Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20amestolkiae_20[genbank_20GCA_5F001896365.1_202016-12- 09] 212 sequences; 33,721,883 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq111 143 5e-29 >seq111 Length=2402707 Score = 143 bits (158), Expect = 5e-29 Identities = 163/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || ||||| |||||||| || ||||| || || |||||||| ||| | | || Sbjct 1716973 CGAAGCACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGTCCA 1716914 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||| ||||| || ||||| || || | || || || || || || || || |||||| Sbjct 1716913 TCTTCCAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGGGATGCCCTCCTTA 1716854 Query 82716 TCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 ||||| ||| ||||| || ||||| ||||| || || | ||| ||||| || || || Sbjct 1716853 TCTTGGATC-TTGCTCTTCACATTGTCAATTGTGTCGGATGATTCAACTTCTAATGTGAT 1716795 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| ||||| ||||| || || |||||||| Sbjct 1716794 GGTCTTGCCGGTCAAGGTCTTGACGAAAATCTGCAT 1716759 Score = 129 bits (142), Expect = 1e-24 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || | ||| ||||| ||||||||||| || |||||||| | Sbjct 1716531 TACCACCACGGAGACGAAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTATAATCGG 1716472 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | ||||| || ||||| || ||||||||||| || | || || || |||| Sbjct 1716471 AGAGGGTACGGCCGTCCTCGAGTTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGAG 1716412 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||| || |||||||| | || || || || || |||||| | || | Sbjct 1716411 GAATACCTTCCTTGTCCTGAATCTTCGACTTAACGTTGTCGATGGTATCAGAGGACTCGA 1716352 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || | || || || ||||| || | ||||| || || |||||||| Sbjct 1716351 CCTCAAGGGTGATGGTTTTGCCGGTAAGAGTCTTGACGAAAATCTGCAT 1716303 Score = 129 bits (142), Expect = 1e-24 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || | ||| ||||| ||||||||||| || || || || | Sbjct 1716759 TACCACCACGGAGACGGAGGACAAGGTGTAGAGTGGATTCTTTCTGGATGTTGTAGTCGG 1716700 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | || ||||| ||||| || ||||| || || | || || || || |||| Sbjct 1716699 AGAGTGTGCGGCCATCTTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCGGGAG 1716640 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGG-TTCT 82760 | || ||||| || |||||||| || | ||| || || || || || || | ||| ||| Sbjct 1716639 GAATACCTTCTTTGTCTTGAATTTTGGATTTCACGTTATCGATGGTGTC-TGAGGATTCG 1716581 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| || |||||||| || || | ||||| || || |||||||| Sbjct 1716580 ACTTCCAATGTGATCGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 1716531 Score = 89.7 bits (98), Expect = 1e-12 Identities = 133/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 82625 CTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAG 82684 ||| || || || ||||| || | | |||||| || || || || ||||||||||| | Sbjct 1716201 CTGAATGTTGTAGTCAGAGAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATCAA 1716142 Query 82685 TCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAAT 82744 | || || || ||||| || || ||||| || |||||||| | || || || || || Sbjct 1716141 ACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGAT 1716082 Query 82745 CGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATAT 82804 ||||| || || || || | || || ||||| || || | ||||| || || || Sbjct 1716081 GGTATCCGAAGACTCCACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACGAAGAT 1716022 Query 82805 CTGCATTAT 82813 |||||| || Sbjct 1716021 CTGCATAAT 1716013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981824533111868