Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20amestolkiae_20[genbank_20GCA_5F001896365.1_202016-12- 09] 212 sequences; 33,721,883 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq170 125 9e-24 seq1 89.7 6e-13 seq111 82.4 9e-11 >seq170 Length=1587042 Score = 125 bits (138), Expect = 9e-24 Identities = 302/456 (66%), Gaps = 16/456 (4%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| ||||| ||||||||||||||||| ||||| ||| | | | ||| |||||||| Sbjct 1428821 TAGTCACCAACACGCTTCTCGAAGAAGTTAGTCTTGCCGGCAAGGGAGATGTTCTCCATG 1428880 Query 129788 AAATCAAATGGGTT-----CTTTGAGTTCCAAATTGCTGGCACTCCAATCTGTTTGAGGA 129842 || || || ||||| | ||| | | ||| || |||| | || Sbjct 1428881 AAGTCGAAGGGGTTGGTGGCATTGTAGTACTTCTTGTTG-----CCAAGAGCGACCAAGA 1428935 Query 129843 GACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGT 129902 |||| || | ||| |||||||||||| ||||| | |||||||| |||| | Sbjct 1428936 GACGGTCGGCAACGAACTCAATGTACTGGCACATCAATTTCGAGTTCATTCCGAGCAAAG 1428995 Query 129903 TACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGG 129962 || || || || || | |||| | | || ||| | || || || | |||| Sbjct 1428996 CGCAAGGAAGGGCATCGGTCAAGAACTCTTGTTCGATGGCAACGGCATCGACAATGATGT 1429055 Query 129963 CGTGAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACG---GCAA 130019 | | || | || | || || | ||| | |||||| || | |||| Sbjct 1429056 CTTCAACGACCTTGGGGCTGGGACGGTTGTTGAGGTGGGAGAAGAG---CAAGCATGCAA 1429112 Query 130020 ACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCA 130079 | || ||| || ||||||||||| ||||||||||| || |||||| || ||| |||| Sbjct 1429113 AGTCGGTGTGAAGGCCCTCGTCACGAGAGATGAGTTCGTTGGAGAAGGTCAAACCAGGCA 1429172 Query 130080 TGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCT 130139 | | ||| ||||||||||||||||| || | ||| |||||||||||||| || || | Sbjct 1429173 TCAAACCACGCTTCTTCAACCAGAAGATAGAGGCAAAAGAGCCAGAGAAGAAAATACCTT 1429232 Query 130140 CCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 130175 | || ||||| || | || |||| |||||||| Sbjct 1429233 CGACGGCAGCGAATGCGACAAGGCGCTGAGCAAAGG 1429268 >seq1 Length=3931711 Score = 89.7 bits (98), Expect = 6e-13 Identities = 349/543 (64%), Gaps = 13/543 (2%) Strand=Plus/Minus Query 118702 TAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTA 118761 |||| || || | ||| || | || || |||| |||||| | || || || | Sbjct 122716 TAGGCAGAGCAAGTGAAGCTAAGTTGCAGACAGCAACCTCATCAGGAGCACAATATTCAA 122657 Query 118762 TAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTG 118821 |||| || ||||| | ||| || || || ||||| | |||||||| || || Sbjct 122656 TAATCTCGGTGCAAAGGTTGGAGCTACGGATAGTGCCGAGATTCTTTTGGTTGCTTTTCT 122597 Query 118822 TGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAA 118881 |||| || || |||||||| |||||| | || | || ||||| || || | || |||| Sbjct 122596 TGTTGCAAGCGTCCTTGTAGAGCATGAAAGGGTTACCGGTCTCAGTCTGAGCCTCAAGAA 122537 Query 118882 TAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCT-CGCCCCTCTTCCTCGTA 118939 | || | ||||| | || | |||| | ||| || | | || ||||| |||||| Sbjct 122536 TGGCGTACCAGAGCTTCTG-AGCTTTGATAGTA-CGACGACCACGGCCCTCCCTCTCGTA 122479 Query 118940 CTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATC 118999 |||| ||| || || ||||||||||| || | | || | || || | |||| || Sbjct 122478 CTTTTCGTATAGAGCATCAAACTCTTCGCCATAGACGTCAGCAAGACCAGAAGCCTCATT 122419 Query 119000 TGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGAT 119059 ||||| || | | ||| | | |||| || || ||||||||| || ||| | Sbjct 122418 AGGGCAAAACAAGGTCCAGTCCTGATTGGCCTCTACACGACGCATGAAGAGATCAGGGGT 122359 Query 119060 CCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAA 119119 ||| | || |||| | ||| || || |||| || | || || || || | Sbjct 122358 CCACAAGGCATAGAACAAATCACGGGCACGGACTTCCTCTTTGCCATGGTTCTTGCGGAG 122299 Query 119120 CTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTT 119179 || | || || | || ||||| |||||| || || ||||| | || | | || Sbjct 122298 GTCAAGGAACTCGAAGACATCCGAGTGCCATGGCTCGAGGTAGATAGCAAAAGCACC--- 122242 Query 119180 ACGACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCAT 119233 | |||| ||| | |||| |||||||| |||||| ||| ||||| | ||||| Sbjct 122241 AGGACGTTTGTTACCGCCTTGGTCAACATACCTGGCAGTGTTGTTGAATACTCTGAGCAT 122182 Query 119234 TGG 119236 || Sbjct 122181 AGG 122179 >seq111 Length=2402707 Score = 82.4 bits (90), Expect = 9e-11 Identities = 162/236 (69%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 14234 TTACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAACT 14293 ||||||| ||| || |||||||||||||| | || || ||| ||| | || ||| Sbjct 458617 TTACCGATGGCATCGATTTCATCGATGAAGATAATGCACGGTGTATTCTTTCGAGCATTG 458558 Query 14294 TCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGG-- 14351 | || | || ||||||| || ||| || || ||||||||||| || || | | Sbjct 458557 GCGAATAAGTCGCGCACTCGAGAGGGACCAACGCCGACAAACATCTCAACGAACTCAGAT 458498 Query 14352 CGGCGGAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGG 14411 | | | ||| | || ||| || || ||||||||| ||| |||| |||||| | | Sbjct 458497 CCACTG-ACACT-GAAGAAAGGTACACCAGATTCACCAGCGGTGGCCTTGGCGAGCAATG 458440 Query 14412 TCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACCA 14467 |||| || || ||||| || | | || ||||||||| ||||| | |||||| Sbjct 458439 TCTTACCAGTACCTGGCGGTCCAGACAAAATGGCACCACGAGGGATTTTTGCACCA 458384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618433561146720