Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20amestolkiae_20[genbank_20GCA_5F001896365.1_202016-12- 09] 212 sequences; 33,721,883 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq111 170 5e-37 seq146 143 6e-29 seq136 125 2e-23 >seq111 Length=2402707 Score = 170 bits (188), Expect = 5e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||||||||| |||||||||||||| |||| ||||| |||| | || | |||||| Sbjct 1716742 AGGACAAGGTGTAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATCT 1716683 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| |||||||| || | ||| || |||||||| ||||||||||| |||||| Sbjct 1716682 TCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCGGGAGGAATACCTTCTTTGTCT 1716623 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || || || ||||| |||||||||||||||| ||| || || || ||||||||| Sbjct 1716622 TGAATTTTGGATTTCACGTTATCGATGGTGTCTGAGGATTCGACTTCCAATGTGATCGTC 1716563 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || | ||| || | ||| | ||||| Sbjct 1716562 TTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 1716531 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||||||||| |||||||||||||| |||| || ||||||| | || | || || Sbjct 1716514 AGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTATAATCGGAGAGGGTACGGCCGTCC 1716455 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| ||||| ||||| || || || ||||| || ||||||||||||||||| Sbjct 1716454 TCGAGTTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGAATACCTTCCTTGTCC 1716395 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| || |||||||| || |||| || || || | ||||| || Sbjct 1716394 TGAATCTTCGACTTAACGTTGTCGATGGTATCAGAGGACTCGACCTCAAGGGTGATGGTT 1716335 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | ||| || | ||| | ||||| Sbjct 1716334 TTGCCGGTAAGAGTCTTGACGAAAATCTGCAT 1716303 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| ||||| || || || |||| |||||||| | | ||| | |||||| Sbjct 1716970 AGCACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGTCCATCT 1716911 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| |||||||| || | ||| || ||||| || || || || ||||| ||| Sbjct 1716910 TCCAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGGGATGCCCTCCTTATCT 1716851 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| || || ||||| || | ||| || ||||| ||||| ||| Sbjct 1716850 TGGATCTTGCTCTTCACATTGTCAATTGTGTCGGATGATTCAACTTCTAATGTGATGGTC 1716791 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| || || | ||| | ||||| Sbjct 1716790 TTGCCGGTCAAGGTCTTGACGAAAATCTGCAT 1716759 >seq146 Length=26920 Score = 143 bits (158), Expect = 6e-29 Identities = 197/273 (72%), Gaps = 3/273 (1%) Strand=Plus/Plus Query 7441 ACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATT 7500 || ||||||||||| |||| ||||||||| | || || || |||||| | || Sbjct 17953 ACATTATATTTAATGTTTGCATTATTTTCTGGTTTAATTGGAACAGCTTTTTCTGTACTT 18012 Query 7501 ATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTAC 7560 || || ||||| ||| ||||||| ||| ||| ||| || | ||| ||| | ||| Sbjct 18013 ATTAGATTAGAGTTATCTGCTCCTGGTGTGCAA-TATATAGCAG--ATAATCAATTATAC 18069 Query 7561 AACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATG 7620 || ||||||||| || ||||| || | |||||||| ||| | |||||||| | | | Sbjct 18070 AATAGTATTATTACAGCTCATGCTATTTTAATGATTTTTTTTATGGTTATGCCAGCTTTA 18129 Query 7621 ATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTT 7680 ||||| || || || |||| || | |||||| | | || | |||||||||||| ||| Sbjct 18130 ATAGGTGGATTTGGTAATTTCTTATTACCTTTATTAGTAGGAGGTCCTGATATGGCATTT 18189 Query 7681 CCAAGGCTTAACAATATAAGTTTTTGATTACTA 7713 || || | || ||||||||||| |||||| || Sbjct 18190 CCTAGATTAAATAATATAAGTTTCTGATTATTA 18222 Score = 89.7 bits (98), Expect = 1e-12 Identities = 83/103 (81%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 ||| ||||| ||||| |||||||| | |||||| | | |||||||| || || |||| Sbjct 18633 TTCTGGATGTCCAAAGAATCAGAAAAGATGTTGGAATAATATAGGATCACCACCACCTGC 18574 Query 370732 TGGATCAAA-AAAGCTAGTATTAAAATTTCTATCAGTTAAAAC 370773 | ||||| |||| | |||||||||||||||||||||||||| Sbjct 18573 AGCTTCAAAGAAAGAT-GTATTAAAATTTCTATCAGTTAAAAC 18532 >seq136 Length=310984 Score = 125 bits (138), Expect = 2e-23 Identities = 126/164 (77%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| |||| | ||| | |||||||| |||||||| || || ||||| Sbjct 29618 TTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATC 29677 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || || |||||||| || ||||| |||||||| |||||||| ||| ||| ||| Sbjct 29678 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG 29737 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 |||||||| |||| || || || | ||||| ||||||||||| Sbjct 29738 ATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGT 29781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192527960787128