Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20amestolkiae_20[genbank_20GCA_5F001896365.1_202016-12- 09] 212 sequences; 33,721,883 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq24 93.3 3e-13 seq170 86.0 5e-11 >seq24 Length=1109238 Score = 93.3 bits (102), Expect = 3e-13 Identities = 224/336 (67%), Gaps = 5/336 (1%) Strand=Plus/Minus Query 282145 TTTATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATCAAAATCT 282202 ||||| ||| || ||||| |||| || | ||| | || |||||| ||| || || Sbjct 1034036 TTTATGTTTCCTTTTGAACTCTTGGACGAA--ATGGTTAACGAGACGAGAATCGAAGTCC 1033979 Query 282203 TCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGA 282262 ||||| ||||| | ||| | || | || || | || | ||| | || || || | Sbjct 1033978 TCACCACCCAAGTGAGTGTCACCGGCGGTGGCCTTGACCTCGAAGATACCCTCCTCGATG 1033919 Query 282263 GACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCT 282322 | | |||| ||||| ||| |||||||| | |||||| || || || || || Sbjct 1033918 GTAAGGAGAGACACATCGAAGGTACCACCACCGAGATCAAAGATGAGGACGTTGCGCTCA 1033859 Query 282323 TTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATT 282382 || || || || ||||| || |||| ||||||||||| || || || || || Sbjct 1033858 CCCTCAGCCTTCTTGTCGAGACCGTAGGCAATGGCAGCAGCAGTAGGCTCGTTGATGATA 1033799 Query 282383 CTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCG 282442 | | || || | ||| ||||| || ||||| || ||||| || | || || ||| Sbjct 1033798 CGGAGGACGTTCAAACCGGCAATGAGACCAGCATCCTTGGTGGCCTGACGCTGGGAGTCG 1033739 Query 282443 TTAAAATATGCAGGAACAGTAATAACGGCATCTGTT 282478 || || || || || ||||| || ||||||| |||| Sbjct 1033738 TTGAAGTAGGCGGGGACAGTGATGACGGCAT-TGTT 1033704 >seq170 Length=1587042 Score = 86.0 bits (94), Expect = 5e-11 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 435133 GAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAACT 435192 || || ||||| || | |||||||||||||||||| ||||| |||| || | || ||| Sbjct 954265 GAGTTCTTCTTTCACGCTATGGCTGGTCGTGAAGGTCTTATTGATACCGCAGTCAAGACT 954324 Query 435193 GCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGATATTAAACAAGAA 435252 || || || ||||||||||| | || ||||||||| || ||||| ||| || Sbjct 954325 GCCGAAACGGGTTATATTCAGCGTAAGCTTGTCAAGGCCCTCGAAGAACTTATGGTCAAA 954384 Query 435253 TATGATGGTACAGTGAGAAA 435272 || ||||| || || |||| Sbjct 954385 TACGATGGAACTGTCCGAAA 954404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740619991695912