Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20amestolkiae_20[genbank_20GCA_5F001896365.1_202016-12- 09] 212 sequences; 33,721,883 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq111 187 5e-42 seq136 147 5e-30 seq1 105 1e-17 seq170 87.8 4e-12 >seq111 Length=2402707 Score = 187 bits (206), Expect = 5e-42 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || || |||| ||| |||||| |||||||||||||| | Sbjct 1716758 ACCACCACGGAGACGGAGGACAAGGTGTAGAGTGGATTCTTTCTGGATGTTGTAGTCGGA 1716699 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||||||||| || ||||| || || || || ||||| || || ||||| || Sbjct 1716698 GAGTGTGCGGCCATCTTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCGGGAGG 1716639 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||| || |||||||| || || | ||| ||| ||||||| ||||| || | |||||| Sbjct 1716638 AATACCTTCTTTGTCTTGAATTTTGGATTTCACGTTATCGATGGTGTCTGAGGATTCGAC 1716579 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | ||||||||||| || || | |||||| ||||| |||||||| Sbjct 1716578 TTCCAATGTGATCGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 1716531 Score = 156 bits (172), Expect = 9e-33 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| || |||||||| |||| || | || || || ||||||||||| |||| | Sbjct 1716985 CCACCGCGGAGGCGAAGCACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGAA 1716926 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| ||||| || ||||| || || || || ||||| || || |||||| || Sbjct 1716925 AGAGTGCGTCCATCTTCCAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGGG 1716866 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || |||||||| ||||||||| ||||| || || | || || ||||| || | ||| || Sbjct 1716865 ATGCCCTCCTTATCTTGGATC-TTGCTCTTCACATTGTCAATTGTGTCGGATGATTCAAC 1716807 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | ||||| ||||| || ||||| ||||| ||||| |||||||| Sbjct 1716806 TTCTAATGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAAATCTGCAT 1716759 Score = 154 bits (170), Expect = 3e-32 Identities = 145/185 (78%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 282915 TGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAA 282974 || ||||||||||||| || ||||| || ||||| || || || || |||||||||||| Sbjct 1716200 TGAATGTTGTAGTCAGAGAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATCAAA 1716141 Query 282975 CGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATA 283034 || || |||||| ||||||||||||||||| || ||||| | || ||| | ||||| Sbjct 1716140 CGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATG 1716081 Query 283035 GTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATC 283094 || ||||||| || || || || ||||| ||||| || || | ||||| ||||| ||| Sbjct 1716080 GTATCCGAAGACTCCACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACGAAGATC 1716021 Query 283095 TGCAT 283099 ||||| Sbjct 1716020 TGCAT 1716016 >seq136 Length=310984 Score = 147 bits (162), Expect = 5e-30 Identities = 140/179 (78%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| | || ||||||||||| || || || || |||||||||||| Sbjct 29618 TTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATC 29677 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | ||| || ||||| || |||||||||||||| |||||||| | || || | ||| Sbjct 29678 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG 29737 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || ||||| || | ||||| ||||| ||||| ||||| ||||| | ||||| ||||| Sbjct 29738 ATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 29796 >seq1 Length=3931711 Score = 105 bits (116), Expect = 1e-17 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || |||| || | ||| || || |||||||||||||| | Sbjct 1419409 ACCACCACGGAGGCGGAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 1419468 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||| || || || || || ||||| ||||||||||| || ||||| || Sbjct 1419469 GAGGGTGCGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCGGGGGG 1419528 Query 282992 AATACCCTCCTTGTCT 283007 ||||||||||||||| Sbjct 1419529 GATACCCTCCTTGTCT 1419544 >seq170 Length=1587042 Score = 87.8 bits (96), Expect = 4e-12 Identities = 159/233 (68%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 230178 GTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAAT 230237 ||||| | ||| | |||||| | ||| || |||||||| | | |||| ||||| Sbjct 1429038 GTTGCCATCGAACAAGAGTTCTTGACCGATGCCCTTCCTTGCGCTTTGCTCGGAATGAAC 1428979 Query 230238 GCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGG 230297 | | | ||| | || || || || ||||| || || ||| | || || || || || Sbjct 1428978 TCGAAATTGATGTGCCAGTACATTGAGTTCGTTGCCGACCGTCTCTTGGTCGCTCTTGGC 1428919 Query 230298 TACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAG 230357 || |||| || || ||| |||||||||| || |||||| ||| || || Sbjct 1428918 AACAAGAAGTACTACAATGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGCC 1428859 Query 230358 GGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410 || || |||||||||||||| |||||||| | || || || | | ||||||| Sbjct 1428858 GGCAAGACTAACTTCTTCGAGAAGCGTGTTGGTGACTACCAGAAGGCCGGTGT 1428806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046736356794648