Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20amestolkiae_20[genbank_20GCA_5F001896365.1_202016-12- 09] 212 sequences; 33,721,883 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq111 96.9 3e-15 seq170 89.7 5e-13 >seq111 Length=2402707 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || | ||||| ||| || | Sbjct 1716531 ATGCAGATCTTCGTCAAGACTCTCACTGGAAAGACGATCACATTGGAAGTCGAATCCTCA 1716590 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| ||| | ||| || |||||||||||||| || |||||||| || Sbjct 1716591 GACACCATCGATAACGTGAAATCCAAA-ATTCAAGACAAAGAAGGTATTCCTCCCGACCA 1716649 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || ||||| || || || || || || || ||| | | | || || || || Sbjct 1716650 GCAGCGATTGATTTTCGCTGGTAAGCAACTTGAAGATGGCCGCACACTCTCCGACTACAA 1716709 Query 24883 CATTCAAAAGGAATCGACACTACAC 24907 ||| || || ||||| || |||||| Sbjct 1716710 CATCCAGAAAGAATCCACTCTACAC 1716734 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || | ||||| || || || || | ||||| ||| | || Sbjct 1716759 ATGCAGATTTTCGTCAAGACCTTGACCGGCAAGACCATCACATTAGAAGTTGAATCATCC 1716818 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || || ||||||||||| || || || || || || || || Sbjct 1716819 GACACAATTGACAATGTGAAGAGCAAGATCCAAGATAAGGAGGGCATCCCACCTGACCAG 1716878 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||| || || || || || ||||| ||| | | | || ||||| ||| Sbjct 1716879 CAGCGATTGATTTTCGCTGGTAAGCAACTGGAAGATGGACGCACTCTTTCTGATTACAAC 1716938 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| || || || ||||||||| | || | ||||| ||| Sbjct 1716939 ATCCAGAAGGAGTCTACTCTTCACTTGGTGCTTCGCCTCCGCGGTGGC 1716986 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || || ||||| ||||| || || || || || || || | Sbjct 1716303 ATGCAGATTTTCGTCAAGACTCTTACCGGCAAAACCATCACCCTTGAGGTCGAGTCCTCT 1716362 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || |||| ||| | || ||| || ||||| ||||| || ||||| || || Sbjct 1716363 GATACCATCGACAACGTTAAGTCGAA-GATTCAGGACAAGGAAGGTATTCCTCCTGACCA 1716421 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || |||||||||| || || || || ||||| | | | | || |||||||| Sbjct 1716422 GCAGCGCCTGATCTTTGCTGGCAAGCAACTCGAGGACGGCCGTACCCTCTCCGATTATAA 1716481 Query 24883 CATTCAAAAGGAATCGACACTACAC 24907 ||| || || ||||| || || ||| Sbjct 1716482 CATCCAGAAAGAATCCACTCTTCAC 1716506 >seq170 Length=1587042 Score = 89.7 bits (98), Expect = 5e-13 Identities = 298/456 (65%), Gaps = 17/456 (4%) Strand=Plus/Minus Query 126019 GCTCGGCGCATGGTCGCTTTCGCTATAGTGGAAGGCGTGTTTTTCTCGGGTAGTTTTGCG 126078 |||| |||| | ||||| |||||| || ||||| | || ||||| || |||||| Sbjct 1429263 GCTCAGCGCCTTGTCGCATTCGCTGCCGTCGAAGGTATTTTCTTCTCTGGCTCTTTTGCC 1429204 Query 126079 GCTAttttttttATAAAGACAAAGGGTATAATGCCCGGTCTAACGTTCAGCAACGAGTTG 126138 |||| || | | |||| ||| | ||||| ||| | || ||| |||||| | Sbjct 1429203 TCTATCTTCTGGTTGAAGAAGCGTGGTTTGATGCCTGGTTTGACCTTCTCCAACGAACTC 1429144 Query 126139 ATTTCTCGTGACGAAGGACTCCATACGGACTTTGCATGTCTG-TATTACAATAATTATAT 126197 || ||||||||||| || || || || ||||||||||| || | || | | | Sbjct 1429143 ATCTCTCGTGACGAGGGCCTTCACACCGACTTTGCATGCTTGCTCTTCTCCCACCTCAAC 1429084 Query 126198 ACCCGAAAATGAA--AAGTTGTCTGCTGACGAAATTTTAAGTATGTTCATCGAAGCTGTC 126255 | ||| | ||| ||| | ||| || || | ||| ||| || || Sbjct 1429083 AACCGTCCCAGCCCCAAG--GTC-GTTGAAGACATCAT-----TGT----CGATGCCGTT 1429036 Query 126256 AACATTGAAAAGGAATTCTTTACGTCGGCGCTGCCATGCGATATGTTGGGAATGAATTCT 126315 ||| ||| | || ||||| || || || || |||| | || | |||||||| || Sbjct 1429035 GCCATCGAACAAGAGTTCTTGACCGATGCCCTTCCTTGCGCTTTGCTCGGAATGAACTCG 1428976 Query 126316 ACAGCGATGTGCGAATATATAGAGTTCGTAGCGGACCGTTTGCTCGTCGAATTACGACAA 126375 | | ||||||| | || || |||||||| || |||||| | | |||| | | ||| Sbjct 1428975 AAATTGATGTGCCAGTACATTGAGTTCGTTGCCGACCGTCTCTTGGTCGCTCTTGG-CAA 1428917 Query 126376 CC-GAAACACTTTAATACACCCAATCCATTTAACTTTATGAACAATATTTCTCTCGAGGG 126434 | ||| ||| ||| | |||| || || |||| ||| | || || || || | || Sbjct 1428916 CAAGAAGTACTACAATGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGCCGG 1428857 Query 126435 AAAGACTAACTTTTTCGAGAGACGTGTCGGAGAGTA 126470 ||||||||||| ||||||| ||||| || || || Sbjct 1428856 CAAGACTAACTTCTTCGAGAAGCGTGTTGGTGACTA 1428821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896407771360