Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12-
16] 48 sequences; 30,858,562 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq46 242 4e-59
seq24 104 3e-17
>seq46
Length=1567519
Score = 242 bits (268), Expect = 4e-59
Identities = 820/1261 (65%), Gaps = 22/1261 (2%)
Strand=Plus/Plus
Query 53597 GGATAATAATTAATATCTATAATTTTATTGAGGTTTCTGACAATTACTTTGACCACATCC 53656
|||||||| || ||||| || || || |||||||||| |||| || | | || ||
Sbjct 836286 GGATAATAGTTGATATCGATGATCTTGTTGAGGTTTCGAACAAGGACCTGGGTGACTTCG 836345
Query 53657 TTCAGTTTGAGAAAATCAAATTGTCC---ATC--TATTA-CAAACATGTTCAATGCAATA 53710
| |||||| ||| ||| ||| || | | ||| | |||| | || ||||
Sbjct 836346 TGAAGTTTGCCAAAGTCATATTCACCGCGAGCGGTATCAACAAAAGTAGGCAGAGCAAGG 836405
Query 53711 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-TATTGTATTATCTCAGTGCA 53769
|| |||| |||||||| || || |||| || | | ||| |||| || ||||| || ||
Sbjct 836406 GAAGCCAAGTTACAAACAGCGACTTCATCAGGAGC-GCAGTATTCGATAATCTCGGTACA 836464
Query 53770 AAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 53829
|| ||| || || || || | ||| | ||| || ||||| ||||| || |||||
Sbjct 836465 GAGGTTAGAACTGCGAATAGTGCCAAGATTCTTTTGGTTGCTCTTCTTGTTGCAAGCATC 836524
Query 53830 CTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGAC 53889
||| ||||| ||||| || ||||||| ||| |||| | || | || || | |||||
Sbjct 836525 CTTGTAAAGCATGAAAGGATTACCAGTCTCAGTCTGAGCCTCGAGGATGGCATACCAGAG 836584
Query 53890 GACACGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCG 53949
| ||||| | || | | ||| |||||||| ||| |
Sbjct 836585 TTTCTGGGCCTTCACAGTACGGCGGCCGCGACCTTCCTTTTCGTATTTCTCATAAAGAGC 836644
Query 53950 TTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGA 54009
|| ||||| || || | |||| | | | || || ||||| ||||| | || |
Sbjct 836645 ATCGAACTCTTCACCGTAGACATCGGCAAGACCTGGGGCTTCATTTGGACAGAACAGAGT 836704
Query 54010 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TATAA 54068
||| || || ||| ||| || ||| || || |||||| |||| | ||| || ||
Sbjct 836705 CCAGTCCTTGTTCGCCTCCACACGGCGCATGAAAAGGTCAGGAGTCCACAAAGCGTAGAA 836764
Query 54069 ATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCA 54128
| ||||| | || | ||| || ||||| ||||| ||| ||||||||| | |
Sbjct 836765 A-AGATCACGGGCACGGACTTCTTCTTTTCCATGGTTCTTACGAAGGTCGAGGAACTCAA 836823
Query 54129 TAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTC 54188
| ||| || |||||||| |||| ||| || | | | ||||| |||||||| ||||
Sbjct 836824 AGACATCTGAGTGCCACGGCTCCAGGTAGATAGCAAATGCACCAGGGCGTTTGTTACCTC 836883
Query 54189 CCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGG 54248
| || || | ||| ||||||||||| || | ||||| | ||| |||| | ||| || |
Sbjct 836884 CTTGGTCAACGTACCTAGCGGTGTTGTTGAAGACTCTGAGCATAGGAACGAGACCGTTTG 836943
Query 54249 ATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGAC 54308
| | ||||| || || || ||| ||| | ||||||||| || ||||
Sbjct 836944 AAGTGCCATTCGTTCCTCCAATGTAGGAACCAGTAGCACGAATACGGTGAACATTAAGAC 837003
Query 54309 CTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTATCATAGATGCCC 54367
| || || || || | || ||||| | || ||| || |||| ||||||||| |||||
Sbjct 837004 CGATACCACCAGCATTCTTGGAGATCATAGCACAT-GTCTTAAGCGTATCATAAATGCCG 837062
Query 54368 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 54427
|| |||||||||||| |||| | | || |||||| | | || | || ||
Sbjct 837063 TCAATACTATCATCCTTCATATCCACAAGGAAACAGGAGGCGAGCTGTGGTTGAGGCGTG 837122
Query 54428 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 54487
|| ||| | || || || || || ||||| || || |||| | ||| | ||||||||
