Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20amestolkiae_20[genbank_20GCA_5F001896365.1_202016-12-
09] 212 sequences; 33,721,883 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq111 194 4e-44
seq136 134 3e-26
>seq111
Length=2402707
Score = 194 bits (214), Expect = 4e-44
Identities = 170/212 (80%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|||||||||||||||||||| ||||| |||||||||||||| | ||||| | || ||
Sbjct 1716514 AGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTATAATCGGAGAGGGTACGGCCGTCC 1716455
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| || |||||||| || ||||| ||||| || ||||||||||||| ||||||||||||
Sbjct 1716454 TCGAGTTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGAATACCTTCCTTGTCC 1716395
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || ||||| |||||||| |||||| || ||||| || ||||| ||
Sbjct 1716394 TGAATCTTCGACTTAACGTTGTCGATGGTATCAGAGGACTCGACCTCAAGGGTGATGGTT 1716335
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || |||||||| || || | ||||||
Sbjct 1716334 TTGCCGGTAAGAGTCTTGACGAAAATCTGCAT 1716303
Score = 176 bits (194), Expect = 1e-38
Identities = 166/212 (78%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||||||||| |||||||| ||||| |||||||| || || | || || | ||||||
Sbjct 1716742 AGGACAAGGTGTAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATCT 1716683
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| || ||||| || ||||| || | || || ||||| ||||||| ||||| |||||
Sbjct 1716682 TCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCGGGAGGAATACCTTCTTTGTCT 1716623
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| || || ||||||||| ||||||||||| ||| ||| || || | |||||||||
Sbjct 1716622 TGAATTTTGGATTTCACGTTATCGATGGTGTCTGAGGATTCGACTTCCAATGTGATCGTC 1716563
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||||||||| || || | ||||||
Sbjct 1716562 TTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 1716531
Score = 140 bits (154), Expect = 8e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||||||||| ||||| || |||||||| ||||| | ||| || | |||||||
Sbjct 1716970 AGCACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGTCCATCT 1716911
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
||||| ||||| || ||||| || | || || |||||||| || | || ||||| ||
Sbjct 1716910 TCCAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGGGATGCCCTCCTTATCT 1716851
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||||| || || || ||||| || |||||| || | ||||| |||
Sbjct 1716850 TGGATCTTGCTCTTCACATTGTCAATTGTGTCGGATGATTCAACTTCTAATGTGATGGTC 1716791
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || | ||||| || || | ||||||
Sbjct 1716790 TTGCCGGTCAAGGTCTTGACGAAAATCTGCAT 1716759
Score = 131 bits (144), Expect = 4e-25
Identities = 140/185 (76%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 210930 TGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGG 210989
|| ||||| || || | ||||| | || || || ||||||||||| || ||||| |
Sbjct 1716200 TGAATGTTGTAGTCAGAGAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATCAAA 1716141
Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049
|| || ||||||||||||| || ||||||||||| ||||| || ||||| ||||||
Sbjct 1716140 CGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATG 1716081
Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109
|| || || || ||||| || ||||| |||||||| ||||| ||||| || || | |
Sbjct 1716080 GTATCCGAAGACTCCACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACGAAGATC 1716021
Query 211110 TGCAT 211114
|||||
Sbjct 1716020 TGCAT 1716016
>seq136
Length=310984
Score = 134 bits (148), Expect = 3e-26
Identities = 137/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| |||||||| || || | || || | |||||||| |||||||| || || |||||
Sbjct 29618 TTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATC 29677
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
|| || || ||||| || || | || ||||||||||||||||| || || || |||
Sbjct 29678 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG 29737
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105
|||||||| ||| || |||||||| ||||| ||||| |||||||| ||||| || ||
Sbjct 29738 ATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 29796
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159148851453380
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |