Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20amestolkiae_20[genbank_20GCA_5F001896365.1_202016-12- 09] 212 sequences; 33,721,883 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq111 129 5e-25 seq1 114 1e-20 seq136 111 1e-19 >seq111 Length=2402707 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || ||| || ||||| |||||||| |||||| Sbjct 1716529 CCACCACGGAGACGAAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTATAATCGGAG 1716470 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || |||| ||||| |||||||| || || ||||||||||| ||||| | ||| Sbjct 1716469 AGGGTACGGCCGTCCTCGAGTTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGA 1716410 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||||||||| ||| | || | | |||| | | | || || ||||| || Sbjct 1716409 ATACCTTCCTTGTCC-TGAATCTTCGACTTAACGTTGTCGATGGTATCAGAGGACTCGAC 1716351 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || || ||||| || || || ||||| |||||||||||||| Sbjct 1716350 CTCAAGGGTGATGGTTTTGCCGGTAAGAGTCTTGACGAAAATCTGCAT 1716303 Score = 114 bits (126), Expect = 1e-20 Identities = 139/187 (74%), Gaps = 2/187 (1%) Strand=Plus/Minus Query 41677 CTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAG 41736 ||||||||| ||||| ||||||||||| |||| |||||||||||||| || || |||| Sbjct 1716201 CTGAATGTTGTAGTCAGAGAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATCAA 1716142 Query 41737 GCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-A 41795 ||||| ||||| | |||| | |||||||||| ||| | || | | ||| | | | Sbjct 1716141 ACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCC-TGAATCTTGGACTTGACGTTGTCGA 1716083 Query 41796 CAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAA 41855 || || ||||||||||| | || || || || || || || ||||| ||||| | Sbjct 1716082 TGGTATCCGAAGACTCCACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACGAAGA 1716023 Query 41856 TCTGCAT 41862 ||||||| Sbjct 1716022 TCTGCAT 1716016 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || ||| || ||||| ||||| ||||||||| Sbjct 1716757 CCACCACGGAGACGGAGGACAAGGTGTAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAG 1716698 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || || ||||| || ||||| |||| ||||| ||||| | ||| Sbjct 1716697 AGTGTGCGGCCATCTTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCGGGAGGA 1716638 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | || |||| | ||| |||| | || ||| | | ||||| || || || Sbjct 1716637 ATACCTTCTTTGT-CTTGAATTTTGGATTTCACGTTATCGATGGTGTCTGAGGATTCGAC 1716579 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || ||||| || || || || ||||| ||||| |||||||| Sbjct 1716578 TTCCAATGTGATCGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 1716531 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| || || | ||||| || || || ||||||||| ||||| || || || Sbjct 1716986 GCCACCGCGGAGGCGAAGCACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGA 1716927 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || ||||| | || || || ||||| || ||||| |||| ||||| ||||| | || Sbjct 1716926 AAGAGTGCGTCCATCTTCCAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGG 1716867 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACA-GTGTCGCTCGACTCCA 41813 | || |||||| || ||| || ||||| | | || |||||| || || | Sbjct 1716866 GATGCCCTCCTTATCTTGGATCTTGCTCTTCA-CATTGTCAATTGTGTCGGATGATTCAA 1716808 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || | || || || || || |||| ||||| |||||||||||||| Sbjct 1716807 CTTCTAATGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAAATCTGCAT 1716759 >seq1 Length=3931711 Score = 114 bits (126), Expect = 1e-20 Identities = 108/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 ||| || || || || || | |||| || || ||| ||||||||| ||||| ||||| Sbjct 1419406 ACCACCACCACGGAGGCGGAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTC 1419465 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751 |||||||||||| |||| ||||||||||| |||||||| |||| ||||| ||||| | Sbjct 1419466 GGAGAGGGTGCGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCGGG 1419525 Query 41752 GGGAACGCTCTCCTTGTC 41769 ||| | | ||||||||| Sbjct 1419526 GGGGATACCCTCCTTGTC 1419543 >seq136 Length=310984 Score = 111 bits (122), Expect = 1e-19 Identities = 136/184 (74%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| ||||||||||| ||||| | || || |||||||| ||||| || | Sbjct 29616 CCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGA 29675 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGA 41790 |||| ||||| ||||| | ||| | | |||||||||| ||| || ||| || | Sbjct 29676 TCAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGT 29735 Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 || | |||||| ||||| ||||| | || || || || ||||| || ||||| || Sbjct 29736 CG--ATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGAC 29793 Query 41851 GAAA 41854 |||| Sbjct 29794 GAAA 29797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462302774894400