Sbjct 837123 CCAGCACTGAACAAAGTCGGGGACGCGTGTGTGAAGTATTTCTGAGACATCAGATTGTAT 837182
Query 54488 GTCTCGATAGCTGAGTCTATA-TCCCATTGATGAATTCCTACTGCGACACGCATTAACAT 54546
|||||||| || || ||| | || | || || || || || |||||||| | |
Sbjct 837183 GTCTCGATGGCCTTTTCAATATTGTCACCG-TGGATACCAACAGCAACACGCATGATTAG 837241
Query 54547 GTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGT 54606
||| ||||| | ||| | |||||| || | ||||| || || || | |||
Sbjct 837242 GTGTTGAGGACGCTCAGCAATCTTGCCATTAAGCCGGAGCAAATAAGAGCGCTCAAGAGT 837301
Query 54607 TTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTT 54666
|| || |||||||| | ||| ||| || || || || | ||| | ||||| | |
Sbjct 837302 CTTGAATCCAAAATATTGGTAATTAAAATCCCGGTCATAGACAATGGCCGAGTTCAACTC 837361
Query 54667 ATCCTTATATTTGTTAACTACATCCATGGTA-AT---ACTTGAAATAATCGGAGAATGTT 54722
|| || ||| | || || || ||| || | | ||||| || || | ||
Sbjct 837362 GTCGGCATGTTTCATCACGACCTC----GTATATCTCAGTAGAAATCATAGGGGCCGCTT 837417
Query 54723 TCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGttttt 54782
| || || || |||||||| | | | | || | ||||| || |||| | || |
Sbjct 837418 TATTGTTCTTCGGGTTGACATAATGATAGAGGTCTTCAATCACGGCAGAAAATTGCTTCT 837477
Query 54783 ttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGAT 54842
| || | |||||||| || || ||||| || | |||||| || | || ||||| ||||
Sbjct 837478 TCGTCTGCTTGTGTAGGTTGGAAACGGCGATACGAGCGGCGAGGACAGCGTAATCGGGAT 837537
Query 54843 G 54843
|
Sbjct 837538 G 837538
Score = 84.2 bits (92), Expect = 3e-11
Identities = 200/302 (66%), Gaps = 3/302 (1%)
Strand=Plus/Plus
Query 52796 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 52855
|||| ||| | |||||| || || || ||| || | | ||||| | ||||||||||
Sbjct 835482 TCCTGGTCAACTGTGAACTGGATAGGGGCGCTGGCAGCCATTGTACGCAAATAGTACATT 835541
Query 52856 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTC 52915
|| || |||||||| | |||| ||| ||||||||| || || | ||| | |
Sbjct 835542 CCGGTCTTTAGACCCATCTTCCAACCGGCAAAATGCATGCTGGTAATCTTGCCCATAGTA 835601
Query 52916 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 52975
|| ||| || || || || | ||||| ||| || ||| | || || | || |||
Sbjct 835602 GGCTCTTTCATGTGAATGTTGAGCGATTGCGATTGGTCAATGTAAGCACCGCGATCCGCA 835661
Query 52976 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 53035
||||||| | || || || | || ||||| | || ||||| | ||| |||
Sbjct 835662 GCCATTTGAAGAATTGTTCGCTGAGAGATCTCCCAGACTGTCTTATAGAGAGCCTTGATA 835721
Query 53036 TCTTCTGGAAGGTTTG---TATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTG 53092
|| | || | ||| | |||| ||||||||||| || || | ||||| | |||||
Sbjct 835722 TCAGCGGGGATGTTGGGGATATTTTGAATAGATCCCCCTTCAGCTATAATGCGGTTCTTC 835781
Query 53093 AT 53094
||
Sbjct 835782 AT 835783
>seq24
Length=2647559
Score = 104 bits (114), Expect = 3e-17
Identities = 116/155 (75%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 24131 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 24190
||| || || |||||| || |||||||| || | | ||| | |||||||| || ||
Sbjct 1441173 CAAGCAGGCAAAATCGGTATGAAGACCCTCATCACGAGAAATCAGCTCGTTGGAGAAAGT 1441114
Query 24191 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 24250
|| || ||||| || |||||||| || ||||| || || || || || || || || ||
Sbjct 1441113 CAGACCAGGCATCAGACCACGCTTCTTGAGCCAGAAAATCGAAGCGAAGGAACCGGAGAA 1441054
Query 24251 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTC 24285
||||||||| || ||||| || ||||||| ||||
Sbjct 1441053 GAAAATTCCCTCGACTGCTGCGAAGGCAACGAGTC 1441019
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593721243767040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |