Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20amestolkiae_20[genbank_20GCA_5F001896365.1_202016-12-
09] 212 sequences; 33,721,883 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq111 129 5e-25
seq1 114 1e-20
seq136 111 1e-19
>seq111
Length=2402707
Score = 129 bits (142), Expect = 5e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | || || || || ||| || ||||| |||||||| ||||||
Sbjct 1716529 CCACCACGGAGACGAAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTATAATCGGAG 1716470
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
||||| || |||| ||||| |||||||| || || ||||||||||| ||||| | |||
Sbjct 1716469 AGGGTACGGCCGTCCTCGAGTTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGA 1716410
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | ||||||||| ||| | || | | |||| | | | || || ||||| ||
Sbjct 1716409 ATACCTTCCTTGTCC-TGAATCTTCGACTTAACGTTGTCGATGGTATCAGAGGACTCGAC 1716351
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||| | || || ||||| || || || ||||| ||||||||||||||
Sbjct 1716350 CTCAAGGGTGATGGTTTTGCCGGTAAGAGTCTTGACGAAAATCTGCAT 1716303
Score = 114 bits (126), Expect = 1e-20
Identities = 139/187 (74%), Gaps = 2/187 (1%)
Strand=Plus/Minus
Query 41677 CTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAG 41736
||||||||| ||||| ||||||||||| |||| |||||||||||||| || || ||||
Sbjct 1716201 CTGAATGTTGTAGTCAGAGAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATCAA 1716142
Query 41737 GCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-A 41795
||||| ||||| | |||| | |||||||||| ||| | || | | ||| | | |
Sbjct 1716141 ACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCC-TGAATCTTGGACTTGACGTTGTCGA 1716083
Query 41796 CAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAA 41855
|| || ||||||||||| | || || || || || || || ||||| ||||| |
Sbjct 1716082 TGGTATCCGAAGACTCCACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACGAAGA 1716023
Query 41856 TCTGCAT 41862
|||||||
Sbjct 1716022 TCTGCAT 1716016
Score = 98.7 bits (108), Expect = 9e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | || || || || ||| || ||||| ||||| |||||||||
Sbjct 1716757 CCACCACGGAGACGGAGGACAAGGTGTAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAG 1716698
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| | || || || ||||| || ||||| |||| ||||| ||||| | |||
Sbjct 1716697 AGTGTGCGGCCATCTTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCGGGAGGA 1716638
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | || |||| | ||| |||| | || ||| | | ||||| || || ||
Sbjct 1716637 ATACCTTCTTTGT-CTTGAATTTTGGATTTCACGTTATCGATGGTGTCTGAGGATTCGAC 1716579
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| || ||||| || || || || ||||| ||||| ||||||||
Sbjct 1716578 TTCCAATGTGATCGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 1716531
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| ||||| || || | ||||| || || || ||||||||| ||||| || || ||
Sbjct 1716986 GCCACCGCGGAGGCGAAGCACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGA 1716927
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|| ||||| | || || || ||||| || ||||| |||| ||||| ||||| | ||
Sbjct 1716926 AAGAGTGCGTCCATCTTCCAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGG 1716867
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACA-GTGTCGCTCGACTCCA 41813
| || |||||| || ||| || ||||| | | || |||||| || || |
Sbjct 1716866 GATGCCCTCCTTATCTTGGATCTTGCTCTTCA-CATTGTCAATTGTGTCGGATGATTCAA 1716808
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
| || | || || || || || |||| ||||| ||||||||||||||
Sbjct 1716807 CTTCTAATGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAAATCTGCAT 1716759
>seq1
Length=3931711
Score = 114 bits (126), Expect = 1e-20
Identities = 108/138 (78%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691
||| || || || || || | |||| || || ||| ||||||||| ||||| |||||
Sbjct 1419406 ACCACCACCACGGAGGCGGAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTC 1419465
Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751
|||||||||||| |||| ||||||||||| |||||||| |||| ||||| ||||| |
Sbjct 1419466 GGAGAGGGTGCGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCGGG 1419525
Query 41752 GGGAACGCTCTCCTTGTC 41769
||| | | |||||||||
Sbjct 1419526 GGGGATACCCTCCTTGTC 1419543
>seq136
Length=310984
Score = 111 bits (122), Expect = 1e-19
Identities = 136/184 (74%), Gaps = 4/184 (2%)
Strand=Plus/Plus
Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732
||||||| ||||| ||||||||||| ||||| | || || |||||||| ||||| || |
Sbjct 29616 CCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGA 29675
Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGA 41790
|||| ||||| ||||| | ||| | | |||||||||| ||| || ||| || |
Sbjct 29676 TCAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGT 29735
Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850
|| | |||||| ||||| ||||| | || || || || ||||| || ||||| ||
Sbjct 29736 CG--ATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGAC 29793
Query 41851 GAAA 41854
||||
Sbjct 29794 GAAA 29797
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462302774894400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |