Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20amestolkiae_20[genbank_20GCA_5F001896365.1_202016-12- 09] 212 sequences; 33,721,883 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq111 194 4e-44 seq136 134 3e-26 >seq111 Length=2402707 Score = 194 bits (214), Expect = 4e-44 Identities = 170/212 (80%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||||||||||||||||||| ||||| |||||||||||||| | ||||| | || || Sbjct 1716514 AGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTATAATCGGAGAGGGTACGGCCGTCC 1716455 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || |||||||| || ||||| ||||| || ||||||||||||| |||||||||||| Sbjct 1716454 TCGAGTTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGAATACCTTCCTTGTCC 1716395 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| |||||||| |||||| || ||||| || ||||| || Sbjct 1716394 TGAATCTTCGACTTAACGTTGTCGATGGTATCAGAGGACTCGACCTCAAGGGTGATGGTT 1716335 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || |||||||| || || | |||||| Sbjct 1716334 TTGCCGGTAAGAGTCTTGACGAAAATCTGCAT 1716303 Score = 176 bits (194), Expect = 1e-38 Identities = 166/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| |||||||| ||||| |||||||| || || | || || | |||||| Sbjct 1716742 AGGACAAGGTGTAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATCT 1716683 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || ||||| || ||||| || | || || ||||| ||||||| ||||| ||||| Sbjct 1716682 TCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCGGGAGGAATACCTTCTTTGTCT 1716623 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || || || ||||||||| ||||||||||| ||| ||| || || | ||||||||| Sbjct 1716622 TGAATTTTGGATTTCACGTTATCGATGGTGTCTGAGGATTCGACTTCCAATGTGATCGTC 1716563 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||||||||| || || | |||||| Sbjct 1716562 TTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 1716531 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||||||||| ||||| || |||||||| ||||| | ||| || | ||||||| Sbjct 1716970 AGCACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGTCCATCT 1716911 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||| ||||| || ||||| || | || || |||||||| || | || ||||| || Sbjct 1716910 TCCAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGGGATGCCCTCCTTATCT 1716851 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||| || || || ||||| || |||||| || | ||||| ||| Sbjct 1716850 TGGATCTTGCTCTTCACATTGTCAATTGTGTCGGATGATTCAACTTCTAATGTGATGGTC 1716791 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | ||||| || || | |||||| Sbjct 1716790 TTGCCGGTCAAGGTCTTGACGAAAATCTGCAT 1716759 Score = 131 bits (144), Expect = 4e-25 Identities = 140/185 (76%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 210930 TGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGG 210989 || ||||| || || | ||||| | || || || ||||||||||| || ||||| | Sbjct 1716200 TGAATGTTGTAGTCAGAGAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATCAAA 1716141 Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049 || || ||||||||||||| || ||||||||||| ||||| || ||||| |||||| Sbjct 1716140 CGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATG 1716081 Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109 || || || || ||||| || ||||| |||||||| ||||| ||||| || || | | Sbjct 1716080 GTATCCGAAGACTCCACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACGAAGATC 1716021 Query 211110 TGCAT 211114 ||||| Sbjct 1716020 TGCAT 1716016 >seq136 Length=310984 Score = 134 bits (148), Expect = 3e-26 Identities = 137/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || | || || | |||||||| |||||||| || || ||||| Sbjct 29618 TTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATC 29677 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 || || || ||||| || || | || ||||||||||||||||| || || || ||| Sbjct 29678 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG 29737 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 |||||||| ||| || |||||||| ||||| ||||| |||||||| ||||| || || Sbjct 29738 ATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 29796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159148851453380