Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20amestolkiae_20[genbank_20GCA_5F001896365.1_202016-12- 09] 212 sequences; 33,721,883 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq1 127 2e-24 >seq1 Length=3931711 Score = 127 bits (140), Expect = 2e-24 Identities = 305/459 (66%), Gaps = 2/459 (0%) Strand=Plus/Plus Query 53242 TGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAA 53301 |||||| ||| |||||||| || |||||||| || || ||| | ||||| ||||||| Sbjct 121920 TGAGACATACAACTTAATGTCTCAGAAGTACTTCACACATGCCTCTCCAACATTGTTCAA 121979 Query 53302 CGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTC 53361 || ||||| | || || | | |||||||| |||| |||||||| ||| Sbjct 121980 TGCGGGTACTCCCCGACCACAACTCGCTTCTTGCTTCCTTGTGGACATGAAGGAGGACAG 122039 Query 53362 GATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGG 53421 || || |||||||| || || |||||| ||||| || || |||| | ||||| Sbjct 122040 TATTGAGGGCATCTATGATACTCTCAAGACATGTGCTATGATTTCTAAGTCTGCCGGTGG 122099 Query 53422 TATCGGTATCCAC-TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACG 53480 ||| || || | ||| | | ||||| | | || | ||| || || |||| Sbjct 122100 TATTGGCCTCAATGTGCACCG-CATCCGTTCCACTGGTTCCTACATCGGAGGAACCAACG 122158 Query 53481 GCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCA 53540 | | | || | |||||||||||| | || ||||||||||| ||| |||| || Sbjct 122159 GTACTTCAAACGGTCTTGTGCCTATGCTCAGAGTATTCAACAACACTGCCAGGTATGTTG 122218 Query 53541 ACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCG 53600 |||| || ||| || || || | || || |||||||||||||| |||||| | | Sbjct 122219 ACCAAGGCGGTAACAAACGTCCTGGTGCTTTTGCTATCTACCTCGAGCCATGGCACTCGG 122278 Query 53601 ACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTG 53660 | | | ||||| || || || || ||| || || | || || | || ||||| Sbjct 122279 ATGTCTTCGAGTTCCTTGACCTCCGCAAGAACCATGGCAAAGAGGAAGTCCGTGCCCGTG 122338 Query 53661 ACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGC 53699 | |||| || |||||| || || |||||||||| Sbjct 122339 ATTTGTTCTATGCCTTGTGGACCCCTGATCTCTTCATGC 122377 Score = 104 bits (114), Expect = 3e-17 Identities = 174/242 (72%), Gaps = 11/242 (5%) Strand=Plus/Plus Query 55689 ACGGGGGGTCCGTCCAGAA---TCTGGAGATTCCT-CTGCGTCTCAAGGAGATTTACCGG 55744 |||| || ||||||||||| | | |||||| ||| |||||| ||||| | Sbjct 123347 ACGGCGGATCCGTCCAGAACATCCCTAACATTCCTGCTG-ACATCAAGGCTCTTTACAAG 123405 Query 55745 ACGGTGTGGGAGATTCCACAGAAGAGTC--TGATTGACATGAGTGCTGATCGTGGTGCGT 55802 || || ||||||||| | ||| || || | | | ||| |||||| |||||||| | Sbjct 123406 ACTGTCTGGGAGATTTCTCAG-CGA-TCAATCCTGCAGATGGCTGCTGACCGTGGTGCTT 123463 Query 55803 ACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAGTTGA 55862 |||| |||||||| |||||||| |||||| |||| || | ||| | ||| |||| | | Sbjct 123464 ACATTGACCAGTCTCAGTCTCTCAACATCCACATGAAGGAGCCTACTATGGGCAAGATCA 123523 Query 55863 GCTCG-ATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTGCGG 55921 || | |||||||| || ||||||| ||| || ||||| || |||||||| |||| Sbjct 123524 -CTAGTATGCACTTCGCTGGTTGGAAGATGGGCCTGAAGACCGGAATGTACTACTTGCGT 123582 Query 55922 AC 55923 || Sbjct 123583 AC 123584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547214549877600