Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20atroroseus_20[genbank_20GCA_5F001907595.1_202016-12- 16] 48 sequences; 30,858,562 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq44 107 2e-18 >seq44 Length=1723839 Score = 107 bits (118), Expect = 2e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 |||||| || | ||| |||||| || || |||||||||| |||||| || | || || Sbjct 1003909 CACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCAGACAGAGTGCGGCCATCTTC 1003850 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 || |||||||||||| || || |||||||||||||| | || | || || || ||| | Sbjct 1003849 TAACTGCTTACCAGCAAAGATCAGTCGCTGCTGGTCTGGAGGAATGCCTTCTTTATCC-T 1003791 Query 43094 GATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 43152 || | || | |||| | | | ||||| ||||| || || | ||||| || | Sbjct 1003790 GAATCTTGGACTTGACGTTATCGATGGTGTCTGAAGATTCGACCTCCAATGTGATCGTCT 1003731 Query 43153 TGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| || || ||||| || ||||| ||||| Sbjct 1003730 TGCCAGTAAGAGTCTTAACGAAGATCTGCAT 1003700 Score = 89.7 bits (98), Expect = 6e-13 Identities = 133/186 (72%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 42999 TGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGT 43058 ||||| ||||| |||| || || || | || || || ||||| |||||||| || | Sbjct 1003141 TGAATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCGAGTTGCTTTCCAGCGAAGATCAAA 1003082 Query 43059 CGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCAC 43117 ||||||||||| | || | || ||| |||||| ||| || |||| ||| | | | Sbjct 1003081 CGCTGCTGGTCAGGTGGAATGCCCTCTTTGTCCTGGATCTTGGACTTGA-CGTTGTCGAT 1003023 Query 43118 CGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGAT 43177 ||||| || ||||| |||| ||||| || ||||| || || ||||| || ||||| Sbjct 1003022 GGTGTCAGAAGACTCCACCTCGAGGGTGATAGTCTTGCCTGTGAGGGTCTTGACGAAGAT 1002963 Query 43178 TTGCAT 43183 ||||| Sbjct 1002962 CTGCAT 1002957 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 || || ||||| ||||| || | | ||| || | || || ||||||||||||||||| Sbjct 1003662 TCTTTCTGAATGTTGTAGTCGGATAAAGTGCGGCCATCTTCAAGCTGCTTACCAGCGAAG 1003603 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || | ||||||||||||| || | || |||||| | | ||| | |||| | ||| Sbjct 1003602 ATCAAACGCTGCTGGTCGGGGGGAATGCCCTCCTTAT-CTTGAATCTTTGACTTCACGTT 1003544 Query 43113 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | || || ||||| || || | |||||||| || || || || ||||| || Sbjct 1003543 GTCGATGGTATCTGATGATTCGACCTCCAATGTGATGGTCTTTCCAGTAAGAGTCTTAAC 1003484 Query 43172 AAAGATTTGCAT 43183 ||||| ||||| Sbjct 1003483 GAAGATCTGCAT 1003472 Score = 82.4 bits (90), Expect = 9e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 || || ||||| ||||| || | | ||| || | || || |||||||| |||||||| Sbjct 1003434 TCTTTCTGAATGTTGTAGTCGGATAAAGTGCGGCCATCTTCAAGCTGCTTTCCAGCGAAG 1003375 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || | ||||||||||| | || | || ||| |||| | ||| | |||| | ||| Sbjct 1003374 ATCAAACGCTGCTGGTCAGGTGGAATGCCCTCTTTGT-CTTGAATCTTTGACTTCACGTT 1003316 Query 43113 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||| || ||||| |||| ||||| || ||||| || || ||||| || Sbjct 1003315 GTCGATGGTGTCTGAAGACTCCACCTCGAGGGTGATAGTCTTGCCAGTGAGGGTCTTGAC 1003256 Query 43172 AAAGATTTGCAT 43183 || || ||||| Sbjct 1003255 GAAAATCTGCAT 1003244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571817256909440