAGAACG 184540 >seq170 Length=1587042 Score = 104 bits (114), Expect = 3e-16 Identities = 174/246 (71%), Gaps = 8/246 (3%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| ||||| |||||||| | || ||||| Sbjct 1428812 GCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTAGTCTTGCCGGCAAGGGAGATG 1428871 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCC--GAGCGACG 868808 |||||| | ||| ||||||| | ||||||| ||| | | || ||||||| Sbjct 1428872 TTCTCCATGAAGTCGAAGGGGTTGGTGGCATTGTAGTACTTCTTGTTGCCAAGAGCGAC- 1428930 Query 868809 CGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGA 868868 | || || |||||||| || ||||| |||||||||||||| | | |||||| |||| Sbjct 1428931 CAAG-AGACGGTCGGCAACGAACTCAATGTACTGGCACATCAATTTCGAGTTCATTCCGA 1428989 Query 868869 --TGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGAC 868926 ||||| | || || | ||| ||| ||||||| ||||| | ||||| ||||| Sbjct 1428990 GCAAAGCGCAA--GGAAGGGCATCGGTCAAGAACTCTTGTTCGATGGCAACGGCATCGAC 1429047 Query 868927 GATGAT 868932 ||||| Sbjct 1429048 AATGAT 1429053 >seq1 Length=3931711 Score = 93.3 bits (102), Expect = 5e-13 Identities = 159/227 (70%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 ||||| || || | || |||| ||| || || | |||||| ||||| || ||||| || Sbjct 122222 TGGTCAACATACCTGGCAGTGTTGTTGAATACTCTGAGCATAGGCACAAGACCGTTTGAA 122163 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185 |||||||| || | | ||||| || | || || | |||| | | ||| Sbjct 122162 GTACCGTTGGTTCCTCCGATGTAGGAACCAGTGGAACGGATGCGGTGCACATTGAGGCCA 122103 Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGT-TTGAGCGTGTCGTAGATGCCCTC 1630244 || || ||||| ||||| || || | || || ||| ||||| || || ||||||||||| Sbjct 122102 ATACCACCGGCAGACTTAGAAATCATAGCACA-TGTCTTGAGAGTATCATAGATGCCCTC 122044 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGA--CGAGTTTTG 1630289 || ||| ||||||||||||| || ||||| || |||||| || Sbjct 122043 AATACTGTCCTCCTTCATGTCCACAAGGAAGCAAGAAGCGAGTTGTG 121997 Score = 91.5 bits (100), Expect = 2e-12 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 18121 GTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGCCACTGGCCGAGGCCGACATCCAG 18180 || ||||||||| |||| ||| || || ||||| | || |||||||||||||||| Sbjct 513189 GTAGGCTGCATCGTCGATGGCTGCCCTCCAGGCATGGCTCTCACCGAGGCCGACATCCAA 513130 Query 18181 CCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACTTTCCACGCCGCGCAACGAGCCC 18240 ||||| || || ||||| || |||||| |||| || |||| || ||||| || Sbjct 513129 CCTCAAATGACCCGTCGCCGTCCCGGCCAGAGCGCTCTCACCACCCCCCGCAATGAAAAG 513070 Query 18241 GATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCC 18293 || | ||| || ||||| || || ||| | ||| ||| |||||| |||| Sbjct 513069 GACAGAGTCGAGATTCAGTCCGGTACTGAGTATGGCTACACCCTCGGCACGCC 513017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107121802287204