Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20amestolkiae_20[genbank_20GCA_5F001896365.1_202016-12-
09] 212 sequences; 33,721,883 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq170 125 9e-24
seq1 89.7 6e-13
seq111 82.4 9e-11
>seq170
Length=1587042
Score = 125 bits (138), Expect = 9e-24
Identities = 302/456 (66%), Gaps = 16/456 (4%)
Strand=Plus/Plus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
||||| ||||| ||||||||||||||||| ||||| ||| | | | ||| ||||||||
Sbjct 1428821 TAGTCACCAACACGCTTCTCGAAGAAGTTAGTCTTGCCGGCAAGGGAGATGTTCTCCATG 1428880
Query 129788 AAATCAAATGGGTT-----CTTTGAGTTCCAAATTGCTGGCACTCCAATCTGTTTGAGGA 129842
|| || || ||||| | ||| | | ||| || |||| | ||
Sbjct 1428881 AAGTCGAAGGGGTTGGTGGCATTGTAGTACTTCTTGTTG-----CCAAGAGCGACCAAGA 1428935
Query 129843 GACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGT 129902
|||| || | ||| |||||||||||| ||||| | |||||||| |||| |
Sbjct 1428936 GACGGTCGGCAACGAACTCAATGTACTGGCACATCAATTTCGAGTTCATTCCGAGCAAAG 1428995
Query 129903 TACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGG 129962
|| || || || || | |||| | | || ||| | || || || | ||||
Sbjct 1428996 CGCAAGGAAGGGCATCGGTCAAGAACTCTTGTTCGATGGCAACGGCATCGACAATGATGT 1429055
Query 129963 CGTGAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACG---GCAA 130019
| | || | || | || || | ||| | |||||| || | ||||
Sbjct 1429056 CTTCAACGACCTTGGGGCTGGGACGGTTGTTGAGGTGGGAGAAGAG---CAAGCATGCAA 1429112
Query 130020 ACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCA 130079
| || ||| || ||||||||||| ||||||||||| || |||||| || ||| ||||
Sbjct 1429113 AGTCGGTGTGAAGGCCCTCGTCACGAGAGATGAGTTCGTTGGAGAAGGTCAAACCAGGCA 1429172
Query 130080 TGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCT 130139
| | ||| ||||||||||||||||| || | ||| |||||||||||||| || || |
Sbjct 1429173 TCAAACCACGCTTCTTCAACCAGAAGATAGAGGCAAAAGAGCCAGAGAAGAAAATACCTT 1429232
Query 130140 CCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 130175
| || ||||| || | || |||| ||||||||
Sbjct 1429233 CGACGGCAGCGAATGCGACAAGGCGCTGAGCAAAGG 1429268
>seq1
Length=3931711
Score = 89.7 bits (98), Expect = 6e-13
Identities = 349/543 (64%), Gaps = 13/543 (2%)
Strand=Plus/Minus
Query 118702 TAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTA 118761
|||| || || | ||| || | || || |||| |||||| | || || || |
Sbjct 122716 TAGGCAGAGCAAGTGAAGCTAAGTTGCAGACAGCAACCTCATCAGGAGCACAATATTCAA 122657
Query 118762 TAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTG 118821
|||| || ||||| | ||| || || || ||||| | |||||||| || ||
Sbjct 122656 TAATCTCGGTGCAAAGGTTGGAGCTACGGATAGTGCCGAGATTCTTTTGGTTGCTTTTCT 122597
Query 118822 TGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAA 118881
|||| || || |||||||| |||||| | || | || ||||| || || | || ||||
Sbjct 122596 TGTTGCAAGCGTCCTTGTAGAGCATGAAAGGGTTACCGGTCTCAGTCTGAGCCTCAAGAA 122537
Query 118882 TAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCT-CGCCCCTCTTCCTCGTA 118939
| || | ||||| | || | |||| | ||| || | | || ||||| ||||||
Sbjct 122536 TGGCGTACCAGAGCTTCTG-AGCTTTGATAGTA-CGACGACCACGGCCCTCCCTCTCGTA 122479
Query 118940 CTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATC 118999
|||| ||| || || ||||||||||| || | | || | || || | |||| ||
Sbjct 122478 CTTTTCGTATAGAGCATCAAACTCTTCGCCATAGACGTCAGCAAGACCAGAAGCCTCATT 122419
Query 119000 TGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGAT 119059
||||| || | | ||| | | |||| || || ||||||||| || ||| |
Sbjct 122418 AGGGCAAAACAAGGTCCAGTCCTGATTGGCCTCTACACGACGCATGAAGAGATCAGGGGT 122359
Query 119060 CCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAA 119119
||| | || |||| | ||| || || |||| || | || || || || |
Sbjct 122358 CCACAAGGCATAGAACAAATCACGGGCACGGACTTCCTCTTTGCCATGGTTCTTGCGGAG 122299
Query 119120 CTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTT 119179
|| | || || | || ||||| |||||| || || ||||| | || | | ||
Sbjct 122298 GTCAAGGAACTCGAAGACATCCGAGTGCCATGGCTCGAGGTAGATAGCAAAAGCACC--- 122242
Query 119180 ACGACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCAT 119233
| |||| ||| | |||| |||||||| |||||| ||| ||||| | |||||
Sbjct 122241 AGGACGTTTGTTACCGCCTTGGTCAACATACCTGGCAGTGTTGTTGAATACTCTGAGCAT 122182
Query 119234 TGG 119236
||
Sbjct 122181 AGG 122179
>seq111
Length=2402707
Score = 82.4 bits (90), Expect = 9e-11
Identities = 162/236 (69%), Gaps = 4/236 (2%)
Strand=Plus/Minus
Query 14234 TTACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAACT 14293
||||||| ||| || |||||||||||||| | || || ||| ||| | || |||
Sbjct 458617 TTACCGATGGCATCGATTTCATCGATGAAGATAATGCACGGTGTATTCTTTCGAGCATTG 458558
Query 14294 TCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGG-- 14351
| || | || ||||||| || ||| || || ||||||||||| || || | |
Sbjct 458557 GCGAATAAGTCGCGCACTCGAGAGGGACCAACGCCGACAAACATCTCAACGAACTCAGAT 458498
Query 14352 CGGCGGAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGG 14411
| | | ||| | || ||| || || ||||||||| ||| |||| |||||| | |
Sbjct 458497 CCACTG-ACACT-GAAGAAAGGTACACCAGATTCACCAGCGGTGGCCTTGGCGAGCAATG 458440
Query 14412 TCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACCA 14467
|||| || || ||||| || | | || ||||||||| ||||| | ||||||
Sbjct 458439 TCTTACCAGTACCTGGCGGTCCAGACAAAATGGCACCACGAGGGATTTTTGCACCA 458384
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618433561146720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |